Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 9.6e-172 606.7 293 100.0
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 2.4e-170 602.1 293 99.0
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 2.4e-170 602.1 293 99.0
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 4.0e-170 601.3 293 98.6
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 3.4e-169 598.2 296 98.3
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 1.2e-166 589.7 293 96.2
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 1.2e-166 589.7 293 96.2
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 2.7e-166 588.6 293 95.9
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 3.5e-166 588.2 293 95.9
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 3.5e-166 588.2 293 95.9
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 3.5e-166 588.2 293 95.2
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 1.3e-165 586.3 293 95.6
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 1.7e-165 585.9 293 95.6
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 3.0e-165 585.1 293 95.2
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 3.0e-165 585.1 293 95.2
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 5.1e-165 584.3 293 95.6
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 2.1e-163 578.9 293 93.9
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 1.1e-162 576.6 293 94.2
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 1.4e-162 576.2 293 94.2
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 2.4e-162 575.5 293 93.2
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 7.6e-161 570.5 293 92.2
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 2.9e-160 568.5 293 92.5
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 7.1e-159 563.9 293 91.5
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 2.0e-153 545.8 293 87.7
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 4.6e-150 534.6 293 84.3
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 1.6e-142 509.6 293 82.3
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 1.8e-141 506.1 293 82.6
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 2.3e-141 505.8 293 81.9
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 8.7e-141 503.8 293 80.2
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 1.1e-140 503.4 291 81.4
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 4.3e-140 501.5 293 80.2
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 9.7e-140 500.4 293 80.5
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 2.2e-139 499.2 293 81.2
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 3.7e-139 498.4 291 80.4
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 4.8e-139 498.0 291 80.4
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 4.8e-139 498.0 293 81.2
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 6.3e-139 497.7 293 80.2
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 1.4e-138 496.5 291 80.4
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 5.3e-138 494.6 294 78.6
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 6.9e-138 494.2 293 79.9
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 1.2e-137 493.4 294 78.6
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.5e-137 491.5 299 77.9
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.5e-137 491.5 299 77.9
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 1.3e-136 490.0 294 77.9
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 1.7e-136 489.6 293 79.2
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 5.0e-136 488.0 299 77.6
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 5.0e-136 488.0 299 77.6
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.1e-135 486.9 293 79.2
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.1e-135 486.9 293 78.8
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 1.1e-135 486.9 293 78.8
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 1.4e-135 486.5 293 78.8
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 1.9e-135 486.1 317 74.4
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 4.2e-135 485.0 293 79.2
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 4.2e-135 485.0 294 77.2
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 4.2e-135 485.0 294 77.9
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 5.5e-135 484.6 294 78.9
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 9.4e-135 483.8 293 78.5
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 9.4e-135 483.8 294 77.6
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 9.4e-135 483.8 292 79.5
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 1.2e-134 483.4 293 79.2
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.6e-134 483.0 294 76.9
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 4.6e-134 481.5 293 78.2
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 7.9e-134 480.7 294 76.9
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 7.9e-134 480.7 293 78.2
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.0e-133 480.3 293 79.2
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 3.9e-133 478.4 293 77.8
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 5.1e-133 478.0 293 77.8
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 1.1e-132 476.9 292 77.1
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 1.5e-132 476.5 293 77.5
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 2.0e-132 476.1 317 71.9
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 2.0e-132 476.1 317 71.9
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 2.0e-132 476.1 293 76.5
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 4.3e-132 474.9 294 76.2
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 5.7e-132 474.6 291 78.7
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 1.7e-131 473.0 291 77.7
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 1.7e-131 473.0 293 76.5
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.2e-131 472.6 293 77.8
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 2.2e-131 472.6 293 77.1
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 6.3e-131 471.1 294 76.9
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 8.2e-131 470.7 294 76.2
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 8.2e-131 470.7 303 75.2
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 1.8e-130 469.5 293 75.8
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 6.9e-130 467.6 293 75.4
