Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p12260 Brassica napus HOM05D002255 ORTHO05D002288 5.4e-81 304.3 155 100.0
C09p14490 Brassica napus HOM05D002255 ORTHO05D002288 5.4e-81 304.3 155 100.0
BraA09t36869Z Brassica rapa HOM05D002255 ORTHO05D002288 5.4e-81 304.3 155 100.0
BcaC04g22865 Brassica carinata HOM05D002255 ORTHO05D002288 1.2e-75 286.6 155 94.2
BolC9t54351H Brassica oleracea HOM05D002255 ORTHO05D002288 1.2e-75 286.6 155 94.2
BcaB07g31618 Brassica carinata HOM05D002255 ORTHO05D002288 3.6e-69 265.0 163 87.7
AL2G10060 Arabidopsis lyrata HOM05D002255 ORTHO05D002288 1.2e-48 196.8 192 59.9
Thhalv10023888m.g Eutrema salsugineum HOM05D002255 ORTHO05D002288 1.2e-48 196.8 208 58.7
Sp2g00030 Schrenkiella parvula HOM05D002255 ORTHO05D002288 6.0e-48 194.5 207 58.5
AT1G64700 Arabidopsis thaliana HOM05D002255 ORTHO05D002288 5.6e-46 188.0 204 57.4
CARHR046200 Cardamine hirsuta HOM05D002255 ORTHO05D002288 1.5e-43 179.9 210 54.8
Carub.0002s0003 Capsella rubella HOM05D002255 ORTHO05D002288 7.1e-41 171.0 181 57.5
Aa31LG2G1750 Aethionema arabicum HOM05D002255 ORTHO05D002288 5.6e-30 134.8 195 46.7
THA.LOC104809298 Tarenaya hassleriana HOM05D002255 ORTHO05D002288 3.2e-25 119.0 197 39.6
CSS0018027 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 4.3e-22 108.6 197 39.1
Ciclev10024010m.g Citrus clementina HOM05D002255 ORTHO05D002288 7.4e-22 107.8 187 40.6
QL02p027560 Quercus lobata HOM05D002255 ORTHO05D002288 1.6e-21 106.7 189 38.6
Thecc.03G218700 Theobroma cacao HOM05D002255 ORTHO05D002288 1.1e-20 104.0 194 39.7
Eucgr.E01061 Eucalyptus grandis HOM05D002255 ORTHO05D002288 3.1e-20 102.4 195 36.4
Duzib205G0269 Durio zibethinus HOM05D002255 ORTHO05D002288 4.0e-20 102.1 194 39.7
Potri.011G153000 Populus trichocarpa HOM05D002255 ORTHO05D002288 6.9e-20 101.3 191 41.4
Potri.001G448500 Populus trichocarpa HOM05D002255 ORTHO05D002288 9.0e-20 100.9 191 40.3
Eucgr.E01054 Eucalyptus grandis HOM05D002255 ORTHO05D002288 1.2e-19 100.5 192 38.0
COL.COLO4_10817 Corchorus olitorius HOM05D002255 ORTHO05D002288 2.0e-19 99.8 200 37.0
Gohir.D09G182900 Gossypium hirsutum HOM05D002255 ORTHO05D002288 4.5e-19 98.6 195 37.4
Gorai.006G205200 Gossypium raimondii HOM05D002255 ORTHO05D002288 4.5e-19 98.6 195 37.4
CiPaw.12G076300 Carya illinoinensis HOM05D002255 ORTHO05D002288 1.0e-18 97.4 199 37.7
Gohir.A08G109600 Gossypium hirsutum HOM05D002255 ORTHO05D002288 1.3e-18 97.1 195 37.9
Cpa.g.sc37.90 Carica papaya HOM05D002255 ORTHO05D002288 1.7e-18 96.7 201 37.3
Hma1.2p1_0456F.1_g156800 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 2.2e-18 96.3 207 35.7
