Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p16530 Brassica napus HOM05D000161 ORTHO05D000111 2.5e-56 221.9 112 100.0
BraA09t37290Z Brassica rapa HOM05D000161 ORTHO05D000111 1.6e-42 176.0 97 94.8
BcaC04g22370 Brassica carinata HOM05D000161 ORTHO05D000111 1.1e-38 163.3 97 90.7
C09p20080 Brassica napus HOM05D000161 ORTHO05D000111 1.1e-38 163.3 97 90.7
BolC9t54916H Brassica oleracea HOM05D000161 ORTHO05D000111 1.1e-38 163.3 97 90.7
BcaB07g31302 Brassica carinata HOM05D000161 ORTHO05D000111 4.5e-37 157.9 92 89.1
AL2G13790 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.1e-22 108.6 103 62.1
AL2G13390 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.6e-21 105.5 101 64.4
C01p39210 Brassica napus HOM05D000161 ORTHO05D000111 4.5e-21 104.8 95 64.2
Thhalv10023461m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 5.9e-21 104.4 98 65.3
AT1G62120 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.0e-20 103.6 103 62.1
BraA09t37293Z Brassica rapa HOM05D000161 ORTHO05D000111 2.2e-20 102.4 96 63.5
A06p20610 Brassica napus HOM05D000161 ORTHO05D000111 3.8e-20 101.7 90 64.4
AT3G46950 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 6.5e-20 100.9 116 56.9
AL5G26170 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 8.5e-20 100.5 100 62.0
A09p13110 Brassica napus HOM05D000161 ORTHO05D000111 8.5e-20 100.5 94 64.9
Carub.0002s0291 Capsella rubella HOM05D000161 ORTHO05D000111 8.5e-20 100.5 100 58.0
C03p71120 Brassica napus HOM05D000161 ORTHO05D000111 1.1e-19 100.1 97 63.9
BraA09t36957Z Brassica rapa HOM05D000161 ORTHO05D000111 1.1e-19 100.1 94 64.9
BcaC04g22764 Brassica carinata HOM05D000161 ORTHO05D000111 1.5e-19 99.8 94 63.8
C09p15550 Brassica napus HOM05D000161 ORTHO05D000111 1.5e-19 99.8 94 63.8
CARHR049980 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.5e-19 99.8 102 60.8
AL2G14060 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.9e-19 99.4 97 61.9
BraA06t25140Z Brassica rapa HOM05D000161 ORTHO05D000111 1.9e-19 99.4 96 64.6
Thhalv10023447m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.9e-19 99.4 116 54.3
A09p16570 Brassica napus HOM05D000161 ORTHO05D000111 2.5e-19 99.0 96 62.5
Carub.0002s0311 Capsella rubella HOM05D000161 ORTHO05D000111 3.2e-19 98.6 104 61.5
Carub.0002s0309 Capsella rubella HOM05D000161 ORTHO05D000111 4.2e-19 98.2 104 61.5
BcaB07g31297 Brassica carinata HOM05D000161 ORTHO05D000111 7.2e-19 97.4 97 57.7
BolC3t19397H Brassica oleracea HOM05D000161 ORTHO05D000111 7.2e-19 97.4 97 62.9
CARHR050290 Cardamine hirsuta HOM05D000161 ORTHO05D000111 7.2e-19 97.4 102 59.8
Sp2g02600 Schrenkiella parvula HOM05D000161 ORTHO05D000111 7.2e-19 97.4 99 59.6
AT1G62490 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 9.4e-19 97.1 104 59.6
A03p44330 Brassica napus HOM05D000161 ORTHO05D000111 9.4e-19 97.1 98 62.2
Carub.0002s0300 Capsella rubella HOM05D000161 ORTHO05D000111 9.4e-19 97.1 100 59.0
BcaC04g22364 Brassica carinata HOM05D000161 ORTHO05D000111 1.6e-18 96.3 101 56.4
A01p30850 Brassica napus HOM05D000161 ORTHO05D000111 1.6e-18 96.3 96 61.5
C09p20140 Brassica napus HOM05D000161 ORTHO05D000111 1.6e-18 96.3 101 56.4
BolC9t54920H Brassica oleracea HOM05D000161 ORTHO05D000111 1.6e-18 96.3 101 56.4
Carub.0002s0308 Capsella rubella HOM05D000161 ORTHO05D000111 1.6e-18 96.3 99 62.6
Sp5g14790 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.7e-18 95.5 96 62.5
BraA03t13562Z Brassica rapa HOM05D000161 ORTHO05D000111 3.6e-18 95.1 98 61.2
A09p16550 Brassica napus HOM05D000161 ORTHO05D000111 4.7e-18 94.7 94 60.6
