Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p18170 Brassica napus HOM05D000142 ORTHO05D102357 2.6e-43 178.3 90 100.0
C09p22640 Brassica napus HOM05D000142 ORTHO05D042490 1.8e-12 75.9 38 92.1
BolC9t55181H Brassica oleracea HOM05D000142 ORTHO05D042490 1.8e-12 75.9 38 92.1
A09p17750 Brassica napus HOM05D000142 ORTHO05D008707 2.2e-10 68.9 37 91.9
A09p17760 Brassica napus HOM05D000142 ORTHO05D008707 2.2e-10 68.9 37 91.9
C09p22100 Brassica napus HOM05D000142 ORTHO05D008707 2.2e-10 68.9 37 91.9
BolC9t55123H Brassica oleracea HOM05D000142 ORTHO05D008707 2.2e-10 68.9 37 91.9
BraA09t37407Z Brassica rapa HOM05D000142 ORTHO05D008707 2.2e-10 68.9 37 91.9
BcaB07g31197 Brassica carinata HOM05D000142 ORTHO05D008707 4.9e-10 67.8 37 89.2
BcaC04g22208 Brassica carinata HOM05D000142 ORTHO05D008707 1.1e-09 66.6 37 89.2
AL2G16690 Arabidopsis lyrata HOM05D000142 ORTHO05D008707 1.4e-09 66.2 37 86.5
AT1G60000 Arabidopsis thaliana HOM05D000142 ORTHO05D008707 1.4e-09 66.2 37 86.5
Thhalv10023650m.g Eutrema salsugineum HOM05D000142 ORTHO05D008707 1.4e-09 66.2 37 86.5
Sp2g04580 Schrenkiella parvula HOM05D000142 ORTHO05D008707 3.2e-09 65.1 37 86.5
Carub.0002s0524 Capsella rubella HOM05D000142 ORTHO05D008707 7.1e-09 63.9 35 85.7
Potri.010G065600 Populus trichocarpa HOM05D000142 ORTHO05D008707 9.3e-09 63.5 37 81.1
CARHR052980 Cardamine hirsuta HOM05D000142 ORTHO05D008707 1.2e-08 63.2 37 81.1
TWI53G0893 Tripterygium wilfordii HOM05D000142 ORTHO05D008707 1.2e-08 63.2 35 82.9
ATR0665G535 Amborella trichopoda HOM05D000142 ORTHO05D008707 1.6e-08 62.8 35 80.0
DCAR_030763 Daucus carota HOM05D000142 ORTHO05D008707 2.1e-08 62.4 37 81.1
FvH4_4g04650 Fragaria vesca HOM05D000142 ORTHO05D008707 2.1e-08 62.4 37 78.4
FAN12G0039 Fragaria x ananassa HOM05D000142 ORTHO05D008707 2.1e-08 62.4 37 78.4
FAN17G0298 Fragaria x ananassa HOM05D000142 ORTHO05D008707 2.1e-08 62.4 37 78.4
FAN22G1925 Fragaria x ananassa HOM05D000142 ORTHO05D008707 2.1e-08 62.4 37 78.4
RcHm_v2.0_Chr4g0395451 Rosa chinensis HOM05D000142 ORTHO05D008707 2.1e-08 62.4 37 78.4
CiPaw.01G177800 Carya illinoinensis HOM05D000142 ORTHO05D008707 2.7e-08 62.0 37 78.4
Hma1.2p1_0385F.1_g141580 Hydrangea macrophylla HOM05D000142 ORTHO05D008707 4.6e-08 61.2 37 75.7
Sabra08G0131400 Salix brachista HOM05D000142 ORTHO05D008707 4.6e-08 61.2 37 78.4
CANSAT78G1664 Cannabis sativa HOM05D000142 ORTHO05D008707 6.0e-08 60.8 35 77.1
Dinv27114 Davidia involucrata HOM05D000142 ORTHO05D008707 6.0e-08 60.8 37 75.7
Migut.G00576 Erythranthe guttata HOM05D000142 ORTHO05D008707 6.0e-08 60.8 37 75.7
Prupe.1G048800 Prunus persica HOM05D000142 ORTHO05D008707 6.0e-08 60.8 37 75.7
GSVIVG01027917001 Vitis vinifera HOM05D000142 ORTHO05D008707 6.0e-08 60.8 37 75.7
Ciclev10005487m.g Citrus clementina HOM05D000142 ORTHO05D008707 7.8e-08 60.5 37 75.7
Sc25g0004820 Simmondsia chinensis HOM05D000142 ORTHO05D008707 7.8e-08 60.5 37 75.7
THA.LOC104820371 Tarenaya hassleriana HOM05D000142 ORTHO05D008707 7.8e-08 60.5 35 80.0
Potri.008G172100 Populus trichocarpa HOM05D000142 ORTHO05D008707 1.0e-07 60.1 37 75.7
Cfa014785 Carpinus fangiana HOM05D000142 ORTHO05D008707 1.3e-07 59.7 37 73.0
PSO017G3166 Papaver somniferum HOM05D000142 ORTHO05D008707 1.3e-07 59.7 37 75.7
EL10Ac3g06671 Beta vulgaris HOM05D000142 ORTHO05D008707 1.7e-07 59.3 37 73.0
CiPaw.02G106800 Carya illinoinensis HOM05D000142 ORTHO05D008707 1.7e-07 59.3 37 73.0