Lsat_1_v5_gn_0_45861 Lactuca sativa HOM05D002255 ORTHO05D002288 2.2e-18 96.3 187 38.5
Lsat_1_v5_gn_3_14761 Lactuca sativa HOM05D002255 ORTHO05D002288 2.2e-18 96.3 187 38.5
RcHm_v2.0_Chr7g0187471 Rosa chinensis HOM05D002255 ORTHO05D002288 2.2e-18 96.3 191 40.3
CiPaw.11G110900 Carya illinoinensis HOM05D002255 ORTHO05D002288 2.9e-18 95.9 192 37.5
Gohir.D08G122400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 3.8e-18 95.5 195 37.4
Gorai.004G129100 Gossypium raimondii HOM05D002255 ORTHO05D002288 3.8e-18 95.5 195 37.4
GSVIVG01027432001 Vitis vinifera HOM05D002255 ORTHO05D002288 3.8e-18 95.5 145 41.4
CANSAT21G2105 Cannabis sativa HOM05D002255 ORTHO05D002288 6.5e-18 94.7 183 39.9
Prupe.5G132000 Prunus persica HOM05D002255 ORTHO05D002288 6.5e-18 94.7 186 37.6
Sabra11G0146400 Salix brachista HOM05D002255 ORTHO05D002288 8.4e-18 94.4 191 39.3
FvH4_5g10680 Fragaria vesca HOM05D002255 ORTHO05D002288 1.4e-17 93.6 188 38.8
FAN08G3252 Fragaria x ananassa HOM05D002255 ORTHO05D002288 1.4e-17 93.6 187 39.0
FAN18G0336 Fragaria x ananassa HOM05D002255 ORTHO05D002288 1.4e-17 93.6 188 38.8
FAN13G0081 Fragaria x ananassa HOM05D002255 ORTHO05D002288 1.9e-17 93.2 188 38.8
MD14G1138100 Malus domestica HOM05D002255 ORTHO05D002288 1.9e-17 93.2 185 37.3
FAN04G0254 Fragaria x ananassa HOM05D002255 ORTHO05D002288 2.5e-17 92.8 187 39.0
MD06G1121500 Malus domestica HOM05D002255 ORTHO05D002288 9.3e-17 90.9 185 35.7
Lj2g0024076 Lotus japonicus HOM05D002255 ORTHO05D002288 2.1e-16 89.7 201 34.8
Cfa011907 Carpinus fangiana HOM05D002255 ORTHO05D002288 3.5e-16 89.0 131 45.0
Haze_09192 Corylus avellana HOM05D002255 ORTHO05D002288 3.5e-16 89.0 103 53.4
Gohir.A09G188100 Gossypium hirsutum HOM05D002255 ORTHO05D002288 3.5e-16 89.0 195 35.4
PGR042G3556 Punica granatum HOM05D002255 ORTHO05D002288 4.6e-16 88.6 194 37.1
Lj8P199T12 Lonicera japonica HOM05D002255 ORTHO05D002288 1.0e-15 87.4 102 50.0
Nitab4.5_0000479g0060 Nicotiana tabacum HOM05D002255 ORTHO05D002288 1.3e-15 87.0 200 34.0
AUR62019937 Chenopodium quinoa HOM05D002255 ORTHO05D002288 3.0e-15 85.9 193 36.3
TAR375G0553 Trochodendron aralioides HOM05D002255 ORTHO05D002288 3.9e-15 85.5 189 36.0
HanXRQChr17g0534111 Helianthus annuus HOM05D002255 ORTHO05D002288 6.7e-15 84.7 178 37.6
TAR374G1498 Trochodendron aralioides HOM05D002255 ORTHO05D002288 6.7e-15 84.7 190 34.7
Nitab4.5_0003419g0080 Nicotiana tabacum HOM05D002255 ORTHO05D002288 1.1e-14 84.0 202 34.2
Oeu010729.1 Olea europaea HOM05D002255 ORTHO05D002288 1.1e-14 84.0 190 36.8
TWI14G0548 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 1.1e-14 84.0 183 35.5
