Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p10920 Brassica napus HOM05D005726 ORTHO05D001733 2.2e-70 268.9 138 100.0
BraA09t36732Z Brassica rapa HOM05D005726 ORTHO05D001733 2.2e-70 268.9 138 100.0
BcaC04g23031 Brassica carinata HOM05D005726 ORTHO05D001733 4.6e-68 261.2 138 95.7
C09p12890 Brassica napus HOM05D005726 ORTHO05D001733 4.6e-68 261.2 138 95.7
BolC9t54179H Brassica oleracea HOM05D005726 ORTHO05D001733 5.1e-67 257.7 138 94.9
BcaB07g31777 Brassica carinata HOM05D005726 ORTHO05D001733 1.8e-64 249.2 138 90.6
Sp2g14650 Schrenkiella parvula HOM05D005726 ORTHO05D001733 1.4e-61 239.6 138 85.5
AL8G19700 Arabidopsis lyrata HOM05D005726 ORTHO05D001733 1.0e-59 233.4 138 82.6
AT5G42146 Arabidopsis thaliana HOM05D005726 ORTHO05D001733 1.8e-59 232.6 138 82.6
AL8G19720 Arabidopsis lyrata HOM05D005726 ORTHO05D001733 3.9e-59 231.5 138 81.9
Carub.0008s0720 Capsella rubella HOM05D005726 ORTHO05D001733 2.4e-56 222.2 138 79.7
CARHR284740 Cardamine hirsuta HOM05D005726 ORTHO05D001733 6.1e-52 207.6 138 73.2
Thhalv10015257m.g Eutrema salsugineum HOM05D005726 ORTHO05D001733 2.8e-49 198.7 139 76.3
C02p51810 Brassica napus HOM05D005726 ORTHO05D001733 1.7e-46 189.5 119 84.0
A02p33660 Brassica napus HOM05D005726 ORTHO05D001733 8.5e-46 187.2 119 83.2
BcaC03g17246 Brassica carinata HOM05D005726 ORTHO05D001733 1.5e-45 186.4 119 82.4
BolC2t11266H Brassica oleracea HOM05D005726 ORTHO05D001733 1.5e-45 186.4 119 82.4
BraA02t08386Z Brassica rapa HOM05D005726 ORTHO05D001733 1.9e-45 186.0 119 82.4
THA.LOC104821582 Tarenaya hassleriana HOM05D005726 ORTHO05D001733 8.0e-44 180.6 138 62.3
Thecc.08G044700 Theobroma cacao HOM05D005726 ORTHO05D001733 4.1e-24 115.2 137 43.1
CiPaw.07G149600 Carya illinoinensis HOM05D005726 ORTHO05D001733 7.8e-23 110.9 137 44.5
Sed0021833 Sechium edule HOM05D005726 ORTHO05D001733 1.7e-22 109.8 143 40.6
Cfa013952 Carpinus fangiana HOM05D005726 ORTHO05D001733 8.6e-22 107.5 139 43.2
Gorai.010G004200 Gossypium raimondii HOM05D005726 ORTHO05D001733 8.6e-22 107.5 137 42.3
RcHm_v2.0_Chr6g0245271 Rosa chinensis HOM05D005726 ORTHO05D001733 1.5e-21 106.7 142 42.3
Gohir.D06G006900 Gossypium hirsutum HOM05D005726 ORTHO05D001733 1.9e-21 106.3 137 41.6
TAR625G1501 Trochodendron aralioides HOM05D005726 ORTHO05D001733 2.5e-21 105.9 137 41.6
Gohir.A06G004000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 3.3e-21 105.5 137 40.9
Atru.chr5.3224 Acer truncatum HOM05D005726 ORTHO05D001733 4.3e-21 105.1 134 42.5
Nn1g05896 Nelumbo nucifera HOM05D005726 ORTHO05D001733 4.3e-21 105.1 137 39.4
QL02p011637 Quercus lobata HOM05D005726 ORTHO05D001733 7.3e-21 104.4 139 43.2