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 4.5e-129 464.9 294 74.8
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 4.5e-129 464.9 291 75.3
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 4.5e-129 464.9 293 74.7
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 4.5e-129 464.9 291 74.9
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 5.9e-129 464.5 293 76.8
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 1.7e-128 463.0 294 74.1
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 3.8e-128 461.8 293 75.4
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 5.0e-128 461.5 327 70.9
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 8.5e-128 460.7 293 74.4
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 2.5e-127 459.1 293 74.7
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 7.2e-127 457.6 294 75.5
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 2.1e-126 456.1 290 75.2
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 2.1e-126 456.1 293 74.7
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 3.6e-126 455.3 293 74.1
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 6.1e-126 454.5 297 74.4
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 7.9e-126 454.1 292 74.0
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 7.9e-126 454.1 291 73.5
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 1.8e-125 453.0 294 73.1
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 3.0e-125 452.2 293 73.4
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 3.9e-125 451.8 293 73.4
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 3.9e-125 451.8 293 72.7
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 6.7e-125 451.1 291 73.5
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 8.8e-125 450.7 293 73.0
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.6e-124 449.1 270 78.1
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 7.4e-124 447.6 290 75.2
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 9.7e-124 447.2 293 72.4
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 1.3e-123 446.8 292 71.2
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 3.7e-123 445.3 292 71.6
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 1.1e-122 443.7 293 72.7
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 1.4e-122 443.4 295 71.9
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 2.4e-122 442.6 292 73.6
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 3.1e-122 442.2 295 72.2
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 5.3e-122 441.4 289 74.7
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 1.2e-121 440.3 288 71.9
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 2.0e-121 439.5 292 71.6
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 1.0e-120 437.2 293 72.4
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 1.7e-120 436.4 293 71.7
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 3.6e-118 428.7 282 72.7
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 5.2e-117 424.9 289 71.6
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 6.7e-117 424.5 289 71.3
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 2.6e-116 422.5 270 76.3
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 1.7e-115 419.9 272 75.0
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 9.1e-114 414.1 289 68.2
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 1.6e-113 413.3 272 73.9
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 1.6e-113 413.3 360 58.3
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 7.7e-113 411.0 326 65.0
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 1.7e-112 409.8 250 76.4
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 1.1e-111 407.1 243 78.6
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 1.5e-111 406.8 292 68.2
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 3.6e-110 402.1 245 76.7
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 4.7e-110 401.7 293 67.2
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 6.1e-110 401.4 293 67.2
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 3.0e-109 399.1 242 78.5
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 4.4e-108 395.2 272 70.6
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 7.5e-108 394.4 273 72.2
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 9.7e-108 394.0 243 75.3
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.4e-106 390.2 325 61.5
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 3.5e-105 385.6 269 69.9
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 9.4e-103 377.5 293 64.8
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 2.1e-102 376.3 293 64.5
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 2.3e-101 372.9 293 64.5
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 4.4e-100 368.6 272 68.8
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 5.7e-100 368.2 245 73.1
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 1.1e-95 354.0 271 66.1
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 4.2e-95 352.1 301 59.8
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 2.8e-91 339.3 275 66.5
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 7.3e-87 324.7 202 74.3
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 1.2e-84 317.4 247 59.9
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 3.7e-83 312.4 259 57.5
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 1.1e-74 284.3 153 83.7
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 3.5e-73 279.3 299 49.2
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 2.1e-70 270.0 153 81.0
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 1.7e-67 260.4 245 52.2
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 2.9e-59 233.0 152 74.3
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.4e-53 214.2 132 74.2
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 4.8e-38 162.5 141 53.9
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.5e-36 157.5 205 45.9
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 5.3e-29 132.5 245 33.5
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 1.3e-27 127.9 86 70.9
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 1.0e-24 118.2 63 81.0
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 3.3e-15 86.7 135 36.3
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 1.3e-14 84.7 234 25.6
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.3e-11 74.7 69 59.4


User provided reference genes

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