Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 1.7e-54 215.7 104 100.0
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 8.4e-54 213.4 104 99.0
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 98.1
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 98.1
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 98.1
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 97.1
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 1.6e-52 209.1 104 97.1
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 6.0e-52 207.2 104 96.2
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.7e-51 205.7 104 95.2
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 1.1e-50 203.0 104 93.3
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 2.1e-49 198.7 104 91.3
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 4.8e-49 197.6 104 90.4
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 6.2e-49 197.2 104 90.4
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 1.4e-48 196.1 104 91.3
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 4.4e-47 191.0 104 85.6
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 6.6e-43 177.2 96 85.4
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 1.1e-42 176.4 96 83.3
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 1.5e-42 176.0 96 84.4
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 1.9e-42 175.6 96 83.3
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 1.9e-42 175.6 96 84.4
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 3.3e-42 174.9 94 86.2
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 7.3e-42 173.7 94 85.1
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 9.6e-42 173.3 96 83.3
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 9.6e-42 173.3 96 83.3
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 9.6e-42 173.3 96 83.3
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 1.3e-41 172.9 93 84.9
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.3e-41 172.9 96 82.3
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 2.1e-41 172.2 94 84.0
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 2.8e-41 171.8 94 83.0
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 2.8e-41 171.8 96 82.3
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 2.8e-41 171.8 96 83.3
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 2.8e-41 171.8 96 81.2
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 3.6e-41 171.4 96 84.4
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 3.6e-41 171.4 94 84.0
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 4.8e-41 171.0 94 81.9
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 6.2e-41 170.6 96 81.2
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 6.2e-41 170.6 96 79.2
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 6.2e-41 170.6 94 81.9
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 6.2e-41 170.6 94 81.9
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 8.1e-41 170.2 96 81.2
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 1.1e-40 169.9 94 81.9
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 1.4e-40 169.5 94 81.9
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 1.8e-40 169.1 96 80.2
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 2.4e-40 168.7 94 83.0
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 2.4e-40 168.7 96 81.2
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 2.4e-40 168.7 94 81.9
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 82.3
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 79.2
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 4.0e-40 167.9 95 82.1
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 80.2
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 80.2
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 81.2
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 5.3e-40 167.5 96 81.2
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 6.9e-40 167.2 96 81.2
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 6.9e-40 167.2 96 81.2
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 6.9e-40 167.2 96 80.2
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 6.9e-40 167.2 96 79.2
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 9.0e-40 166.8 96 78.1
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 9.0e-40 166.8 96 79.2
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 1.2e-39 166.4 96 79.2
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 1.2e-39 166.4 94 77.7
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 2.0e-39 165.6 96 78.1
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 2.0e-39 165.6 96 78.1
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 2.0e-39 165.6 96 78.1
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 2.0e-39 165.6 96 78.1
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 2.0e-39 165.6 96 78.1
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 2.0e-39 165.6 96 78.1
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 2.0e-39 165.6 98 78.6
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 2.6e-39 165.2 96 78.1
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 4.5e-39 164.5 96 79.2
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 7.6e-39 163.7 96 78.1
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 7.6e-39 163.7 96 78.1
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 7.6e-39 163.7 93 80.6
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 79.2
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 9.9e-39 163.3 93 81.7
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 77.1
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 78.1
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 79.2
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 77.1
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 1.7e-38 162.5 93 79.6
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 1.7e-38 162.5 93 79.6
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 2.2e-38 162.2 96 77.1
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 2.9e-38 161.8 96 77.1
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 2.9e-38 161.8 96 77.1
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 2.9e-38 161.8 96 76.0
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 2.9e-38 161.8 96 76.0
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 3.8e-38 161.4 96 77.1
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 6.4e-38 160.6 94 77.7
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 6.4e-38 160.6 94 75.5
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 6.4e-38 160.6 94 77.7
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 8.4e-38 160.2 96 77.1
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 8.4e-38 160.2 96 75.0
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 1.9e-37 159.1 96 76.0
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 4.2e-37 157.9 96 76.0
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 5.4e-37 157.5 90 78.9
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 7.1e-37 157.1 96 75.0
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 1.6e-36 156.0 96 75.0
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 7.9e-36 153.7 96 69.8
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 7.9e-36 153.7 94 76.6
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 1.0e-35 153.3 93 76.3
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 1.3e-35 152.9 94 74.5
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 1.3e-35 152.9 94 74.5
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 1.8e-35 152.5 111 68.5
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 3.0e-35 151.8 129 60.5
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 5.1e-35 151.0 119 64.7
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 5.1e-35 151.0 119 64.7
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 5.1e-35 151.0 119 64.7
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 1.9e-34 149.1 96 72.9
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 2.5e-34 148.7 114 63.2
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 3.1e-32 141.7 96 71.9
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 3.1e-32 141.7 139 52.5
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 3.1e-32 141.7 139 52.5
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 2.0e-31 139.0 84 73.8
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 9.3e-29 130.2 96 66.7
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 3.5e-28 128.3 72 80.6
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 7.6e-23 110.5 94 54.3
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 6.5e-22 107.5 93 53.8
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 1.6e-17 92.8 50 80.0
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 1.6e-17 92.8 50 80.0
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 6.3e-17 90.9 50 78.0
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 2.6e-15 85.5 59 66.1
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 7.7e-15 84.0 49 77.6
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 7.7e-15 84.0 53 71.7
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 6.5e-14 80.9 47 76.6
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 1.1e-13 80.1 39 97.4
Potri.013G002301 Populus trichocarpa HOM05D006309 ORTHO05D007937 1.8e-08 62.8 41 73.2


User provided reference genes

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