Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p19890 Brassica napus HOM05D006788 ORTHO05D008265 0.0e+00 1560.8 817 100.0
BraA09t37598Z Brassica rapa HOM05D006788 ORTHO05D008265 0.0e+00 1538.1 817 99.0
C09p25220 Brassica napus HOM05D006788 ORTHO05D008265 0.0e+00 1521.5 817 97.6
BcaC04g21980 Brassica carinata HOM05D006788 ORTHO05D008265 0.0e+00 1504.6 817 96.7
BolC9t55417H Brassica oleracea HOM05D006788 ORTHO05D008265 0.0e+00 1469.5 828 94.4
BcaB07g31060 Brassica carinata HOM05D006788 ORTHO05D008265 0.0e+00 1283.1 828 83.3
Sp2g07230 Schrenkiella parvula HOM05D006788 ORTHO05D008265 0.0e+00 1114.8 851 74.7
Thhalv10003405m.g Eutrema salsugineum HOM05D006788 ORTHO05D008265 6.1e-293 1010.7 860 68.5
AL8G18450 Arabidopsis lyrata HOM05D006788 ORTHO05D008265 2.9e-282 975.3 870 68.7
Carub.0008s0625 Capsella rubella HOM05D006788 ORTHO05D008265 2.9e-266 922.2 864 66.4
CARHR181620 Cardamine hirsuta HOM05D006788 ORTHO05D008265 1.5e-254 883.2 854 63.8
AT5G42710 Arabidopsis thaliana HOM05D006788 ORTHO05D008265 5.8e-251 871.3 856 63.2
Aa31LG9G12770 Aethionema arabicum HOM05D006788 ORTHO05D008265 7.3e-169 598.6 889 47.7
THA.LOC104798640 Tarenaya hassleriana HOM05D006788 ORTHO05D008265 1.0e-167 594.7 1046 42.8
THA.LOC104813209 Tarenaya hassleriana HOM05D006788 ORTHO05D008265 2.9e-101 374.0 880 35.6
COL.COLO4_26325 Corchorus olitorius HOM05D006788 ORTHO05D008265 1.0e-98 365.5 1089 31.8
Ciclev10018661m.g Citrus clementina HOM05D006788 ORTHO05D008265 8.8e-98 362.5 1043 32.4
Thecc.08G025800 Theobroma cacao HOM05D006788 ORTHO05D008265 2.0e-94 351.3 1088 31.5
Duzib093G0366 Durio zibethinus HOM05D006788 ORTHO05D008265 5.9e-94 349.7 1090 31.6
TWI56G0676 Tripterygium wilfordii HOM05D006788 ORTHO05D008265 2.2e-93 347.8 1091 31.2
TWI36G0908 Tripterygium wilfordii HOM05D006788 ORTHO05D008265 1.9e-92 344.7 1084 30.6
Manes.05G160500 Manihot esculenta HOM05D006788 ORTHO05D008265 4.2e-92 343.6 1081 31.2
Dinv36075 Davidia involucrata HOM05D006788 ORTHO05D008265 4.7e-91 340.1 1090 31.5
GSVIVG01009701001 Vitis vinifera HOM05D006788 ORTHO05D008265 2.3e-90 337.8 957 33.6
MD08G1035200 Malus domestica HOM05D006788 ORTHO05D008265 6.7e-90 336.3 978 32.6
Duzib116G0613 Durio zibethinus HOM05D006788 ORTHO05D008265 2.6e-89 334.3 1095 30.6
Gorai.010G010600 Gossypium raimondii HOM05D006788 ORTHO05D008265 5.7e-89 333.2 1094 30.7
QL02p008476 Quercus lobata HOM05D006788 ORTHO05D008265 5.7e-89 333.2 1090 29.9
Gohir.A06G010500 Gossypium hirsutum HOM05D006788 ORTHO05D008265 7.4e-89 332.8 1088 30.8
