Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 3.9e-116 421.4 201 100.0
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 2.5e-107 392.1 189 100.0
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-84 316.6 178 86.5
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 7.5e-59 231.1 188 60.1
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 6.6e-47 191.4 164 61.0
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 4.0e-44 182.2 191 47.1
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.4e-41 173.7 174 52.9
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-38 164.1 146 58.9
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 3.1e-36 156.0 157 50.3
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 3.1e-36 156.0 157 50.3
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-35 154.1 173 47.4
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-33 146.7 159 49.1
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.1e-32 143.3 185 45.9
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.7e-31 140.2 171 44.4
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.1e-31 138.7 193 44.6
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.3e-30 135.6 172 43.0
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 9.5e-30 134.4 178 45.5
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.8e-29 132.9 186 41.9
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.8e-29 132.9 155 48.4
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 6.2e-29 131.7 172 42.4
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 8.1e-29 131.3 174 42.5
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 1.4e-28 130.6 191 45.5
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 8.9e-28 127.9 157 43.9
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 8.9e-28 127.9 172 41.3
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 2.0e-27 126.7 166 41.0
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 3.8e-26 122.5 152 46.1
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 6.4e-26 121.7 142 44.4
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-25 120.9 94 64.9
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-25 120.9 185 38.4
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.8e-24 114.8 185 39.5
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.7e-23 113.6 183 37.2
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.3e-23 113.2 195 40.0
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 3.0e-23 112.8 186 38.2
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 6.6e-23 111.7 186 37.6
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.1e-22 110.9 177 36.7
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 1.9e-22 110.2 194 38.1
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.6e-21 107.1 176 39.2
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-21 106.7 151 41.1
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 2.1e-21 106.7 176 39.2
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.1e-20 104.4 178 38.2
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-20 104.4 171 38.6
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.8e-20 103.6 201 35.8
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 6.9e-20 101.7 164 37.2
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 6.9e-20 101.7 193 36.3
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 6.9e-20 101.7 193 36.3
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-19 100.5 193 35.8
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 2.6e-19 99.8 171 35.7
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 7.6e-19 98.2 189 33.9
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 9.9e-19 97.8 151 39.1
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 9.9e-19 97.8 151 39.1
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.3e-18 97.4 192 34.9
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 1.7e-18 97.1 159 36.5
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 1.7e-18 97.1 184 35.3
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-18 96.7 151 39.1
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-18 96.7 150 38.7
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-18 96.7 186 36.6
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.2e-18 96.7 151 39.1
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 2.9e-18 96.3 177 34.5
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 2.9e-18 96.3 195 35.4
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.8e-18 95.9 172 34.3
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-17 94.4 159 37.1
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-17 94.4 181 33.1
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-17 94.4 186 35.5
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-17 94.0 175 35.4
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-17 93.6 166 36.1
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 2.4e-17 93.2 129 37.2
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 3.2e-17 92.8 150 36.0
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 3.2e-17 92.8 143 36.4
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 3.2e-17 92.8 143 36.4
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 3.2e-17 92.8 151 37.7
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 3.2e-17 92.8 141 37.6
C09p18860 Brassica napus HOM05D007210 ORTHO05D006152 5.4e-17 92.0 157 38.2
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 9.3e-17 91.3 151 36.4
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.2e-16 90.9 171 36.3
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.7e-16 89.7 190 33.2
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 4.6e-16 89.0 112 48.2
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 4.6e-16 89.0 119 42.0
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 6.0e-16 88.6 116 41.4
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-15 87.8 175 33.7
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-15 87.0 191 32.5
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 2.3e-15 86.7 169 35.5
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 2.3e-15 86.7 169 35.5
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 3.9e-15 85.9 138 36.2
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 3.9e-15 85.9 151 35.8
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 6.6e-15 85.1 108 44.4
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 4.3e-14 82.4 141 36.9
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 2.8e-13 79.7 138 36.2
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 3.6e-13 79.3 177 32.2
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-12 77.8 132 36.4
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 2.0e-11 73.6 128 36.7
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 2.6e-11 73.2 128 34.4
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 3.4e-11 72.8 140 35.0
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 3.4e-11 72.8 128 36.7
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 4.5e-11 72.4 140 35.7
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 4.5e-11 72.4 140 35.7
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 5.8e-11 72.0 138 32.6
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 7.6e-11 71.6 140 35.7
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 7.6e-11 71.6 140 35.7
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.3e-10 70.9 151 29.1
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.7e-10 70.5 138 32.6
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 1.7e-10 70.5 140 35.0
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 1.7e-10 70.5 140 35.0
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 1.7e-10 70.5 154 32.5
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 1.7e-10 70.5 140 35.0
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-10 70.1 119 38.7
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 4.9e-10 68.9 140 33.6
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 6.4e-10 68.6 140 34.3
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 8.4e-10 68.2 150 32.7
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 1.1e-09 67.8 129 34.1
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-09 67.4 150 32.7
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.9e-09 67.0 112 38.4
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 1.9e-09 67.0 141 34.0
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 2.4e-09 66.6 128 30.5
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.4e-09 66.6 115 33.9
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.4e-09 66.6 139 34.5
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 4.2e-09 65.9 94 38.3
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 9.3e-09 64.7 113 31.9
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.2e-08 64.3 107 32.7
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.6e-08 63.9 183 26.8
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 6.0e-08 62.0 97 37.1
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 2.3e-07 60.1 119 31.9
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 5.1e-07 58.9 77 40.3
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 8.7e-07 58.2 127 29.9
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 8.7e-07 58.2 127 29.9
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 1.1e-06 57.8 127 29.1
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-06 56.2 151 31.1


User provided reference genes

Program Settings