Cpa.g.sc26.44 Carica papaya HOM05D005726 ORTHO05D001733 1.6e-20 103.2 130 43.8
MD05G1115600 Malus domestica HOM05D005726 ORTHO05D001733 1.6e-20 103.2 138 43.5
Prupe.8G160400 Prunus persica HOM05D005726 ORTHO05D001733 1.6e-20 103.2 139 48.2
TWI56G0219 Tripterygium wilfordii HOM05D005726 ORTHO05D001733 4.7e-20 101.7 139 43.2
TAR376G0138 Trochodendron aralioides HOM05D005726 ORTHO05D001733 6.1e-20 101.3 127 44.9
Haze_22635 Corylus avellana HOM05D005726 ORTHO05D001733 8.0e-20 100.9 139 41.7
Atru.chr13.290 Acer truncatum HOM05D005726 ORTHO05D001733 1.0e-19 100.5 138 39.9
Thecc.02G067200 Theobroma cacao HOM05D005726 ORTHO05D001733 1.0e-19 100.5 137 38.0
Manes.05G147300 Manihot esculenta HOM05D005726 ORTHO05D001733 2.3e-19 99.4 138 40.6
CANSAT01G1229 Cannabis sativa HOM05D005726 ORTHO05D001733 6.8e-19 97.8 145 36.6
CiPaw.05G077000 Carya illinoinensis HOM05D005726 ORTHO05D001733 6.8e-19 97.8 137 38.7
Potri.009G129301 Populus trichocarpa HOM05D005726 ORTHO05D001733 6.8e-19 97.8 138 39.1
Ciclev10003161m.g Citrus clementina HOM05D005726 ORTHO05D001733 8.9e-19 97.4 138 42.0
COL.COLO4_17253 Corchorus olitorius HOM05D005726 ORTHO05D001733 8.9e-19 97.4 134 36.6
Glyma.04G024200 Glycine max HOM05D005726 ORTHO05D001733 1.2e-18 97.1 139 38.8
Duzib132G0889 Durio zibethinus HOM05D005726 ORTHO05D001733 1.5e-18 96.7 133 37.6
MD10G1118100 Malus domestica HOM05D005726 ORTHO05D001733 2.6e-18 95.9 136 43.4
Haze_02200 Corylus avellana HOM05D005726 ORTHO05D001733 5.8e-18 94.7 140 39.3
Cfa005182 Carpinus fangiana HOM05D005726 ORTHO05D001733 7.5e-18 94.4 140 38.6
Nn5g30142 Nelumbo nucifera HOM05D005726 ORTHO05D001733 9.8e-18 94.0 137 38.0
QL11p047517 Quercus lobata HOM05D005726 ORTHO05D001733 9.8e-18 94.0 137 41.6
Gohir.A12G039400 Gossypium hirsutum HOM05D005726 ORTHO05D001733 1.3e-17 93.6 138 40.6
Oeu037538.1 Olea europaea HOM05D005726 ORTHO05D001733 1.3e-17 93.6 134 40.3
Cpa.g.sc37.193 Carica papaya HOM05D005726 ORTHO05D001733 1.7e-17 93.2 137 39.4
MBI05_g33718_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 1.7e-17 93.2 137 36.5
PSO170G6562 Papaver somniferum HOM05D005726 ORTHO05D001733 2.2e-17 92.8 149 36.9
Potri.002G022100 Populus trichocarpa HOM05D005726 ORTHO05D001733 2.2e-17 92.8 135 35.6
Ciclev10029543m.g Citrus clementina HOM05D005726 ORTHO05D001733 2.9e-17 92.4 139 38.8
Potri.004G167800 Populus trichocarpa HOM05D005726 ORTHO05D001733 2.9e-17 92.4 139 38.1
Ciclev10029854m.g Citrus clementina HOM05D005726 ORTHO05D001733 3.7e-17 92.0 139 38.8
FAN04G1699 Fragaria x ananassa HOM05D005726 ORTHO05D001733 4.9e-17 91.7 122 44.3
Migut.N01283 Erythranthe guttata HOM05D005726 ORTHO05D001733 6.4e-17 91.3 136 40.4
