Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 2.7e-124 448.7 239 100.0
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 1.8e-120 436.0 239 97.1
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 6.5e-118 427.6 245 94.3
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 3.7e-113 411.8 225 93.8
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 9.8e-90 334.0 192 89.6
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 6.3e-89 331.3 192 96.4
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 1.6e-76 290.0 174 87.9
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 2.0e-74 283.1 178 83.7
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 2.0e-74 283.1 180 82.8
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 1.3e-73 280.4 181 83.4
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 7.8e-71 271.2 181 79.0
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 9.9e-58 227.6 141 83.7
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 1.1e-53 214.2 141 78.7
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 4.3e-53 212.2 175 67.4
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 4.7e-52 208.8 141 78.7
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 8.4e-49 198.0 184 58.7
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 1.9e-48 196.8 178 63.5
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 2.4e-48 196.4 184 58.7
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-48 196.1 184 58.7
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 5.4e-48 195.3 153 66.7
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 7.1e-48 194.9 126 80.2
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 7.1e-48 194.9 184 59.2
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 1.2e-47 194.1 175 64.6
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 2.1e-47 193.4 121 78.5
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 2.1e-47 193.4 121 78.5
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 2.7e-47 193.0 168 63.1
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.5e-47 192.6 184 58.7
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 7.8e-47 191.4 164 64.6
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 1.0e-46 191.0 168 63.7
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 1.0e-46 191.0 128 78.9
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 1.3e-46 190.7 175 58.9
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 1.7e-46 190.3 168 63.1
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 2.3e-46 189.9 182 59.3
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 2.3e-46 189.9 103 90.3
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 3.0e-46 189.5 121 77.7
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 3.0e-46 189.5 150 68.7
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 5.1e-46 188.7 166 65.7
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 5.1e-46 188.7 162 67.9
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 6.6e-46 188.3 153 69.9
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 6.6e-46 188.3 155 67.1
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 6.6e-46 188.3 156 64.7
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 6.6e-46 188.3 103 89.3
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 8.7e-46 188.0 120 80.0
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 1.1e-45 187.6 116 81.0
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 1.1e-45 187.6 174 63.2
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 1.5e-45 187.2 177 61.0
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 2.5e-45 186.4 169 62.1
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 3.3e-45 186.0 121 76.9
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 3.3e-45 186.0 177 59.3
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 3.3e-45 186.0 166 65.1
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 4.3e-45 185.7 121 81.0
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 4.3e-45 185.7 126 77.8
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 7.3e-45 184.9 155 68.4
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 7.3e-45 184.9 158 63.9
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 1.2e-44 184.1 109 85.3
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 1.2e-44 184.1 157 67.5
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 1.2e-44 184.1 135 72.6
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 1.6e-44 183.7 110 82.7
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 2.1e-44 183.3 123 78.0
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 2.8e-44 183.0 164 62.2
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 3.6e-44 182.6 110 84.5
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 3.6e-44 182.6 110 84.5
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 4.7e-44 182.2 133 72.2
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 4.7e-44 182.2 143 69.9
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 4.7e-44 182.2 146 67.8
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 6.2e-44 181.8 150 66.0
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 6.2e-44 181.8 103 86.4
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 6.2e-44 181.8 103 86.4
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 6.2e-44 181.8 138 69.6
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 1.1e-43 181.0 157 65.0
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 1.1e-43 181.0 110 83.6
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 1.1e-43 181.0 175 58.9
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.4e-43 180.6 171 62.0
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 1.4e-43 180.6 109 81.7
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 1.8e-43 180.3 177 56.5
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 3.1e-43 179.5 124 76.6
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 4.0e-43 179.1 127 73.2
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 4.0e-43 179.1 123 74.8
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 5.2e-43 178.7 153 64.7
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 6.9e-43 178.3 164 62.2
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 9.0e-43 177.9 178 59.0
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 9.0e-43 177.9 151 63.6
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 9.0e-43 177.9 107 81.3
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 1.2e-42 177.6 124 73.4
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 2.0e-42 176.8 171 57.3
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 2.6e-42 176.4 177 57.6
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 2.6e-42 176.4 104 85.6
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 7.6e-42 174.9 127 75.6
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 9.9e-42 174.5 139 67.6
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 1.7e-41 173.7 132 71.2
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 2.2e-41 173.3 177 58.2
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 2.2e-41 173.3 107 80.4
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 3.8e-41 172.6 154 63.0
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 8.4e-41 171.4 103 84.5
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 1.1e-40 171.0 201 51.7
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 2.4e-40 169.9 128 71.1
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 4.2e-40 169.1 161 60.2
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 5.4e-40 168.7 108 76.9
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 5.4e-40 168.7 105 79.0
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 7.8e-39 164.9 106 77.4
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 1.0e-38 164.5 102 81.4
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 1.7e-38 163.7 83 97.6
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 3.9e-38 162.5 168 56.5
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 1.9e-37 160.2 109 75.2
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 7.3e-37 158.3 126 66.7
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 3.4e-34 149.4 165 52.7
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 3.2e-32 142.9 151 57.0
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 5.4e-32 142.1 180 49.4
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 1.6e-31 140.6 108 65.7
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 9.6e-29 131.3 74 86.5
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 9.6e-29 131.3 101 72.3
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 1.5e-26 124.0 123 58.5
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 1.7e-25 120.6 129 54.3
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 4.9e-25 119.0 112 59.8
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 4.2e-24 115.9 110 60.0
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 1.6e-23 114.0 130 55.4
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 3.5e-23 112.8 65 80.0
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 8.7e-22 108.2 109 56.9
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 9.6e-21 104.8 69 73.9
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 3.1e-19 99.8 77 67.5
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 3.0e-14 83.2 97 51.5
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 3.0e-14 83.2 111 47.7
Lj2C170T10 Lonicera japonica HOM05D006501 ORTHO05D008241 5.1e-14 82.4 44 88.6
ECA233G1307 Erigeron canadensis HOM05D006501 ORTHO05D008241 6.7e-14 82.0 46 84.8
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 9.7e-13 78.2 48 75.0
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 1.3e-12 77.8 60 70.0
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 6.9e-11 72.0 98 43.9
RcHm_v2.0_Chr6g0301591 Rosa chinensis HOM05D001075 ORTHO05D008241 7.7e-10 68.6 61 62.3
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 2.9e-09 66.6 113 38.1


User provided reference genes

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