Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 1.4e-81 306.2 157 100.0
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 1.6e-80 302.8 157 98.7
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.0e-79 300.1 157 97.5
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 5.1e-79 297.7 157 97.5
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 5.1e-79 297.7 157 97.5
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 7.1e-73 277.3 159 91.8
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 3.0e-71 271.9 157 93.0
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 1.6e-69 266.2 157 89.8
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 2.8e-69 265.4 158 91.1
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 9.0e-68 260.4 160 88.1
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 5.8e-67 257.7 159 88.1
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 9.7e-62 240.4 160 82.5
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 1.8e-60 236.1 159 79.2
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 7.9e-56 220.7 162 75.3
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 2.8e-53 212.2 157 73.9
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.1e-52 210.3 161 71.4
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.4e-52 209.9 135 84.4
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.4e-52 209.9 157 72.6
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 1.8e-52 209.5 148 75.0
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.8e-52 209.5 158 72.8
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 2.4e-52 209.1 163 73.0
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.4e-52 209.1 163 73.0
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.4e-52 209.1 163 73.0
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 2.4e-52 209.1 157 73.2
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 3.1e-52 208.8 163 71.2
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 4.1e-52 208.4 126 84.9
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 4.1e-52 208.4 157 73.9
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 4.1e-52 208.4 160 72.5
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 5.3e-52 208.0 146 74.7
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 6.9e-52 207.6 157 73.2
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.2e-51 206.8 157 72.6
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 1.2e-51 206.8 160 75.0
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 1.5e-51 206.5 158 74.1
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.5e-51 206.5 162 71.6
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 2.0e-51 206.1 157 72.6
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.6e-51 205.7 158 72.8
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 2.6e-51 205.7 157 72.0
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 2.6e-51 205.7 160 71.9
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 2.6e-51 205.7 157 71.3
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 2.6e-51 205.7 160 72.5
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 3.4e-51 205.3 158 72.2
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 3.4e-51 205.3 131 84.0
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 3.4e-51 205.3 153 73.9
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 161 70.8
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 4.5e-51 204.9 157 72.6
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 5.9e-51 204.5 116 91.4
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 5.9e-51 204.5 158 71.5
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 7.7e-51 204.1 159 73.6
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 7.7e-51 204.1 117 90.6
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 7.7e-51 204.1 161 72.7
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 7.7e-51 204.1 159 73.0
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.0e-50 203.8 117 88.9
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 1.0e-50 203.8 163 71.2
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.3e-50 203.4 116 89.7
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 1.7e-50 203.0 158 70.9
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.2e-50 202.6 157 69.4
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 2.9e-50 202.2 130 82.3
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 3.8e-50 201.8 116 90.5
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 5.0e-50 201.4 159 71.1
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 6.5e-50 201.1 163 68.1
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.5e-50 201.1 116 86.2
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 6.5e-50 201.1 160 71.9
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 8.5e-50 200.7 128 83.6
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 8.5e-50 200.7 136 77.9
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 8.5e-50 200.7 126 83.3
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 1.4e-49 199.9 160 70.6
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 1.4e-49 199.9 117 88.0
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 1.9e-49 199.5 157 71.3
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.5e-49 199.1 162 68.5
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.5e-49 199.1 136 77.2
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 4.2e-49 198.4 157 70.7
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 4.2e-49 198.4 157 70.1
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 7.2e-49 197.6 159 69.8
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 7.2e-49 197.6 158 69.0
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 9.4e-49 197.2 126 81.0
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 1.2e-48 196.8 157 70.1
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 1.6e-48 196.4 116 85.3
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 2.7e-48 195.7 115 86.1
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 6.1e-48 194.5 163 68.7
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 6.1e-48 194.5 116 85.3
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 3.0e-47 192.2 164 67.7
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 5.1e-47 191.4 127 78.7
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 5.1e-47 191.4 155 67.7
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 8.8e-47 190.7 125 80.8
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 1.1e-46 190.3 157 65.6
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 1.5e-46 189.9 116 87.9
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.3e-46 188.7 157 68.2
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.3e-46 188.7 157 68.2
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.5e-43 179.9 157 65.6
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 8.5e-42 174.1 116 73.3
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 2.3e-39 166.0 132 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 4.8e-37 158.3 117 69.2
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.4e-36 156.0 134 64.9
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 3.1e-36 155.6 104 73.1
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 7.0e-36 154.5 128 69.5
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 1.6e-35 153.3 122 69.7
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 3.5e-35 152.1 129 67.4
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 5.9e-35 151.4 126 66.7
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 1.3e-34 150.2 107 75.7
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 5.0e-34 148.3 127 66.9
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 6.5e-34 147.9 138 60.1
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 8.5e-34 147.5 133 66.2
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.1e-33 147.1 99 78.8
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 1.1e-33 147.1 128 65.6
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.1e-33 147.1 122 68.0
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 1.1e-33 147.1 129 64.3
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.2e-30 137.1 99 71.7
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.2e-29 132.9 140 55.7
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.3e-13 80.5 64 71.9
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 2.2e-13 79.7 134 41.0
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.6e-11 73.6 68 51.5


User provided reference genes

Program Settings