Potri.002G261700 Populus trichocarpa HOM05D006788 ORTHO05D008265 7.4e-89 332.8 1081 30.7
Gohir.D06G007900 Gossypium hirsutum HOM05D006788 ORTHO05D008265 1.7e-88 331.6 1086 30.9
Potri.014G185300 Populus trichocarpa HOM05D006788 ORTHO05D008265 3.7e-88 330.5 1101 30.3
Cfa018147 Carpinus fangiana HOM05D006788 ORTHO05D008265 6.3e-88 329.7 1018 31.4
Prupe.1G380200 Prunus persica HOM05D006788 ORTHO05D008265 1.8e-87 328.2 1020 31.5
Sabra14G0142000 Salix brachista HOM05D006788 ORTHO05D008265 3.1e-87 327.4 1094 30.8
RcHm_v2.0_Chr5g0052261 Rosa chinensis HOM05D006788 ORTHO05D008265 2.6e-86 324.3 976 30.8
Haze_17976 Corylus avellana HOM05D006788 ORTHO05D008265 5.0e-85 320.1 1035 30.5
FvH4_2g39870 Fragaria vesca HOM05D006788 ORTHO05D008265 1.0e-82 312.4 980 30.8
CiPaw.15G077700 Carya illinoinensis HOM05D006788 ORTHO05D008265 1.8e-82 311.6 1099 28.8
Nitab4.5_0009150g0020 Nicotiana tabacum HOM05D006788 ORTHO05D008265 4.4e-81 307.0 1078 29.7
FAN27G2706 Fragaria x ananassa HOM05D006788 ORTHO05D008265 1.3e-80 305.4 969 30.7
FAN20G0511 Fragaria x ananassa HOM05D006788 ORTHO05D008265 3.7e-80 303.9 991 29.7
Manes.18G027700 Manihot esculenta HOM05D006788 ORTHO05D008265 8.2e-80 302.8 1000 30.7
CSS0004157 Camellia sinensis var. sinensis HOM05D006788 ORTHO05D008265 1.8e-79 301.6 1067 29.9
MD15G1031800 Malus domestica HOM05D006788 ORTHO05D008265 1.6e-78 298.5 959 31.9
Cc10_g02940 Coffea canephora HOM05D006788 ORTHO05D008265 4.5e-78 297.0 1063 29.7
Lj4A785T32 Lonicera japonica HOM05D006788 ORTHO05D008265 1.9e-76 291.6 1017 29.2
Nitab4.5_0000110g0630 Nicotiana tabacum HOM05D006788 ORTHO05D008265 2.5e-76 291.2 1019 29.4
CANSAT25G0680 Cannabis sativa HOM05D006788 ORTHO05D008265 7.2e-76 289.7 1029 29.2
Gorai.005G107800 Gossypium raimondii HOM05D006788 ORTHO05D008265 2.3e-74 284.6 901 32.1
Gohir.A05G194600 Gossypium hirsutum HOM05D006788 ORTHO05D008265 4.0e-74 283.9 1014 30.6
Lsat_1_v5_gn_5_29160 Lactuca sativa HOM05D006788 ORTHO05D008265 5.2e-74 283.5 883 30.7
VMungo0251G0495 Vigna mungo HOM05D006788 ORTHO05D008265 1.2e-73 282.3 1037 29.7
Eucgr.F01564 Eucalyptus grandis HOM05D006788 ORTHO05D008265 9.8e-73 279.3 1051 28.8
Dinv39415 Davidia involucrata HOM05D006788 ORTHO05D008265 1.3e-72 278.9 1038 29.7
Glyma.05G248700 Glycine max HOM05D006788 ORTHO05D008265 1.3e-72 278.9 1059 30.0
Sopen04g033860 Solanum pennellii HOM05D006788 ORTHO05D008265 3.7e-72 277.3 1069 28.7
TAR381G0400 Trochodendron aralioides HOM05D006788 ORTHO05D008265 4.8e-72 276.9 1028 29.6
