Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p15030 Brassica napus HOM05D000935 ORTHO05D042010 2.2e-135 485.7 257 100.0
BraA09t37148Z Brassica rapa HOM05D000935 ORTHO05D042010 2.2e-135 485.7 257 100.0
A04p28790 Brassica napus HOM05D022358 ORTHO05D028328 3.4e-24 116.3 131 54.2
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 1.1e-22 111.3 133 50.4
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-22 108.6 133 48.9
A10p33690 Brassica napus HOM05D000313 ORTHO05D000065 6.1e-21 105.5 133 48.9
C08p06840 Brassica napus HOM05D000280 ORTHO05D003998 2.3e-20 103.6 133 48.9
BcaC06g34959 Brassica carinata HOM05D000935 ORTHO05D000065 3.0e-20 103.2 82 63.4
C02p20670 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-20 103.2 129 48.8
C09p12190 Brassica napus HOM05D000935 ORTHO05D009979 3.0e-20 103.2 88 67.0
C06p26830 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-20 102.4 135 45.2
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-20 102.1 133 48.1
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 6.7e-20 102.1 133 48.1
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-19 100.9 129 48.1
C03p29260 Brassica napus HOM05D000935 ORTHO05D009979 2.6e-19 100.1 82 69.5
C02p15100 Brassica napus HOM05D000935 ORTHO05D009979 1.3e-18 97.8 82 68.3
C04p49060 Brassica napus HOM05D000935 ORTHO05D009979 1.3e-18 97.8 82 67.1
C02p39360 Brassica napus HOM05D000935 ORTHO05D009979 1.7e-18 97.4 82 67.1
BolC2t09946H Brassica oleracea HOM05D000935 ORTHO05D009979 1.7e-18 97.4 82 67.1
C02p49460 Brassica napus HOM05D000935 ORTHO05D009979 2.2e-18 97.1 82 67.1
C08p26920 Brassica napus HOM05D000935 ORTHO05D009979 2.8e-18 96.7 82 67.1
BcaC01g00953 Brassica carinata HOM05D000935 ORTHO05D009979 4.8e-18 95.9 82 67.1
BcaC01g06322 Brassica carinata HOM05D000935 ORTHO05D009979 4.8e-18 95.9 82 65.9
C02p28160 Brassica napus HOM05D000935 ORTHO05D009979 4.8e-18 95.9 82 67.1
BolC3t20921H Brassica oleracea HOM05D000935 ORTHO05D009979 4.8e-18 95.9 82 67.1
BolC2t10491H Brassica oleracea HOM05D000935 ORTHO05D009979 6.3e-18 95.5 82 67.1
C06p43700 Brassica napus HOM05D000935 ORTHO05D009979 8.2e-18 95.1 82 67.1
C06p44520 Brassica napus HOM05D000935 ORTHO05D009979 8.2e-18 95.1 82 65.9
C07p53220 Brassica napus HOM05D000935 ORTHO05D009979 8.2e-18 95.1 82 67.1
C09p19580 Brassica napus HOM05D000935 ORTHO05D009979 1.4e-17 94.4 82 67.1
C09p58690 Brassica napus HOM05D000935 ORTHO05D009979 1.4e-17 94.4 82 65.9
BraA09t38816Z Brassica rapa HOM05D000935 ORTHO05D009979 1.8e-17 94.0 53 86.8
C02p41130 Brassica napus HOM05D000935 ORTHO05D009979 4.1e-17 92.8 79 67.1
BolC7t42585H Brassica oleracea HOM05D000935 ORTHO05D009979 9.1e-17 91.7 79 65.8
BolC1t00230H Brassica oleracea HOM05D000935 ORTHO05D009979 2.6e-16 90.1 82 63.4
BolC6t38710H Brassica oleracea HOM05D000935 ORTHO05D009979 2.6e-16 90.1 89 59.6
C06p04430 Brassica napus HOM05D000935 ORTHO05D009979 3.4e-16 89.7 82 63.4
C04p31050 Brassica napus HOM05D000935 ORTHO05D009979 5.9e-16 89.0 82 64.6
BolC3t17661H Brassica oleracea HOM05D000935 ORTHO05D010096 1.7e-15 87.4 130 44.6
BolC3t19050H Brassica oleracea HOM05D000935 ORTHO05D009979 3.8e-15 86.3 72 66.7
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-15 85.9 127 40.9
BolC4t26490H Brassica oleracea HOM05D000935 ORTHO05D009979 5.0e-15 85.9 66 72.7
C03p24890 Brassica napus HOM05D000935 ORTHO05D009979 8.5e-15 85.1 66 72.7
C05p49680 Brassica napus HOM05D000935 ORTHO05D010096 1.1e-14 84.7 77 63.6
