Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p17680 Brassica napus HOM05D024172 ORTHO05D024522 1.2e-42 176.0 83 100.0
BraA09t37396Z Brassica rapa HOM05D024172 ORTHO05D024522 1.5e-42 175.6 83 98.8
BNapus_Darmor_BZH_scaffold_155p00070 Brassica napus HOM05D024172 ORTHO05D024522 2.6e-42 174.9 83 98.8
C09p22020 Brassica napus HOM05D024172 ORTHO05D024522 2.6e-42 174.9 83 98.8
BolC9t55107H Brassica oleracea HOM05D024172 ORTHO05D024522 2.6e-42 174.9 83 98.8
AT3G05727 Arabidopsis thaliana HOM05D011267 ORTHO05D013190 2.2e-09 65.5 79 41.8
AL5G42110 Arabidopsis lyrata HOM05D007338 ORTHO05D009406 2.9e-09 65.1 80 47.5
BolC1t05675H Brassica oleracea HOM05D011267 ORTHO05D013190 5.0e-09 64.3 79 41.8
BraA01t04490Z Brassica rapa HOM05D011267 ORTHO05D013190 6.5e-09 63.9 79 41.8
AT3G59930 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.1e-08 63.2 80 46.2
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.9e-08 62.4 81 43.2
AT5G33355 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 5.5e-08 60.8 80 45.0
C04p48140 Brassica napus HOM05D007338 ORTHO05D009406 1.2e-07 59.7 95 40.0
BolC4t26404H Brassica oleracea HOM05D007338 ORTHO05D009406 1.2e-07 59.7 95 40.0
A04p14100 Brassica napus HOM05D007338 ORTHO05D009406 6.1e-07 57.4 95 37.9
BraA04t17071Z Brassica rapa HOM05D007338 ORTHO05D009406 6.1e-07 57.4 95 37.9
Carub.0005s1076 Capsella rubella HOM05D007338 ORTHO05D009406 8.0e-07 57.0 82 42.7
BcaB06g27588 Brassica carinata HOM05D007338 ORTHO05D009406 1.0e-06 56.6 95 37.9
BcaB06g27589 Brassica carinata HOM05D007338 ORTHO05D009406 1.0e-06 56.6 95 37.9
BcaC07g40398 Brassica carinata HOM05D007338 ORTHO05D009406 1.4e-06 56.2 91 44.0
CARHR080190 Cardamine hirsuta HOM05D011267 ORTHO05D013190 1.4e-06 56.2 79 40.5
Sp4g10780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.8e-06 55.8 93 38.7
BcaC09g49309 Brassica carinata HOM05D007338 ORTHO05D009406 6.8e-06 53.9 78 41.0
C01p38060 Brassica napus HOM05D007338 ORTHO05D009406 6.8e-06 53.9 78 41.0
BcaC06g31805 Brassica carinata HOM05D007338 ORTHO05D009406 8.8e-06 53.5 80 43.8


User provided reference genes

Program Settings