CARHR050320 Cardamine hirsuta HOM05D000161 ORTHO05D000111 4.7e-18 94.7 100 57.0
BcaB07g31296 Brassica carinata HOM05D000161 ORTHO05D000111 6.1e-18 94.4 97 60.8
AT1G61980 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 8.0e-18 94.0 96 58.3
CARHR050020 Cardamine hirsuta HOM05D000161 ORTHO05D000111 8.0e-18 94.0 102 60.8
Thhalv10004187m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.0e-18 94.0 106 59.4
Thhalv10023457m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.0e-18 94.0 103 60.2
CARHR050310 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.4e-17 93.2 99 57.6
AT1G62085 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.3e-17 92.4 102 54.9
BcaB07g31298 Brassica carinata HOM05D000161 ORTHO05D000111 2.3e-17 92.4 97 56.7
Sp2g02560 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.3e-17 92.4 99 56.6
AL2G13770 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.0e-17 92.0 101 57.4
AL2G14070 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 4.0e-17 91.7 96 56.2
AT1G61970 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 4.0e-17 91.7 98 61.2
CARHR050280 Cardamine hirsuta HOM05D000161 ORTHO05D000111 5.2e-17 91.3 99 58.6
Sp2g02100 Schrenkiella parvula HOM05D000161 ORTHO05D000111 5.2e-17 91.3 107 56.1
AL2G14050 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 6.7e-17 90.9 102 59.8
BcaB04g20385 Brassica carinata HOM05D000161 ORTHO05D000111 6.7e-17 90.9 100 57.0
CARHR050220 Cardamine hirsuta HOM05D000161 ORTHO05D000111 6.7e-17 90.9 95 62.1
Thhalv10019750m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 6.7e-17 90.9 106 56.6
AT1G62150 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 8.8e-17 90.5 101 59.4
Thhalv10024167m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.8e-17 90.5 109 56.0
AL2G14080 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.2e-16 90.1 100 57.0
BcaC04g22763 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-16 90.1 96 61.5
C09p15560 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-16 90.1 96 61.5
BolC9t54461H Brassica oleracea HOM05D000161 ORTHO05D000111 1.2e-16 90.1 96 61.5
Sp2g02570 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.5e-16 89.7 99 55.6
AL2G13820 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.0e-16 89.4 107 52.3
CARHR155600 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.0e-16 89.4 99 57.6
Aa31LG2G8900 Aethionema arabicum HOM05D000316 ORTHO05D000111 2.6e-16 89.0 102 57.8
CARHR050060 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.6e-16 89.0 100 60.0
AT1G61960 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 4.4e-16 88.2 95 58.9
Carub.0002s0310 Capsella rubella HOM05D000161 ORTHO05D000111 4.4e-16 88.2 102 56.9
Thhalv10023838m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.4e-16 88.2 106 52.8
Sp2g02110 Schrenkiella parvula HOM05D000161 ORTHO05D000111 4.4e-16 88.2 104 57.7
Thhalv10024090m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 5.7e-16 87.8 101 54.5
CARHR050160 Cardamine hirsuta HOM05D000161 ORTHO05D000111 9.7e-16 87.0 104 54.8
Sp2g23340 Schrenkiella parvula HOM05D000161 ORTHO05D000111 9.7e-16 87.0 104 59.6
C09p20130 Brassica napus HOM05D000161 ORTHO05D000111 1.3e-15 86.7 109 49.5
BcaC06g31881 Brassica carinata HOM05D000161 ORTHO05D000111 1.7e-15 86.3 111 55.0
A09p16580 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-15 86.3 97 54.6
CARHR050330 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.7e-15 86.3 102 53.9
CARHR189630 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.7e-15 86.3 110 56.4