Gohir.D12G033000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 1.1e-16 90.5 138 39.9
Gorai.008G033800 Gossypium raimondii HOM05D005726 ORTHO05D001733 1.1e-16 90.5 138 39.9
MD08G1013100 Malus domestica HOM05D005726 ORTHO05D001733 1.4e-16 90.1 135 40.7
Phvul.009G017000 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 1.9e-16 89.7 143 37.8
Eucgr.F00586 Eucalyptus grandis HOM05D005726 ORTHO05D001733 2.4e-16 89.4 135 36.3
Oeu027542.1 Olea europaea HOM05D005726 ORTHO05D001733 5.4e-16 88.2 134 38.8
RcHm_v2.0_Chr6g0302871 Rosa chinensis HOM05D005726 ORTHO05D001733 7.0e-16 87.8 127 41.7
VMungo1309G2498 Vigna mungo HOM05D005726 ORTHO05D001733 7.0e-16 87.8 143 38.5
CsaV3_2G029540 Cucumis sativus L. HOM05D005726 ORTHO05D001733 1.2e-15 87.0 143 35.0
ATR0810G150 Amborella trichopoda HOM05D005726 ORTHO05D001733 1.6e-15 86.7 137 38.0
DCAR_003698 Daucus carota HOM05D005726 ORTHO05D001733 3.5e-15 85.5 136 33.8
Nitab4.5_0002561g0020 Nicotiana tabacum HOM05D005726 ORTHO05D001733 3.9e-14 82.0 139 36.7
Sopen04g035070 Solanum pennellii HOM05D005726 ORTHO05D001733 3.9e-14 82.0 138 35.5
Lalb_Chr11g0061921 Lupinus albus HOM05D005726 ORTHO05D001733 5.0e-14 81.6 137 34.3
PGSC0003DMG400009937 Solanum tuberosum HOM05D005726 ORTHO05D001733 5.0e-14 81.6 138 34.8
Cc02_g16550 Coffea canephora HOM05D005726 ORTHO05D001733 3.3e-13 79.0 141 36.9
PGR031G2508 Punica granatum HOM05D005726 ORTHO05D001733 4.3e-13 78.6 137 38.0
CANSAT25G0582 Cannabis sativa HOM05D005726 ORTHO05D001733 7.3e-13 77.8 137 33.6
Actinidia00594 Actinidia chinensis HOM05D005726 ORTHO05D001733 1.2e-12 77.0 120 37.5
Sabra09G0098800 Salix brachista HOM05D005726 ORTHO05D001733 1.6e-12 76.6 127 35.4
Lsat_1_v5_gn_2_9581 Lactuca sativa HOM05D005726 ORTHO05D001733 1.1e-11 73.9 136 35.3
Manes.04G078400 Manihot esculenta HOM05D005726 ORTHO05D001733 1.1e-11 73.9 138 34.8
ClCG05G018250 Citrullus lanatus HOM05D005726 ORTHO05D001733 3.1e-11 72.4 135 34.8
Migut.C00838 Erythranthe guttata HOM05D005726 ORTHO05D001733 2.0e-10 69.7 121 36.4
SHI08068 Sapria himalayana HOM05D005726 ORTHO05D001733 4.4e-10 68.6 110 37.3
CsaV3_3G045890 Cucumis sativus L. HOM05D005726 ORTHO05D001733 5.8e-10 68.2 135 33.3
Sed0014046 Sechium edule HOM05D005726 ORTHO05D001733 7.5e-10 67.8 131 35.1
THA.LOC104807528 Tarenaya hassleriana HOM05D003064 ORTHO05D001733 1.3e-09 67.0 110 40.0
MELO3C003749.2 Cucumis melo HOM05D005726 ORTHO05D001733 2.2e-09 66.2 135 32.6
TPR.G34542 Trifolium pratense HOM05D005726 ORTHO05D001733 3.7e-09 65.5 117 34.2
Prupe.1G365100 Prunus persica HOM05D005726 ORTHO05D001733 4.9e-09 65.1 139 32.4
TPR.G38487 Trifolium pratense HOM05D005726 ORTHO05D001733 8.3e-09 64.3 79 41.8
