Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p12530 Brassica napus HOM05D000106 ORTHO05D033330 7.5e-59 230.3 118 100.0
C09p14860 Brassica napus HOM05D000106 ORTHO05D033330 2.1e-29 132.5 81 87.7
BcaB07g30725 Brassica carinata HOM05D000106 ORTHO05D000160 1.9e-22 109.4 73 78.1
Thhalv10011230m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 5.8e-11 71.2 68 54.4
AT1G51840 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 7.6e-11 70.9 66 56.1
AL1G59870 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 1.3e-10 70.1 66 54.5
BcaC08g43349 Brassica carinata HOM05D000106 ORTHO05D000160 1.3e-10 70.1 68 54.4
C06p07110 Brassica napus HOM05D000106 ORTHO05D000160 1.3e-10 70.1 68 54.4
BolC6t35801H Brassica oleracea HOM05D000106 ORTHO05D000160 1.3e-10 70.1 68 54.4
BraA06t23432Z Brassica rapa HOM05D000106 ORTHO05D000160 1.3e-10 70.1 68 54.4
CARHR041970 Cardamine hirsuta HOM05D000106 ORTHO05D000160 1.3e-10 70.1 66 53.0
Carub.0001s4074 Capsella rubella HOM05D000106 ORTHO05D000160 1.7e-10 69.7 73 50.7
Sp1g38480 Schrenkiella parvula HOM05D000106 ORTHO05D000160 2.9e-10 68.9 66 53.0
Aa31LG10G2970 Aethionema arabicum HOM05D000106 ORTHO05D000160 3.8e-10 68.6 64 53.1
A05p19310 Brassica napus HOM05D000106 ORTHO05D000160 3.8e-10 68.6 70 51.4
A06p02210 Brassica napus HOM05D000106 ORTHO05D000160 3.8e-10 68.6 68 52.9
Aa31sc23G270 Aethionema arabicum HOM05D000106 ORTHO05D000160 4.9e-10 68.2 63 50.8
BraA05t20835Z Brassica rapa HOM05D000106 ORTHO05D000160 1.1e-09 67.0 68 50.0
Thhalv10020016m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 2.4e-09 65.9 59 55.9
Thhalv10011228m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 4.2e-09 65.1 63 54.0
Carub.0001s4075 Capsella rubella HOM05D000106 ORTHO05D000160 5.5e-09 64.7 67 49.3
C06p13410 Brassica napus HOM05D000106 ORTHO05D000160 9.3e-09 63.9 68 48.5
BolC6t36500H Brassica oleracea HOM05D000106 ORTHO05D000160 9.3e-09 63.9 68 48.5
Thhalv10011227m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 9.3e-09 63.9 66 48.5
BcaB02g11042 Brassica carinata HOM05D000106 ORTHO05D000160 1.2e-08 63.5 68 48.5
CARHR102140 Cardamine hirsuta HOM05D000106 ORTHO05D000160 1.2e-08 63.5 65 52.3
AL1G59850 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 1.6e-08 63.2 61 49.2
CARHR041980 Cardamine hirsuta HOM05D000106 ORTHO05D000160 1.6e-08 63.2 61 50.8
AT1G51810 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 2.1e-08 62.8 64 46.9
AT1G51805 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 2.7e-08 62.4 61 49.2
AT1G51820 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 2.7e-08 62.4 75 44.0
CARHR258870 Cardamine hirsuta HOM05D000106 ORTHO05D000160 2.7e-08 62.4 64 46.9
AT1G51850 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 3.5e-08 62.0 66 47.0
BcaB05g22530 Brassica carinata HOM05D000106 ORTHO05D000160 3.5e-08 62.0 58 53.4
BolC9t54386H Brassica oleracea HOM05D000106 ORTHO05D033330 3.5e-08 62.0 38 84.2
THA.LOC104810550 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 3.5e-08 62.0 61 50.8
Aa31LG3G1140 Aethionema arabicum HOM05D000106 ORTHO05D000160 6.0e-08 61.2 61 50.8
BcaB04g19164 Brassica carinata HOM05D000106 ORTHO05D000160 6.0e-08 61.2 58 55.2
BcaC01g03507 Brassica carinata HOM05D000106 ORTHO05D000160 6.0e-08 61.2 58 55.2
A03p42210 Brassica napus HOM05D000106 ORTHO05D000160 6.0e-08 61.2 58 55.2
C03p51660 Brassica napus HOM05D000106 ORTHO05D000160 6.0e-08 61.2 58 55.2
C08p14010 Brassica napus HOM05D000106 ORTHO05D000160 6.0e-08 61.2 65 50.8
BolC3t17451H Brassica oleracea HOM05D000106 ORTHO05D000160 6.0e-08 61.2 58 55.2