Solyc04g080270.4 Solanum lycopersicum HOM05D006788 ORTHO05D008265 1.1e-71 275.8 1065 28.8
vmacro21636 Vaccinium macrocarpon HOM05D006788 ORTHO05D008265 3.1e-71 274.2 1079 30.0
ClCG05G019050 Citrullus lanatus HOM05D006788 ORTHO05D008265 5.4e-71 273.5 1091 28.0
Peaxi162Scf00417g01019 Petunia axillaris HOM05D006788 ORTHO05D008265 1.2e-70 272.3 1089 28.1
Glyma.08G057300 Glycine max HOM05D006788 ORTHO05D008265 3.5e-70 270.8 1062 29.0
PGR083G0386 Punica granatum HOM05D006788 ORTHO05D008265 5.9e-70 270.0 945 29.9
Rhsim06G0034200 Rhododendron simsii HOM05D006788 ORTHO05D008265 5.9e-70 270.0 1048 29.6
arahy.Tifrunner.gnm1.ann1.50JV45 Arachis hypogaea HOM05D006788 ORTHO05D008265 7.7e-70 269.6 1028 29.9
PGSC0003DMG400005137 Solanum tuberosum HOM05D006788 ORTHO05D008265 1.7e-69 268.5 1080 28.1
MELO3C003844.2 Cucumis melo HOM05D006788 ORTHO05D008265 3.8e-69 267.3 1099 27.1
Medtr8g107730 Medicago truncatula HOM05D006788 ORTHO05D008265 5.0e-69 266.9 911 30.8
arahy.Tifrunner.gnm1.ann1.HV2TRI Arachis hypogaea HOM05D006788 ORTHO05D008265 1.1e-68 265.8 1022 29.3
Hma1.2p1_0203F.1_g086400 Hydrangea macrophylla HOM05D006788 ORTHO05D008265 3.2e-68 264.2 1013 28.8
Nn5g29585 Nelumbo nucifera HOM05D006788 ORTHO05D008265 4.2e-68 263.8 1061 27.7
CsaV3_3G045060 Cucumis sativus L. HOM05D006788 ORTHO05D008265 9.4e-68 262.7 1093 26.0
TPR.G1461 Trifolium pratense HOM05D006788 ORTHO05D008265 3.6e-67 260.8 919 31.3
Phvul.002G333000 Phaseolus vulgaris HOM05D006788 ORTHO05D008265 3.0e-66 257.7 1064 28.0
DCAR_008759 Daucus carota HOM05D006788 ORTHO05D008265 6.3e-64 250.0 1024 28.0
Gorai.009G202800 Gossypium raimondii HOM05D006788 ORTHO05D008265 1.1e-63 249.2 1028 30.1
Gohir.A03G078650 Gossypium hirsutum HOM05D006788 ORTHO05D008265 5.4e-63 246.9 901 30.4
LjContig00484g0028229 Lotus japonicus HOM05D006788 ORTHO05D008265 1.6e-62 245.4 1088 27.3
ECA246G4903 Erigeron canadensis HOM05D006788 ORTHO05D008265 2.0e-62 245.0 873 29.9
Ah.08g219690 Amaranthus hybridus HOM05D006788 ORTHO05D008265 8.6e-61 239.6 1000 27.3
AUR62007432 Chenopodium quinoa HOM05D006788 ORTHO05D008265 1.0e-58 232.6 1041 26.8
AUR62027306 Chenopodium quinoa HOM05D006788 ORTHO05D008265 3.4e-57 227.6 1051 27.0
SGA_v2.0_scaffold326G48711 Striga asiatica HOM05D006788 ORTHO05D008265 4.4e-57 227.3 975 26.5
MBI16_g34334_MAGBIO Magnolia biondii HOM05D006788 ORTHO05D008265 8.3e-56 223.0 1071 26.4
MSTRG.24293 Avicennia marina HOM05D006788 ORTHO05D008265 5.4e-55 220.3 1007 26.8
Aqoxy5G01647 Aquilegia oxysepala HOM05D006788 ORTHO05D008265 5.9e-54 216.9 1051 26.5