Duzib138G1476 Durio zibethinus HOM05D002255 ORTHO05D002288 1.5e-14 83.6 193 33.7
Nn1g00427 Nelumbo nucifera HOM05D002255 ORTHO05D002288 1.5e-14 83.6 189 35.4
Rhsim02G0253400 Rhododendron simsii HOM05D002255 ORTHO05D002288 1.5e-14 83.6 102 51.0
Sc01g0010790 Simmondsia chinensis HOM05D002255 ORTHO05D002288 1.5e-14 83.6 197 35.5
Atru.chr5.759 Acer truncatum HOM05D002255 ORTHO05D002288 3.3e-14 82.4 189 33.3
Peaxi162Scf00074g10019 Petunia axillaris HOM05D002255 ORTHO05D002288 5.7e-14 81.6 197 34.5
Thecc.01G334100 Theobroma cacao HOM05D002255 ORTHO05D002288 5.7e-14 81.6 199 32.2
Gohir.A11G100600 Gossypium hirsutum HOM05D002255 ORTHO05D002288 7.4e-14 81.3 197 32.5
Gorai.007G112600 Gossypium raimondii HOM05D002255 ORTHO05D002288 7.4e-14 81.3 197 32.5
Sabra02G0134900 Salix brachista HOM05D002255 ORTHO05D002288 7.4e-14 81.3 149 40.9
Atru.chr9.1857 Acer truncatum HOM05D002255 ORTHO05D002288 9.7e-14 80.9 203 35.0
ECA246G2759 Erigeron canadensis HOM05D002255 ORTHO05D002288 9.7e-14 80.9 108 51.9
Ah.12g053310 Amaranthus hybridus HOM05D002255 ORTHO05D002288 1.3e-13 80.5 190 37.4
ClCG07G008260 Citrullus lanatus HOM05D002255 ORTHO05D002288 1.6e-13 80.1 195 34.9
Gohir.D11G105300 Gossypium hirsutum HOM05D002255 ORTHO05D002288 1.6e-13 80.1 197 32.0
Lalb_Chr19g0130591 Lupinus albus HOM05D002255 ORTHO05D002288 1.6e-13 80.1 190 35.3
TWI15G0718 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 2.2e-13 79.7 105 48.6
Manes.12G116600 Manihot esculenta HOM05D002255 ORTHO05D002288 6.3e-13 78.2 102 48.0
MELO3C016367.2 Cucumis melo HOM05D002255 ORTHO05D002288 8.2e-13 77.8 195 34.4
QL08p047076 Quercus lobata HOM05D002255 ORTHO05D002288 8.2e-13 77.8 197 32.0
Ca_10715_v3 Cicer arietinum L. HOM05D002255 ORTHO05D002288 1.1e-12 77.4 191 34.6
Cc00_g16410 Coffea canephora HOM05D002255 ORTHO05D002288 1.8e-12 76.6 209 34.0
Cpa.g.sc141.2 Carica papaya HOM05D002255 ORTHO05D002288 2.4e-12 76.3 173 34.1
Manes.01G240600 Manihot esculenta HOM05D002255 ORTHO05D002288 2.4e-12 76.3 189 33.3
VMungo0464G0722 Vigna mungo HOM05D002255 ORTHO05D002288 2.4e-12 76.3 200 32.5
Sed0000936 Sechium edule HOM05D002255 ORTHO05D002288 3.1e-12 75.9 188 35.1
CsaV3_4G005840 Cucumis sativus L. HOM05D002255 ORTHO05D002288 4.1e-12 75.5 168 38.1
Phvul.004G106400 Phaseolus vulgaris HOM05D002255 ORTHO05D002288 4.1e-12 75.5 195 33.3
Potri.002G178900 Populus trichocarpa HOM05D002255 ORTHO05D002288 4.1e-12 75.5 194 33.5
AUR62007073 Chenopodium quinoa HOM05D002255 ORTHO05D002288 5.3e-12 75.1 221 32.6
Psat3g171000 Pisum sativum HOM05D002255 ORTHO05D002288 6.9e-12 74.7 197 31.5