BolC8t49034H Brassica oleracea HOM05D000106 ORTHO05D000160 6.0e-08 61.2 65 50.8
BraA03t13374Z Brassica rapa HOM05D000106 ORTHO05D000160 6.0e-08 61.2 58 55.2
BcaC03g18522 Brassica carinata HOM05D000106 ORTHO05D000160 7.9e-08 60.8 61 50.8
C02p08640 Brassica napus HOM05D000106 ORTHO05D006801 7.9e-08 60.8 61 50.8
BolC2t06780H Brassica oleracea HOM05D000623 ORTHO05D006801 7.9e-08 60.8 61 50.8
Carub.0004s0999 Capsella rubella HOM05D000106 ORTHO05D000160 1.0e-07 60.5 54 53.7
BcaB01g04561 Brassica carinata HOM05D000106 ORTHO05D000160 1.3e-07 60.1 71 45.1
BraA02t05776Z Brassica rapa HOM05D000106 ORTHO05D000160 1.3e-07 60.1 59 52.5
Carub.0003s2137 Capsella rubella HOM05D000106 ORTHO05D000160 1.3e-07 60.1 58 53.4
AL8G36160 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 1.8e-07 59.7 58 53.4
AT2G04300 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 1.8e-07 59.7 56 53.6
AT3G21340 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 1.8e-07 59.7 58 53.4
BcaB05g22528 Brassica carinata HOM05D000106 ORTHO05D000160 2.3e-07 59.3 58 53.4
Aa31LG10G2990 Aethionema arabicum HOM05D000106 ORTHO05D000160 3.0e-07 58.9 66 47.0
BcaC03g13993 Brassica carinata HOM05D000106 ORTHO05D000160 3.9e-07 58.5 58 53.4
C02p12310 Brassica napus HOM05D000106 ORTHO05D000160 3.9e-07 58.5 58 53.4
BolC2t07331H Brassica oleracea HOM05D000106 ORTHO05D000160 3.9e-07 58.5 58 53.4
CARHR097260 Cardamine hirsuta HOM05D000106 ORTHO05D000160 5.1e-07 58.2 58 51.7
FvH4_6g32740 Fragaria vesca HOM05D000106 ORTHO05D000160 5.1e-07 58.2 54 55.6
Sp1g38470 Schrenkiella parvula HOM05D000106 ORTHO05D000160 5.1e-07 58.2 73 41.1
Sp3g19400 Schrenkiella parvula HOM05D000106 ORTHO05D000160 5.1e-07 58.2 68 48.5
THA.LOC104810551 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 5.1e-07 58.2 68 47.1
THA.LOC104817946 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 5.1e-07 58.2 61 49.2
Thhalv10005586m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 6.7e-07 57.8 55 56.4
Thhalv10011226m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 6.7e-07 57.8 68 44.1
C09p52050 Brassica napus HOM05D000106 ORTHO05D000160 8.7e-07 57.4 69 43.5
CARHR122210 Cardamine hirsuta HOM05D000106 ORTHO05D000160 8.7e-07 57.4 62 51.6
AT5G16900 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 1.1e-06 57.0 61 47.5
Carub.0004s0998 Capsella rubella HOM05D000106 ORTHO05D000160 1.1e-06 57.0 64 46.9
Duzib235G0765 Durio zibethinus HOM05D000106 ORTHO05D000160 1.1e-06 57.0 65 44.6
Sed0003456 Sechium edule HOM05D000106 ORTHO05D000160 1.1e-06 57.0 97 36.1
Aa31LG4G15470 Aethionema arabicum HOM05D000106 ORTHO05D000160 1.5e-06 56.6 68 48.5
AL5G25240 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 1.5e-06 56.6 69 44.9
CARHR007350 Cardamine hirsuta HOM05D000106 ORTHO05D000160 1.5e-06 56.6 58 51.7
Thhalv10011309m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 1.5e-06 56.6 67 41.8
AL7G33420 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 1.9e-06 56.2 64 46.9
C03p13410 Brassica napus HOM05D000106 ORTHO05D000160 1.9e-06 56.2 71 40.8
BolC9t58067H Brassica oleracea HOM05D000106 ORTHO05D000160 1.9e-06 56.2 60 46.7
AL1G59880 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 2.5e-06 55.8 68 42.6
BcaC08g43944 Brassica carinata HOM05D000106 ORTHO05D000160 2.5e-06 55.8 68 42.6
C06p13420 Brassica napus HOM05D000106 ORTHO05D000160 2.5e-06 55.8 68 42.6
CARHR122240 Cardamine hirsuta HOM05D000106 ORTHO05D000160 2.5e-06 55.8 53 54.7
CARHR154810 Cardamine hirsuta HOM05D000106 ORTHO05D000160 2.5e-06 55.8 66 48.5