Cpa.g.sc36.70 Carica papaya HOM05D006788 ORTHO05D008265 1.0e-53 216.1 208 53.4
HanXRQChr05g0151911 Helianthus annuus HOM05D006788 ORTHO05D008265 1.0e-53 216.1 910 26.5
Migut.N00496 Erythranthe guttata HOM05D006788 ORTHO05D008265 5.0e-53 213.8 891 27.9
PSO700G0053 Papaver somniferum HOM05D006788 ORTHO05D008265 4.3e-52 210.7 1013 26.9
Sc15g0006920 Simmondsia chinensis HOM05D000020 ORTHO05D008265 8.0e-51 206.5 829 27.0
Ca_17169_v3 Cicer arietinum L. HOM05D005071 ORTHO05D006069 1.5e-49 202.2 819 28.8
Gohir.D05G197766 Gossypium hirsutum HOM05D006788 ORTHO05D008265 2.6e-49 201.4 936 28.0
PSO081G0175 Papaver somniferum HOM05D006788 ORTHO05D008265 1.2e-43 182.6 1037 25.1
RcHm_v2.0_Chr6g0300941 Rosa chinensis HOM05D006788 ORTHO05D008265 2.1e-43 181.8 197 49.7
Actinidia22550 Actinidia chinensis HOM05D006788 ORTHO05D008265 4.7e-43 180.6 895 28.4
Atru.chr13.488 Acer truncatum HOM05D006788 ORTHO05D008265 1.2e-41 176.0 427 35.4
CSS0005112 Camellia sinensis var. sinensis HOM05D006788 ORTHO05D008265 3.2e-39 167.9 672 29.0
Cpa.g.sc36.71 Carica papaya HOM05D006788 ORTHO05D008265 7.8e-38 163.3 768 27.2
Actinidia15324 Actinidia chinensis HOM05D006788 ORTHO05D008265 1.6e-35 155.6 337 36.5
Atru.chr13.490 Acer truncatum HOM05D006788 ORTHO05D008265 8.1e-35 153.3 118 61.0
Sed0005360 Sechium edule HOM05D006788 ORTHO05D008265 3.8e-32 144.4 554 30.7
Hma1.2p1_2195F.1_g316830 Hydrangea macrophylla HOM05D006788 ORTHO05D008265 1.1e-31 142.9 157 51.6
Psat7g000480 Pisum sativum HOM05D006788 ORTHO05D008265 4.1e-31 141.0 362 35.1
Lalb_Chr05g0221391 Lupinus albus HOM05D006788 ORTHO05D008265 2.4e-26 125.2 534 27.5
ATR0733G187 Amborella trichopoda HOM05D006788 ORTHO05D008265 4.9e-24 117.5 632 24.5
HPP92_019509 Vanilla planifolia HOM05D006788 ORTHO05D008265 6.6e-21 107.1 986 20.8
Duzib041G0403 Durio zibethinus HOM05D006788 ORTHO05D008265 4.8e-19 100.9 375 30.7
Zm00001eb213730 Zea mays HOM05D006788 ORTHO05D008265 8.1e-19 100.1 956 22.0
Os03g0775700 Oryza sativa ssp. japonica HOM05D006788 ORTHO05D008265 4.0e-18 97.8 969 22.8
CDE07G1328 Ceratophyllum demersum HOM05D006788 ORTHO05D008265 1.3e-16 92.8 180 31.7
C04p25240 Brassica napus HOM05D006788 ORTHO05D008265 2.4e-15 88.6 171 40.4
ATR0315G161 Amborella trichopoda HOM05D005593 ORTHO05D006515 1.6e-14 85.9 172 30.2
Gorai.010G072700 Gossypium raimondii HOM05D005593 ORTHO05D006515 3.5e-14 84.7 166 30.7
Rhsim01G0100000 Rhododendron simsii HOM05D005593 ORTHO05D006515 4.6e-14 84.3 183 33.3
MD15G1182400 Malus domestica HOM05D005593 ORTHO05D006515 7.9e-14 83.6 782 22.6