Nn3g18858 Nelumbo nucifera HOM05D002255 ORTHO05D002288 9.0e-12 74.3 125 44.0
Medtr6g052290 Medicago truncatula HOM05D002255 ORTHO05D002288 1.2e-11 73.9 154 39.0
Peaxi162Scf00313g00031 Petunia axillaris HOM05D002255 ORTHO05D002288 1.5e-11 73.6 206 29.1
Potri.014G104900 Populus trichocarpa HOM05D002255 ORTHO05D002288 1.5e-11 73.6 197 35.5
Cfa003741 Carpinus fangiana HOM05D002255 ORTHO05D002288 2.0e-11 73.2 199 32.7
Prupe.2G196900 Prunus persica HOM05D002255 ORTHO05D002288 2.0e-11 73.2 179 33.5
MBI12_g16192_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 2.6e-11 72.8 177 33.3
GSVIVG01019671001 Vitis vinifera HOM05D002255 ORTHO05D002288 2.6e-11 72.8 146 38.4
CSS0032293 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 3.4e-11 72.4 86 52.3
Haze_15727 Corylus avellana HOM05D002255 ORTHO05D002288 3.4e-11 72.4 201 31.3
Sabra14G0077300 Salix brachista HOM05D002255 ORTHO05D002288 3.4e-11 72.4 194 33.0
Nitab4.5_0004249g0030 Nicotiana tabacum HOM05D002255 ORTHO05D002288 4.5e-11 72.0 202 30.7
CiPaw.01G082000 Carya illinoinensis HOM05D002255 ORTHO05D002288 7.7e-11 71.2 177 33.9
Sed0017440 Sechium edule HOM05D002255 ORTHO05D002288 7.7e-11 71.2 181 34.8
Medtr1g099630 Medicago truncatula HOM05D002255 ORTHO05D002288 1.0e-10 70.9 192 30.7
DCAR_006563 Daucus carota HOM05D002255 ORTHO05D002288 1.3e-10 70.5 208 34.6
MBI04_g15572_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 1.3e-10 70.5 180 31.7
CDE12G0944 Ceratophyllum demersum HOM05D002255 ORTHO05D002288 1.7e-10 70.1 170 31.8
TPR.G9174 Trifolium pratense HOM05D002255 ORTHO05D002288 1.7e-10 70.1 137 40.1
Psat6g195880 Pisum sativum HOM05D002255 ORTHO05D002288 2.2e-10 69.7 127 39.4
Hma1.2p1_1697F.1_g298070 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 3.8e-10 68.9 197 30.5
Hma1.2p1_2008F.1_g310960 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 3.8e-10 68.9 197 30.5
Nitab4.5_0002053g0080 Nicotiana tabacum HOM05D002255 ORTHO05D002288 5.0e-10 68.6 207 30.0
Lj3g0024476 Lotus japonicus HOM05D002255 ORTHO05D002288 6.5e-10 68.2 180 32.2
Phvul.010G119100 Phaseolus vulgaris HOM05D002255 ORTHO05D002288 6.5e-10 68.2 175 34.9
PGSC0003DMG400011267 Solanum tuberosum HOM05D002255 ORTHO05D002288 6.5e-10 68.2 110 43.6
MD07G1158800 Malus domestica HOM05D002255 ORTHO05D002288 8.5e-10 67.8 162 36.4
TPR.G19840 Trifolium pratense HOM05D002255 ORTHO05D002288 8.5e-10 67.8 181 31.5
arahy.Tifrunner.gnm1.ann1.I8323W Arachis hypogaea HOM05D002255 ORTHO05D002288 1.4e-09 67.0 190 31.6
Phvul.007G075200 Phaseolus vulgaris HOM05D002255 ORTHO05D002288 1.4e-09 67.0 116 44.0