BolC6t35936H Brassica oleracea HOM05D000935 ORTHO05D010096 1.9e-14 84.0 67 71.6
BolC9t54108H Brassica oleracea HOM05D000935 ORTHO05D009979 2.5e-14 83.6 66 71.2
C03p43710 Brassica napus HOM05D000935 ORTHO05D009979 3.2e-14 83.2 81 63.0
C03p86300 Brassica napus HOM05D000935 ORTHO05D009979 3.2e-14 83.2 66 71.2
C04p21050 Brassica napus HOM05D000935 ORTHO05D009979 3.2e-14 83.2 66 71.2
BolC4t23630H Brassica oleracea HOM05D000935 ORTHO05D010820 3.2e-14 83.2 66 71.2
A09p35480 Brassica napus HOM05D000305 ORTHO05D000065 4.2e-14 82.8 133 43.6
C03p45260 Brassica napus HOM05D000935 ORTHO05D009979 4.2e-14 82.8 66 69.7
C05p15390 Brassica napus HOM05D000935 ORTHO05D009979 4.2e-14 82.8 66 69.7
C06p14790 Brassica napus HOM05D000305 ORTHO05D000065 4.2e-14 82.8 135 43.7
BolC3t14516H Brassica oleracea HOM05D000935 ORTHO05D009979 4.2e-14 82.8 66 71.2
BolC3t16789H Brassica oleracea HOM05D000935 ORTHO05D010820 4.2e-14 82.8 66 69.7
BcaC01g02207 Brassica carinata HOM05D000313 ORTHO05D009979 5.5e-14 82.4 106 47.2
C09p44780 Brassica napus HOM05D000935 ORTHO05D009979 5.5e-14 82.4 66 69.7
A06p21660 Brassica napus HOM05D000305 ORTHO05D000065 7.2e-14 82.0 133 44.4
C02p57270 Brassica napus HOM05D000935 ORTHO05D009979 7.2e-14 82.0 66 69.7
BolC2t10125H Brassica oleracea HOM05D000935 ORTHO05D009979 7.2e-14 82.0 66 69.7
BolC2t11796H Brassica oleracea HOM05D000935 ORTHO05D009979 7.2e-14 82.0 66 69.7
BolC7t45817H Brassica oleracea HOM05D000935 ORTHO05D009979 7.2e-14 82.0 66 71.2
BcaB07g32488 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-14 81.6 132 40.9
BcaC03g16139 Brassica carinata HOM05D000935 ORTHO05D009979 9.4e-14 81.6 61 70.5
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 9.4e-14 81.6 134 42.5
C03p35450 Brassica napus HOM05D000935 ORTHO05D009979 9.4e-14 81.6 66 69.7
C09p55240 Brassica napus HOM05D000305 ORTHO05D000065 9.4e-14 81.6 136 44.9
C09p56870 Brassica napus HOM05D009598 ORTHO05D040253 9.4e-14 81.6 66 71.2
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 9.4e-14 81.6 134 44.0
A09p30430 Brassica napus HOM05D000313 ORTHO05D013032 1.2e-13 81.3 134 42.5
BolC9t58593H Brassica oleracea HOM05D000935 ORTHO05D009979 1.2e-13 81.3 64 70.3
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 1.6e-13 80.9 132 43.2
BolC8t46829H Brassica oleracea HOM05D000935 ORTHO05D009979 1.6e-13 80.9 66 69.7
C03p73610 Brassica napus HOM05D000935 ORTHO05D009979 2.1e-13 80.5 66 69.7
C02p43840 Brassica napus HOM05D000935 ORTHO05D009979 2.7e-13 80.1 66 68.2
C03p68070 Brassica napus HOM05D000935 ORTHO05D040406 2.7e-13 80.1 57 71.9
BolC3t19030H Brassica oleracea HOM05D000935 ORTHO05D040406 2.7e-13 80.1 57 71.9
BolC5t30568H Brassica oleracea HOM05D000935 ORTHO05D009979 2.7e-13 80.1 66 69.7
C05p06150 Brassica napus HOM05D000935 ORTHO05D009979 3.6e-13 79.7 56 76.8
C07p20550 Brassica napus HOM05D000935 ORTHO05D009979 3.6e-13 79.7 58 74.1
BolC2t09723H Brassica oleracea HOM05D000935 ORTHO05D009979 3.6e-13 79.7 66 69.7
C02p46390 Brassica napus HOM05D023488 ORTHO05D022087 4.7e-13 79.3 155 35.5
BolC8t47373H Brassica oleracea HOM05D000935 ORTHO05D009979 4.7e-13 79.3 66 66.7
BolC2t08024H Brassica oleracea HOM05D000935 ORTHO05D010820 6.1e-13 79.0 66 68.2
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 6.1e-13 79.0 134 42.5
BolC3t14107H Brassica oleracea HOM05D000935 ORTHO05D010096 7.9e-13 78.6 66 68.2
BolC4t25599H Brassica oleracea HOM05D000935 ORTHO05D009979 7.9e-13 78.6 66 68.2