Gohir.D06G062400 Gossypium hirsutum HOM05D005593 ORTHO05D006515 1.3e-13 82.8 166 30.1
Gohir.A06G063700 Gossypium hirsutum HOM05D005593 ORTHO05D006515 3.0e-13 81.6 166 30.7
Rhsim01G0099500 Rhododendron simsii HOM05D005593 ORTHO05D006515 8.7e-13 80.1 189 33.3
PSO832G1383 Papaver somniferum HOM05D005593 ORTHO05D006515 1.1e-12 79.7 193 28.5
Cc06_g09850 Coffea canephora HOM05D005593 ORTHO05D006515 1.9e-12 79.0 174 28.7
Gohir.D07G006300 Gossypium hirsutum HOM05D005593 ORTHO05D006515 1.6e-11 75.9 713 24.0
Duzib150G1551 Durio zibethinus HOM05D005593 ORTHO05D006515 2.8e-11 75.1 166 31.3
Duzib187G0236 Durio zibethinus HOM05D005593 ORTHO05D006515 2.8e-11 75.1 166 30.7
TAR383G0262 Trochodendron aralioides HOM05D005593 ORTHO05D006515 2.8e-11 75.1 403 22.3
TPR.G10037 Trifolium pratense HOM05D005593 ORTHO05D006515 3.6e-11 74.7 171 30.4
Gorai.001G005900 Gossypium raimondii HOM05D005593 ORTHO05D006515 4.8e-11 74.3 721 23.3
Dinv41619 Davidia involucrata HOM05D005593 ORTHO05D006515 8.1e-11 73.6 870 22.3
TWI63G0748 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 8.1e-11 73.6 231 27.3
CSS0003686 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 1.4e-10 72.8 172 33.7
Gohir.A07G005700 Gossypium hirsutum HOM05D005593 ORTHO05D006515 2.4e-10 72.0 324 25.3
HanXRQChr12g0355541 Helianthus annuus HOM05D000246 ORTHO05D008363 6.9e-10 70.5 719 21.3
CSS0038657 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 1.2e-09 69.7 172 33.7
CDE04G2912 Ceratophyllum demersum HOM05D006788 ORTHO05D008265 5.8e-09 67.4 221 32.1
Peaxi162Scf00207g01317 Petunia axillaris HOM05D005593 ORTHO05D006515 9.9e-09 66.6 779 21.2
unitig_578.g16070 Utricularia gibba HOM05D006788 ORTHO05D008265 1.7e-08 65.9 862 21.3
TWI34G0072 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 2.2e-08 65.5 165 29.7
Sed0013092 Sechium edule HOM05D005593 ORTHO05D006515 6.4e-08 63.9 737 21.7
Ciclev10007444m.g Citrus clementina HOM05D005593 ORTHO05D006515 3.2e-07 61.6 859 20.6
Ah.09g231030 Amaranthus hybridus HOM05D005593 ORTHO05D006515 4.2e-07 61.2 191 27.2
Phvul.004G165100 Phaseolus vulgaris HOM05D005593 ORTHO05D006515 5.5e-07 60.8 210 26.2
Lalb_Chr14g0371581 Lupinus albus HOM05D005593 ORTHO05D006515 2.1e-06 58.9 336 23.2
Os01g0228800 Oryza sativa ssp. japonica HOM05D042755 ORTHO05D006515 3.5e-06 58.2 183 27.3
Prupe.7G233100 Prunus persica HOM05D005593 ORTHO05D006515 7.9e-06 57.0 779 22.0
vmacro20713 Vaccinium macrocarpon HOM05D005593 ORTHO05D006515 7.9e-06 57.0 437 23.8


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