arahy.Tifrunner.gnm1.ann1.WLQ804 Arachis hypogaea HOM05D002255 ORTHO05D002288 1.9e-09 66.6 184 32.6
Duzib133G0281 Durio zibethinus HOM05D002255 ORTHO05D002288 1.9e-09 66.6 134 38.1
Glyma.07G050100 Glycine max HOM05D002255 ORTHO05D002288 1.9e-09 66.6 179 34.6
Oeu064420.1 Olea europaea HOM05D002255 ORTHO05D002288 1.9e-09 66.6 176 34.1
TPR.G7743 Trifolium pratense HOM05D002255 ORTHO05D002288 1.9e-09 66.6 112 40.2
VMungo0720G2656 Vigna mungo HOM05D002255 ORTHO05D002288 1.9e-09 66.6 122 41.8
PGSC0003DMG400012229 Solanum tuberosum HOM05D002255 ORTHO05D002288 2.5e-09 66.2 182 32.4
VMungo0331G1755 Vigna mungo HOM05D002255 ORTHO05D002288 2.5e-09 66.2 175 34.9
MD01G1088400 Malus domestica HOM05D002255 ORTHO05D002288 3.2e-09 65.9 162 35.2
Migut.N02126 Erythranthe guttata HOM05D002255 ORTHO05D002288 5.5e-09 65.1 184 34.8
Ciclev10022281m.g Citrus clementina HOM05D002255 ORTHO05D002288 7.2e-09 64.7 193 30.1
COL.COLO4_06208 Corchorus olitorius HOM05D002255 ORTHO05D002288 7.2e-09 64.7 93 46.2
Lalb_Chr10g0100851 Lupinus albus HOM05D002255 ORTHO05D002288 7.2e-09 64.7 189 30.7
Glyma.03G260700 Glycine max HOM05D002255 ORTHO05D002288 9.4e-09 64.3 189 28.6
Oeu022736.1 Olea europaea HOM05D002255 ORTHO05D002288 9.4e-09 64.3 171 31.6
Glyma.16G018800 Glycine max HOM05D002255 ORTHO05D002288 1.2e-08 63.9 180 34.4
Psat4g163560 Pisum sativum HOM05D002255 ORTHO05D002288 1.2e-08 63.9 178 32.6
Medtr8g017100 Medicago truncatula HOM05D002255 ORTHO05D002288 1.6e-08 63.5 184 30.4
Ca_26734_v3 Cicer arietinum L. HOM05D002255 ORTHO05D002288 2.1e-08 63.2 89 48.3
SEGI_25160 Sequoiadendron giganteum HOM05D002255 ORTHO05D002288 2.1e-08 63.2 169 31.4
SalBow5G5501 Salvia bowleyana HOM05D002255 ORTHO05D002288 2.7e-08 62.8 152 36.2
Manes.05G017000 Manihot esculenta HOM05D002255 ORTHO05D002288 3.6e-08 62.4 179 31.8
unitig_748.g7136 Utricularia gibba HOM05D002255 ORTHO05D002288 6.1e-08 61.6 182 31.3
Gohir.A08G034900 Gossypium hirsutum HOM05D002255 ORTHO05D002288 7.9e-08 61.2 180 30.6
Lj5g0015365 Lotus japonicus HOM05D002255 ORTHO05D002288 7.9e-08 61.2 124 39.5
CsaV3_3G007320 Cucumis sativus L. HOM05D002255 ORTHO05D002288 1.0e-07 60.8 166 32.5
Glyma.19G259600 Glycine max HOM05D002255 ORTHO05D002288 1.0e-07 60.8 179 31.8
VMungo1309G2654 Vigna mungo HOM05D002255 ORTHO05D002288 1.0e-07 60.8 196 28.1
Cc08_g16910 Coffea canephora HOM05D002255 ORTHO05D002288 1.4e-07 60.5 156 37.2
Glyma.16G177600 Glycine max HOM05D002255 ORTHO05D002288 1.4e-07 60.5 104 43.3
Gohir.D08G045400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 1.4e-07 60.5 184 31.0