AT1G61990 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.2e-15 85.9 99 57.6
Thhalv10023470m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.2e-15 85.9 110 55.5
Sp2g02550 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.8e-15 85.5 104 52.9
AT1G62110 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 3.7e-15 85.1 97 54.6
BcaC04g22366 Brassica carinata HOM05D000161 ORTHO05D000111 3.7e-15 85.1 94 56.4
C09p20120 Brassica napus HOM05D000161 ORTHO05D000111 3.7e-15 85.1 94 56.4
BraA01t03212Z Brassica rapa HOM05D000161 ORTHO05D000111 3.7e-15 85.1 95 54.7
A09p13120 Brassica napus HOM05D000161 ORTHO05D000111 4.8e-15 84.7 97 59.8
BraA09t36958Z Brassica rapa HOM05D000161 ORTHO05D000111 4.8e-15 84.7 97 59.8
BcaC01g03302 Brassica carinata HOM05D000161 ORTHO05D000111 6.3e-15 84.3 101 55.4
BolC3t17658H Brassica oleracea HOM05D000161 ORTHO05D000111 6.3e-15 84.3 101 55.4
BcaC02g10507 Brassica carinata HOM05D000161 ORTHO05D000111 8.2e-15 84.0 99 57.6
C04p28130 Brassica napus HOM05D000161 ORTHO05D000111 8.2e-15 84.0 99 57.6
BolC4t24356H Brassica oleracea HOM05D000161 ORTHO05D000111 8.2e-15 84.0 99 57.6
Thhalv10024133m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.2e-15 84.0 104 56.7
BcaC06g31879 Brassica carinata HOM05D000161 ORTHO05D000111 1.1e-14 83.6 114 51.8
Carub.0002s0295 Capsella rubella HOM05D000161 ORTHO05D000111 1.4e-14 83.2 101 53.5
AL2G14110 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.8e-14 82.8 102 57.8
BcaC02g10522 Brassica carinata HOM05D000161 ORTHO05D000111 1.8e-14 82.8 97 53.6
C04p27930 Brassica napus HOM05D000161 ORTHO05D000111 1.8e-14 82.8 97 53.6
BolC4t24337H Brassica oleracea HOM05D000161 ORTHO05D000111 1.8e-14 82.8 97 53.6
A01p30840 Brassica napus HOM05D000161 ORTHO05D000111 2.4e-14 82.4 96 54.2
C01p39190 Brassica napus HOM05D000161 ORTHO05D000111 2.4e-14 82.4 96 54.2
BolC1t03869H Brassica oleracea HOM05D000161 ORTHO05D000111 2.4e-14 82.4 96 54.2
CARHR049990 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.1e-14 82.0 115 49.6
Thhalv10023472m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.1e-14 82.0 98 58.2
AL2G14090 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 4.1e-14 81.6 93 57.0
Carub.0002s0249 Capsella rubella HOM05D000161 ORTHO05D000111 4.1e-14 81.6 98 56.1
Thhalv10023467m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.1e-14 81.6 105 52.4
BcaC02g10512 Brassica carinata HOM05D000161 ORTHO05D000111 9.1e-14 80.5 116 48.3
C04p28060 Brassica napus HOM05D000161 ORTHO05D000111 9.1e-14 80.5 116 48.3
BolC4t24350H Brassica oleracea HOM05D000161 ORTHO05D000111 9.1e-14 80.5 116 48.3
Thhalv10023445m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 9.1e-14 80.5 98 56.1
Thhalv10024124m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 9.1e-14 80.5 99 53.5
AL1G66000 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.2e-13 80.1 103 53.4
Carub.0002s0306 Capsella rubella HOM05D000161 ORTHO05D000111 1.6e-13 79.7 107 51.4
CARHR050000 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.6e-13 79.7 115 47.8
BcaB08g34472 Brassica carinata HOM05D000161 ORTHO05D000111 2.0e-13 79.3 88 58.0
Thhalv10023868m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.7e-13 79.0 110 54.5
A03p67410 Brassica napus HOM05D000161 ORTHO05D000111 3.5e-13 78.6 93 55.9
BraA01t02734Z Brassica rapa HOM05D000161 ORTHO05D000111 3.5e-13 78.6 93 55.9
BcaC04g22367 Brassica carinata HOM05D000161 ORTHO05D000111 4.5e-13 78.2 78 59.0
A03p67460 Brassica napus HOM05D000161 ORTHO05D000111 4.5e-13 78.2 96 52.1