Gorai.004G017800 Gossypium raimondii HOM05D003064 ORTHO05D001733 1.1e-08 63.9 111 36.9
Ah.11g039720 Amaranthus hybridus HOM05D005726 ORTHO05D001733 1.4e-08 63.5 128 35.2
Gohir.D08G022500 Gossypium hirsutum HOM05D003064 ORTHO05D001733 1.9e-08 63.2 111 36.9
Gohir.A08G012000 Gossypium hirsutum HOM05D003064 ORTHO05D001733 2.4e-08 62.8 111 36.9
Migut.N03162 Erythranthe guttata HOM05D005726 ORTHO05D001733 3.2e-08 62.4 134 33.6
Medtr3g113930 Medicago truncatula HOM05D005726 ORTHO05D001733 4.1e-08 62.0 116 31.9
Nn2g15754 Nelumbo nucifera HOM05D003064 ORTHO05D001733 7.1e-08 61.2 115 33.0
Gohir.A13G213900 Gossypium hirsutum HOM05D003064 ORTHO05D001733 2.1e-07 59.7 110 36.4
Gohir.D13G217700 Gossypium hirsutum HOM05D003064 ORTHO05D001733 2.1e-07 59.7 110 36.4
Gorai.013G248300 Gossypium raimondii HOM05D003064 ORTHO05D001733 2.1e-07 59.7 110 36.4
MELO3C020779.2 Cucumis melo HOM05D005726 ORTHO05D001733 2.7e-07 59.3 132 34.8
Peaxi162Scf00400g00087 Petunia axillaris HOM05D005726 ORTHO05D001733 2.7e-07 59.3 123 32.5
Peaxi162Scf00438g00833 Petunia axillaris HOM05D005726 ORTHO05D001733 3.5e-07 58.9 138 31.9
DCAR_006051 Daucus carota HOM05D005726 ORTHO05D001733 7.8e-07 57.8 118 33.9
TAR623G1618 Trochodendron aralioides HOM05D003064 ORTHO05D001733 7.8e-07 57.8 115 35.7
EL10Ac1g02194 Beta vulgaris HOM05D005726 ORTHO05D001733 1.3e-06 57.0 128 32.8
TAR369G0713 Trochodendron aralioides HOM05D003064 ORTHO05D001733 1.3e-06 57.0 113 35.4
TAR633G1282 Trochodendron aralioides HOM05D003064 ORTHO05D001733 1.3e-06 57.0 123 31.7
THA.LOC104811059 Tarenaya hassleriana HOM05D003064 ORTHO05D001733 2.3e-06 56.2 110 33.6
BcaB07g30277 Brassica carinata HOM05D005726 ORTHO05D001733 3.0e-06 55.8 36 80.6
ClCG02G004310 Citrullus lanatus HOM05D007714 ORTHO05D009659 3.9e-06 55.5 122 32.8
CsaV3_2G015680 Cucumis sativus L. HOM05D005726 ORTHO05D001733 3.9e-06 55.5 132 34.1
MELO3C014664.2 Cucumis melo HOM05D003064 ORTHO05D001733 5.1e-06 55.1 108 31.5
Duzib150G0559 Durio zibethinus HOM05D003064 ORTHO05D001733 5.1e-06 55.1 110 34.5
Eucgr.B03628 Eucalyptus grandis HOM05D003064 ORTHO05D001733 5.1e-06 55.1 107 35.5
PGR042G3858 Punica granatum HOM05D005726 ORTHO05D001733 5.1e-06 55.1 152 32.9
Potri.009G024500 Populus trichocarpa HOM05D003064 ORTHO05D001733 6.6e-06 54.7 115 35.7
Solyc04g081460.2 Solanum lycopersicum HOM05D005726 ORTHO05D001733 6.6e-06 54.7 61 42.6
BcaC03g15831 Brassica carinata HOM05D003064 ORTHO05D001733 8.6e-06 54.3 110 35.5
Medtr4g094472 Medicago truncatula HOM05D018548 ORTHO05D020752 8.6e-06 54.3 140 33.6


User provided reference genes

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