CDE05G1401 Ceratophyllum demersum HOM05D000142 ORTHO05D008707 1.7e-07 59.3 37 73.0
CDE11G0470 Ceratophyllum demersum HOM05D000142 ORTHO05D008707 1.7e-07 59.3 37 73.0
Duzib151G0723 Durio zibethinus HOM05D000142 ORTHO05D008707 2.3e-07 58.9 37 73.0
arahy.Tifrunner.gnm1.ann1.6KMR2U Arachis hypogaea HOM05D000142 ORTHO05D008707 3.9e-07 58.2 37 73.0
Cc03_g06360 Coffea canephora HOM05D000142 ORTHO05D008707 3.9e-07 58.2 35 71.4
Lalb_Chr08g0245371 Lupinus albus HOM05D000142 ORTHO05D008707 3.9e-07 58.2 37 73.0
MD16G1226600 Malus domestica HOM05D000142 ORTHO05D008707 3.9e-07 58.2 37 70.3
PGR031G0844 Punica granatum HOM05D000142 ORTHO05D008707 3.9e-07 58.2 37 70.3
PGR031G1075 Punica granatum HOM05D000142 ORTHO05D008707 3.9e-07 58.2 37 70.3
Haze_11461 Corylus avellana HOM05D000142 ORTHO05D008707 5.1e-07 57.8 37 70.3
QL06p021032 Quercus lobata HOM05D000142 ORTHO05D008707 5.1e-07 57.8 35 71.4
arahy.Tifrunner.gnm1.ann1.H5FPK5 Arachis hypogaea HOM05D000142 ORTHO05D008707 6.6e-07 57.4 37 73.0
Eucgr.H00128 Eucalyptus grandis HOM05D000142 ORTHO05D008707 6.6e-07 57.4 37 73.0
Oeu011219.1 Olea europaea HOM05D000142 ORTHO05D008707 6.6e-07 57.4 35 71.4
PSO063G2892 Papaver somniferum HOM05D000142 ORTHO05D008707 6.6e-07 57.4 37 70.3
Aqoxy2G03748 Aquilegia oxysepala HOM05D000142 ORTHO05D008707 8.7e-07 57.0 35 68.6
Glyma.20G082800 Glycine max HOM05D000142 ORTHO05D008707 8.7e-07 57.0 37 70.3
Lalb_Chr23g0267081 Lupinus albus HOM05D000142 ORTHO05D008707 8.7e-07 57.0 37 67.6
TAR362G1001 Trochodendron aralioides HOM05D000142 ORTHO05D008707 1.1e-06 56.6 35 71.4
Manes.15G045900 Manihot esculenta HOM05D000142 ORTHO05D008707 1.5e-06 56.2 37 70.3
Os02g0815200 Oryza sativa ssp. japonica HOM05D000142 ORTHO05D008707 1.5e-06 56.2 35 71.4
Lalb_Chr11g0062571 Lupinus albus HOM05D000142 ORTHO05D008707 1.9e-06 55.8 37 67.6
Nn1g02963 Nelumbo nucifera HOM05D000142 ORTHO05D008707 2.5e-06 55.5 35 71.4
Zm00001eb258730 Zea mays HOM05D000142 ORTHO05D008707 2.5e-06 55.5 35 65.7
Lj6g0019999 Lotus japonicus HOM05D000142 ORTHO05D008707 3.3e-06 55.1 37 67.6
MBI07_g23233_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D008707 3.3e-06 55.1 35 71.4
Thecc.04G265200 Theobroma cacao HOM05D000142 ORTHO05D008707 3.3e-06 55.1 37 70.3
VMungo0720G0303 Vigna mungo HOM05D000142 ORTHO05D008707 3.3e-06 55.1 37 67.6
Aa31LG2G10220 Aethionema arabicum HOM05D000142 ORTHO05D008707 4.3e-06 54.7 37 70.3
COL.COLO4_15969 Corchorus olitorius HOM05D000142 ORTHO05D008707 4.3e-06 54.7 37 70.3
Dinv29802 Davidia involucrata HOM05D000142 ORTHO05D008707 4.3e-06 54.7 37 73.0
CSS0014702 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D008707 5.6e-06 54.3 37 67.6
Glyma.10G134100 Glycine max HOM05D000142 ORTHO05D008707 5.6e-06 54.3 37 64.9
Gohir.A02G043100 Gossypium hirsutum HOM05D000142 ORTHO05D008707 5.6e-06 54.3 37 67.6
Gohir.D02G048800 Gossypium hirsutum HOM05D000142 ORTHO05D008707 5.6e-06 54.3 37 67.6
Gorai.005G054000 Gossypium raimondii HOM05D000142 ORTHO05D008707 5.6e-06 54.3 37 67.6
CsaV3_3G011660 Cucumis sativus L. HOM05D000142 ORTHO05D008707 7.3e-06 53.9 35 71.4
Lsat_1_v5_gn_2_41261 Lactuca sativa HOM05D000142 ORTHO05D008707 7.3e-06 53.9 35 68.6
Actinidia20839 Actinidia chinensis HOM05D000142 ORTHO05D008707 9.6e-06 53.5 37 70.3
ECA238G2020 Erigeron canadensis HOM05D000142 ORTHO05D008707 9.6e-06 53.5 35 71.4


User provided reference genes

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