Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p12760 Brassica napus HOM05D012015 ORTHO05D014750 0.0e+00 1080.9 529 100.0
BraA09t36920Z Brassica rapa HOM05D012015 ORTHO05D014750 3.8e-288 994.2 535 93.1
BcaC04g22814 Brassica carinata HOM05D012015 ORTHO05D014750 3.0e-264 914.8 541 87.4
C09p15130 Brassica napus HOM05D012015 ORTHO05D014750 1.1e-263 912.9 536 87.7
BcaNung04097 Brassica carinata HOM05D012015 ORTHO05D014750 5.9e-212 741.1 553 76.9
Sp3g33480 Schrenkiella parvula HOM05D012015 ORTHO05D014750 2.7e-188 662.5 565 67.6
Thhalv10001946m.g Eutrema salsugineum HOM05D012015 ORTHO05D014750 1.0e-168 597.4 560 63.8
CARHR110740 Cardamine hirsuta HOM05D012015 ORTHO05D014750 3.4e-159 565.8 559 60.5
AL3G47840 Arabidopsis lyrata HOM05D012015 ORTHO05D014750 5.4e-157 558.5 560 59.8
Carub.0003s3458 Capsella rubella HOM05D012015 ORTHO05D014750 6.8e-144 515.0 600 54.5
AT2G20250 Arabidopsis thaliana HOM05D012015 ORTHO05D014750 3.8e-142 509.2 514 58.9
Aa31LG8G17240 Aethionema arabicum HOM05D012015 ORTHO05D014750 5.1e-91 339.3 550 45.6
THA.LOC104814711 Tarenaya hassleriana HOM05D012015 ORTHO05D014750 7.7e-71 272.3 550 41.3
Gorai.001G235700 Gossypium raimondii HOM05D009210 ORTHO05D010367 4.3e-13 80.5 490 25.7
Duzib211G0683 Durio zibethinus HOM05D009210 ORTHO05D010367 7.3e-13 79.7 560 25.4
QL09p043802 Quercus lobata HOM05D009210 ORTHO05D010367 9.6e-13 79.3 509 25.5
QL07p009176 Quercus lobata HOM05D009210 ORTHO05D010367 8.1e-12 76.3 509 26.1
QL09p043508 Quercus lobata HOM05D009210 ORTHO05D010367 8.1e-12 76.3 509 26.1
Gohir.A07G202550 Gossypium hirsutum HOM05D009210 ORTHO05D010367 1.4e-11 75.5 511 25.6
BolC2t11511H Brassica oleracea HOM05D012015 ORTHO05D011383 2.6e-10 71.2 55 65.5
QL09p043653 Quercus lobata HOM05D009210 ORTHO05D010367 3.4e-10 70.9 415 27.5
FvH4_2g19950 Fragaria vesca HOM05D016859 ORTHO05D010367 4.5e-10 70.5 212 30.7
FAN24G1655 Fragaria x ananassa HOM05D016859 ORTHO05D010367 5.8e-10 70.1 215 30.2
BcaC07g36866 Brassica carinata HOM05D012015 ORTHO05D011383 1.3e-09 68.9 59 61.0
Ciclev10019870m.g Citrus clementina HOM05D009210 ORTHO05D010367 2.9e-09 67.8 322 24.5
Actinidia30107 Actinidia chinensis HOM05D009210 ORTHO05D010367 4.9e-09 67.0 211 31.8
FAN27G2643 Fragaria x ananassa HOM05D016859 ORTHO05D010367 4.2e-08 63.9 242 27.3
Gohir.D07G208750 Gossypium hirsutum HOM05D009210 ORTHO05D010367 4.2e-08 63.9 371 26.7
Lj5g0020428 Lotus japonicus HOM05D014010 ORTHO05D010367 4.2e-08 63.9 280 27.9
Cpa.g.sc8.212 Carica papaya HOM05D009210 ORTHO05D010367 9.3e-08 62.8 135 34.8
BolC8t49341H Brassica oleracea HOM05D004186 ORTHO05D011383 1.2e-07 62.4 55 63.6
FAN15G1208 Fragaria x ananassa HOM05D016859 ORTHO05D010367 1.2e-07 62.4 242 26.4
Thecc.01G245200 Theobroma cacao HOM05D009210 ORTHO05D010367 5.1e-06 57.0 426 25.4
Lalb_Chr02g0152931 Lupinus albus HOM05D014010 ORTHO05D010367 6.7e-06 56.6 222 29.7
Hund18342 Selenicereus undatus HOM05D017699 ORTHO05D019543 8.7e-06 56.2 235 28.9


User provided reference genes

Program Settings