BraA01t02725Z Brassica rapa HOM05D000161 ORTHO05D000111 4.5e-13 78.2 96 52.1
A09p16240 Brassica napus HOM05D000161 ORTHO05D000111 1.0e-12 77.0 92 60.9
C09p20110 Brassica napus HOM05D000161 ORTHO05D000111 1.0e-12 77.0 78 57.7
BcaB07g31299 Brassica carinata HOM05D000161 ORTHO05D000111 1.3e-12 76.6 92 52.2
BcaC06g31903 Brassica carinata HOM05D000161 ORTHO05D000111 1.3e-12 76.6 94 54.3
Carub.0002s0305 Capsella rubella HOM05D000161 ORTHO05D000111 1.3e-12 76.6 100 49.0
BcaC04g22407 Brassica carinata HOM05D000161 ORTHO05D000111 1.7e-12 76.3 92 55.4
C09p19700 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-12 76.3 92 55.4
Thhalv10023915m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.7e-12 76.3 95 51.6
AL2G13840 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.2e-12 75.9 91 52.7
AL6G35250 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.2e-12 75.9 109 53.2
AT5G23930 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.9e-12 75.5 105 53.3
BcaB07g31330 Brassica carinata HOM05D000161 ORTHO05D000111 2.9e-12 75.5 75 64.0
Sp7g03520 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.9e-12 75.5 101 54.5
AL2G14100 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 8.5e-12 73.9 85 57.6
BolC9t54872H Brassica oleracea HOM05D000161 ORTHO05D000111 8.5e-12 73.9 92 54.3
Thhalv10023505m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.5e-12 73.9 102 52.9
Thhalv10024039m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.1e-11 73.6 102 51.0
BraA09t37261Z Brassica rapa HOM05D000161 ORTHO05D000111 1.9e-11 72.8 92 56.5
BcaC06g31876 Brassica carinata HOM05D000161 ORTHO05D000111 2.5e-11 72.4 97 48.5
A01p30830 Brassica napus HOM05D000161 ORTHO05D000111 9.4e-11 70.5 95 50.5
BraA01t03211Z Brassica rapa HOM05D000161 ORTHO05D000111 9.4e-11 70.5 95 50.5
Carub.0006s2165 Capsella rubella HOM05D000161 ORTHO05D000111 9.4e-11 70.5 111 47.7
BcaB04g20384 Brassica carinata HOM05D000161 ORTHO05D000111 2.7e-10 68.9 96 54.2
BcaC04g22365 Brassica carinata HOM05D000161 ORTHO05D000111 3.6e-10 68.6 80 51.2
BcaC06g31880 Brassica carinata HOM05D000161 ORTHO05D000111 4.7e-10 68.2 82 52.4
AL2G13900 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.0e-09 67.0 55 65.5
BcaNung01197 Brassica carinata HOM05D000161 ORTHO05D000111 1.8e-09 66.2 111 44.1
A06p34730 Brassica napus HOM05D000161 ORTHO05D000111 4.0e-09 65.1 105 41.0
C03p54760 Brassica napus HOM05D000161 ORTHO05D000111 5.2e-09 64.7 65 61.5
BcaNung01835 Brassica carinata HOM05D000161 ORTHO05D000111 6.8e-09 64.3 103 46.6
C07p43750 Brassica napus HOM05D000161 ORTHO05D000111 6.8e-09 64.3 103 46.6
BolC7t44904H Brassica oleracea HOM05D000161 ORTHO05D000111 6.8e-09 64.3 103 46.6
BraA06t26401Z Brassica rapa HOM05D000161 ORTHO05D000111 6.8e-09 64.3 103 40.8
BolC3t17768H Brassica oleracea HOM05D000161 ORTHO05D000111 8.8e-09 63.9 95 50.5
BcaC01g03202 Brassica carinata HOM05D000161 ORTHO05D000111 2.6e-08 62.4 95 49.5
AL2G13930 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 9.8e-08 60.5 102 50.0
AL2G13950 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.8e-07 58.9 115 44.3
Thhalv10028140m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.8e-07 58.9 56 62.5
AT1G62010 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.8e-06 56.2 94 48.9
AL2G21920 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 9.1e-06 53.9 114 43.9
Thhalv10023979m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 9.1e-06 53.9 92 48.9


User provided reference genes

Program Settings