Gorai.004G044300 Gossypium raimondii HOM05D002255 ORTHO05D002288 1.4e-07 60.5 184 31.0
PSO063G2959 Papaver somniferum HOM05D002255 ORTHO05D002288 1.4e-07 60.5 182 29.7
MELO3C005951.2 Cucumis melo HOM05D002255 ORTHO05D002288 1.8e-07 60.1 166 31.3
Solyc10g005020.3 Solanum lycopersicum HOM05D002255 ORTHO05D002288 2.3e-07 59.7 85 45.9
CDE04G1535 Ceratophyllum demersum HOM05D002255 ORTHO05D002288 3.0e-07 59.3 173 26.6
FAN06G4558 Fragaria x ananassa HOM05D002255 ORTHO05D002288 3.0e-07 59.3 151 33.8
Glyma.09G129800 Glycine max HOM05D002255 ORTHO05D002288 3.9e-07 58.9 106 40.6
Glyma.10G230400 Glycine max HOM05D002255 ORTHO05D002288 3.9e-07 58.9 102 45.1
PSO170G1572 Papaver somniferum HOM05D002255 ORTHO05D002288 5.1e-07 58.5 186 31.2
Sopen10g001030 Solanum pennellii HOM05D002255 ORTHO05D002288 5.1e-07 58.5 85 44.7
THA.LOC104802095 Tarenaya hassleriana HOM05D002255 ORTHO05D002288 5.1e-07 58.5 162 32.7
TPR.G7720 Trifolium pratense HOM05D002255 ORTHO05D002288 6.7e-07 58.2 48 60.4
AL5G44520 Arabidopsis lyrata HOM05D002255 ORTHO05D002288 8.8e-07 57.8 165 32.1
CARHR172280 Cardamine hirsuta HOM05D002255 ORTHO05D002288 2.0e-06 56.6 163 32.5
AUR62022671 Chenopodium quinoa HOM05D002255 ORTHO05D002288 2.0e-06 56.6 81 43.2
Cc02_g39930 Coffea canephora HOM05D002255 ORTHO05D002288 3.3e-06 55.8 80 47.5
SGA_v2.0_scaffold104G30247 Striga asiatica HOM05D002255 ORTHO05D002288 3.3e-06 55.8 169 30.2
MD08G1186200 Malus domestica HOM05D002255 ORTHO05D002288 4.3e-06 55.5 160 30.6
Ah.05g178990 Amaranthus hybridus HOM05D002255 ORTHO05D002288 5.7e-06 55.1 124 34.7
AT3G61920 Arabidopsis thaliana HOM05D002255 ORTHO05D002288 5.7e-06 55.1 161 29.2
CANSAT56G1904 Cannabis sativa HOM05D002255 ORTHO05D002288 5.7e-06 55.1 190 30.5
CANSAT56G3209 Cannabis sativa HOM05D002255 ORTHO05D002288 5.7e-06 55.1 190 30.5
Glyma.20G163000 Glycine max HOM05D002255 ORTHO05D002288 5.7e-06 55.1 118 39.0
FAN10G4169 Fragaria x ananassa HOM05D002255 ORTHO05D002288 7.4e-06 54.7 167 30.5
Carub.0005s2868 Capsella rubella HOM05D002255 ORTHO05D002288 9.7e-06 54.3 160 31.9
Thhalv10006365m.g Eutrema salsugineum HOM05D002255 ORTHO05D002288 9.7e-06 54.3 163 30.1
FAN03G3289 Fragaria x ananassa HOM05D002255 ORTHO05D002288 9.7e-06 54.3 167 33.5
FAN10G0899 Fragaria x ananassa HOM05D002255 ORTHO05D002288 9.7e-06 54.3 169 33.1
Lj1g0027887 Lotus japonicus HOM05D002255 ORTHO05D002288 9.7e-06 54.3 95 42.1
Sc23g0001820 Simmondsia chinensis HOM05D002255 ORTHO05D002288 9.7e-06 54.3 163 33.1


User provided reference genes

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