BolC4t27538H Brassica oleracea HOM05D000935 ORTHO05D009979 7.9e-13 78.6 66 66.7
C01p20790 Brassica napus HOM05D000935 ORTHO05D009979 1.0e-12 78.2 56 75.0
C05p56530 Brassica napus HOM05D000935 ORTHO05D009979 1.0e-12 78.2 66 68.2
C07p19000 Brassica napus HOM05D000935 ORTHO05D009979 1.0e-12 78.2 66 66.7
BolC5t34318H Brassica oleracea HOM05D000935 ORTHO05D009979 1.0e-12 78.2 66 68.2
BolC7t42410H Brassica oleracea HOM05D000935 ORTHO05D009979 1.0e-12 78.2 66 66.7
BolC8t47526H Brassica oleracea HOM05D000280 ORTHO05D003998 1.0e-12 78.2 110 46.4
BolC9t57352H Brassica oleracea HOM05D000935 ORTHO05D009979 1.0e-12 78.2 66 68.2
C01p21550 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-12 77.4 133 40.6
BolC1t02075H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-12 77.4 133 40.6
C06p35860 Brassica napus HOM05D000935 ORTHO05D009979 3.0e-12 76.6 56 73.2
BolC5t29374H Brassica oleracea HOM05D000935 ORTHO05D010096 3.0e-12 76.6 68 64.7
BolC6t38936H Brassica oleracea HOM05D000935 ORTHO05D010096 3.0e-12 76.6 64 68.8
BolC9t57254H Brassica oleracea HOM05D008594 ORTHO05D010096 5.2e-12 75.9 139 40.3
BolC3t19654H Brassica oleracea HOM05D000935 ORTHO05D009979 6.7e-12 75.5 64 67.2
C06p32460 Brassica napus HOM05D000935 ORTHO05D009979 8.8e-12 75.1 61 67.2
BolC6t38369H Brassica oleracea HOM05D000935 ORTHO05D009979 8.8e-12 75.1 61 67.2
BolC7t43118H Brassica oleracea HOM05D000935 ORTHO05D009979 8.8e-12 75.1 52 78.8
C04p40230 Brassica napus HOM05D000935 ORTHO05D009979 1.1e-11 74.7 56 73.2
BolC6t35574H Brassica oleracea HOM05D000935 ORTHO05D009979 1.1e-11 74.7 65 64.6
C02p44460 Brassica napus HOM05D000935 ORTHO05D009979 1.5e-11 74.3 66 65.2
C02p52490 Brassica napus HOM05D000935 ORTHO05D010096 1.5e-11 74.3 66 66.7
C03p38350 Brassica napus HOM05D000935 ORTHO05D009979 2.0e-11 73.9 66 68.2
C03p73850 Brassica napus HOM05D000935 ORTHO05D010096 2.0e-11 73.9 51 80.4
C03p74050 Brassica napus HOM05D000935 ORTHO05D010096 2.0e-11 73.9 51 80.4
C09p43690 Brassica napus HOM05D000935 ORTHO05D009979 2.0e-11 73.9 66 66.7
BolC9t59210H Brassica oleracea HOM05D000935 ORTHO05D009979 2.0e-11 73.9 52 76.9
C03p38410 Brassica napus HOM05D000935 ORTHO05D010096 3.3e-11 73.2 66 68.2
BolC9t55393H Brassica oleracea HOM05D000935 ORTHO05D010096 4.4e-11 72.8 64 67.2
BraA08t33858Z Brassica rapa HOM05D022358 ORTHO05D028328 5.7e-11 72.4 151 37.1
BraA04t18356Z Brassica rapa HOM05D022358 ORTHO05D028328 7.4e-11 72.0 100 46.0
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 9.7e-11 71.6 127 36.2
C03p68240 Brassica napus HOM05D000935 ORTHO05D009979 1.3e-10 71.2 56 69.6
C06p08580 Brassica napus HOM05D000935 ORTHO05D009979 3.7e-10 69.7 56 69.6
BcaB07g33009 Brassica carinata HOM05D000313 ORTHO05D000065 8.2e-10 68.6 127 37.0
BolC8t46967H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-09 67.4 133 38.3
BolC2t08438H Brassica oleracea HOM05D000935 ORTHO05D106777 3.1e-09 66.6 43 86.0
BcaC04g20336 Brassica carinata HOM05D000935 ORTHO05D009979 7.7e-08 62.0 48 68.8
BolC9t58602H Brassica oleracea HOM05D000935 ORTHO05D010096 1.9e-06 57.4 49 65.3
C07p18850 Brassica napus HOM05D000935 ORTHO05D040682 2.5e-06 57.0 82 46.3
BolC7t42395H Brassica oleracea HOM05D000935 ORTHO05D040682 2.5e-06 57.0 82 46.3
BolC6t37857H Brassica oleracea HOM05D000313 ORTHO05D013032 5.5e-06 55.8 34 76.5
C07p49510 Brassica napus HOM05D000313 ORTHO05D013032 7.2e-06 55.5 34 73.5


User provided reference genes

Program Settings