Sp1g38490 Schrenkiella parvula HOM05D000106 ORTHO05D000160 2.5e-06 55.8 69 46.4
CARHR109680 Cardamine hirsuta HOM05D000106 ORTHO05D000160 3.3e-06 55.5 54 50.0
CARHR273130 Cardamine hirsuta HOM05D000106 ORTHO05D000160 3.3e-06 55.5 58 48.3
CARHR273230 Cardamine hirsuta HOM05D000106 ORTHO05D000160 3.3e-06 55.5 64 42.2
COL.COLO4_30558 Corchorus olitorius HOM05D000106 ORTHO05D000160 3.3e-06 55.5 54 51.9
Thhalv10016220m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 3.3e-06 55.5 63 42.9
THA.LOC104815786 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 3.3e-06 55.5 58 51.7
AL8G36200 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 4.3e-06 55.1 58 48.3
A09p06570 Brassica napus HOM05D000106 ORTHO05D000160 4.3e-06 55.1 51 56.9
A10p16900 Brassica napus HOM05D000106 ORTHO05D000160 4.3e-06 55.1 68 45.6
BolC3t20579H Brassica oleracea HOM05D000106 ORTHO05D000160 4.3e-06 55.1 64 46.9
BolC9t58078H Brassica oleracea HOM05D000106 ORTHO05D000160 4.3e-06 55.1 68 45.6
BraA05t20832Z Brassica rapa HOM05D000106 ORTHO05D000160 4.3e-06 55.1 90 40.0
BraA09t36301Z Brassica rapa HOM05D000106 ORTHO05D000160 4.3e-06 55.1 51 56.9
BraA10t43771Z Brassica rapa HOM05D000106 ORTHO05D000160 4.3e-06 55.1 68 45.6
CARHR122160 Cardamine hirsuta HOM05D000106 ORTHO05D000160 4.3e-06 55.1 68 45.6
Thhalv10017811m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 4.3e-06 55.1 58 46.6
Aa31LG4G15410 Aethionema arabicum HOM05D000106 ORTHO05D000160 5.6e-06 54.7 63 47.6
AT1G51860 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 5.6e-06 54.7 68 41.2
BcaB01g03993 Brassica carinata HOM05D000106 ORTHO05D000160 5.6e-06 54.7 68 44.1
BcaB06g28338 Brassica carinata HOM05D000106 ORTHO05D000160 5.6e-06 54.7 56 51.8
BcaC03g13994 Brassica carinata HOM05D000106 ORTHO05D000160 5.6e-06 54.7 78 41.0
BolC2t07332H Brassica oleracea HOM05D000106 ORTHO05D000160 5.6e-06 54.7 78 41.0
BolC3t13799H Brassica oleracea HOM05D000106 ORTHO05D000160 5.6e-06 54.7 62 45.2
QL05p017834 Quercus lobata HOM05D000106 ORTHO05D000160 5.6e-06 54.7 54 55.6
Sp3g32600 Schrenkiella parvula HOM05D000106 ORTHO05D000160 5.6e-06 54.7 55 49.1
AT3G46330 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 7.4e-06 54.3 61 49.2
AT4G20450 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 7.4e-06 54.3 62 48.4
BcaB08g36230 Brassica carinata HOM05D000106 ORTHO05D000160 7.4e-06 54.3 58 48.3
BcaC03g13995 Brassica carinata HOM05D000106 ORTHO05D000160 7.4e-06 54.3 63 46.0
BcaC04g19747 Brassica carinata HOM05D000106 ORTHO05D000160 7.4e-06 54.3 57 47.4
C02p12340 Brassica napus HOM05D000106 ORTHO05D000160 7.4e-06 54.3 63 46.0
BolC2t07329H Brassica oleracea HOM05D000106 ORTHO05D000160 7.4e-06 54.3 66 39.4
BolC2t07334H Brassica oleracea HOM05D000106 ORTHO05D000160 7.4e-06 54.3 63 46.0
VMungo1080G0864 Vigna mungo HOM05D000106 ORTHO05D000160 7.4e-06 54.3 49 53.1
Aa31LG10G3020 Aethionema arabicum HOM05D000106 ORTHO05D000160 9.6e-06 53.9 78 38.5
BcaC06g36538 Brassica carinata HOM05D000106 ORTHO05D000160 9.6e-06 53.9 70 38.6
A05p19300 Brassica napus HOM05D000106 ORTHO05D000160 9.6e-06 53.9 90 38.9
Carub.0004s1000 Capsella rubella HOM05D000106 ORTHO05D000160 9.6e-06 53.9 53 56.6
Sp6g21340 Schrenkiella parvula HOM05D000106 ORTHO05D000160 9.6e-06 53.9 59 49.2
THA.LOC104800666 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 9.6e-06 53.9 71 39.4
THA.LOC104817943 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 9.6e-06 53.9 65 41.5


User provided reference genes

Program Settings