Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p10690 Brassica napus HOM05D004451 ORTHO05D005177 4.0e-157 558.1 299 100.0
BolC9t54158H Brassica oleracea HOM05D004451 ORTHO05D005177 4.3e-151 538.1 299 96.7
BcaB07g31794 Brassica carinata HOM05D004451 ORTHO05D005177 9.8e-148 526.9 299 94.6
C09p12690 Brassica napus HOM05D004451 ORTHO05D005177 2.2e-147 525.8 293 97.3
BraA09t36712Z Brassica rapa HOM05D004451 ORTHO05D005177 4.6e-137 491.5 363 78.0
Sp3g28570 Schrenkiella parvula HOM05D004451 ORTHO05D005177 9.5e-135 483.8 299 88.3
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 3.4e-132 475.3 261 96.9
BcaC06g36051 Brassica carinata HOM05D004451 ORTHO05D005177 1.0e-128 463.8 299 84.9
Thhalv10022775m.g Eutrema salsugineum HOM05D004451 ORTHO05D005177 1.5e-127 459.9 299 84.9
BcaB08g34587 Brassica carinata HOM05D004451 ORTHO05D005177 3.3e-127 458.8 299 85.3
BcaB03g16278 Brassica carinata HOM05D004451 ORTHO05D005177 9.6e-127 457.2 293 85.0
A07p05320 Brassica napus HOM05D004451 ORTHO05D005177 1.8e-125 453.0 299 84.3
BraA07t28325Z Brassica rapa HOM05D004451 ORTHO05D005177 1.8e-125 453.0 299 84.3
AT2G15290 Arabidopsis thaliana HOM05D004451 ORTHO05D005177 1.5e-124 449.9 304 81.6
C07p08470 Brassica napus HOM05D004451 ORTHO05D005177 2.6e-124 449.1 299 83.3
BolC7t41261H Brassica oleracea HOM05D004451 ORTHO05D005177 1.3e-123 446.8 299 83.3
AL3G47010 Arabidopsis lyrata HOM05D004451 ORTHO05D005177 2.4e-122 442.6 304 81.2
CARHR105660 Cardamine hirsuta HOM05D004451 ORTHO05D005177 4.6e-121 438.3 303 80.9
Carub.0003s2912 Capsella rubella HOM05D004451 ORTHO05D005177 6.2e-118 427.9 301 80.1
Aa31LG8G13140 Aethionema arabicum HOM05D004451 ORTHO05D005177 1.4e-117 426.8 303 79.2
THA.LOC104819557 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 1.3e-104 383.6 306 73.2
BcaC06g31580 Brassica carinata HOM05D004451 ORTHO05D005177 5.0e-91 338.6 193 94.3
THA.LOC104807244 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 5.5e-90 335.1 294 69.4
Cpa.g.sc106.89 Carica papaya HOM05D004451 ORTHO05D005177 4.6e-89 332.0 292 67.5
COL.COLO4_32599 Corchorus olitorius HOM05D004451 ORTHO05D005177 1.1e-87 327.4 306 64.4
Thecc.02G107400 Theobroma cacao HOM05D004451 ORTHO05D005177 1.5e-87 327.0 304 64.1
Gorai.013G047100 Gossypium raimondii HOM05D004451 ORTHO05D005177 3.7e-86 322.4 299 64.2
Nn1g04705 Nelumbo nucifera HOM05D004451 ORTHO05D005177 3.7e-86 322.4 301 63.5
Atru.chr5.2587 Acer truncatum HOM05D004451 ORTHO05D005177 6.3e-86 321.6 244 72.5
Gohir.D13G042200 Gossypium hirsutum HOM05D004451 ORTHO05D005177 6.3e-86 321.6 299 64.2
Glyma.10G261800 Glycine max HOM05D004451 ORTHO05D005177 1.1e-85 320.9 280 64.6
Gohir.A13G043700 Gossypium hirsutum HOM05D004451 ORTHO05D005177 1.8e-85 320.1 301 62.1
Gorai.005G235200 Gossypium raimondii HOM05D004451 ORTHO05D005177 1.8e-85 320.1 303 62.7
Gohir.A03G186500 Gossypium hirsutum HOM05D004451 ORTHO05D005177 2.4e-85 319.7 305 62.6
TAR628G0195 Trochodendron aralioides HOM05D004451 ORTHO05D005177 3.1e-85 319.3 301 62.5
Cc02_g19230 Coffea canephora HOM05D004451 ORTHO05D005177 4.1e-85 318.9 285 67.7
VMungo0720G2723 Vigna mungo HOM05D004451 ORTHO05D005177 4.1e-85 318.9 275 64.7
GSVIVG01003161001 Vitis vinifera HOM05D004451 ORTHO05D005177 6.9e-85 318.2 306 60.8
RcHm_v2.0_Chr6g0255371 Rosa chinensis HOM05D004451 ORTHO05D005177 9.1e-85 317.8 240 72.1
SalBow6G6827 Salvia bowleyana HOM05D004451 ORTHO05D005177 9.1e-85 317.8 299 62.2
Glyma.20G129100 Glycine max HOM05D004451 ORTHO05D005177 1.5e-84 317.0 280 63.6
SGA_v2.0_scaffold32G13039 Striga asiatica HOM05D004451 ORTHO05D005177 1.5e-84 317.0 275 66.2
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea HOM05D004451 ORTHO05D005177 2.0e-84 316.6 242 74.0
Phvul.007G040300 Phaseolus vulgaris HOM05D004451 ORTHO05D005177 2.0e-84 316.6 279 63.8
CANSAT25G2876 Cannabis sativa HOM05D004451 ORTHO05D005177 3.4e-84 315.8 302 64.2
Manes.07G069100 Manihot esculenta HOM05D004451 ORTHO05D005177 4.5e-84 315.5 215 76.3
CsaV3_7G008120 Cucumis sativus L. HOM05D004451 ORTHO05D005177 5.9e-84 315.1 294 64.3
ClCG02G006310 Citrullus lanatus HOM05D004451 ORTHO05D005177 7.7e-84 314.7 306 63.4
Medtr1g107450 Medicago truncatula HOM05D004451 ORTHO05D005177 7.7e-84 314.7 282 63.5
CANSAT25G0591 Cannabis sativa HOM05D004451 ORTHO05D005177 1.0e-83 314.3 302 63.9
Actinidia00412 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.3e-83 313.9 293 62.1
Rhsim05G0088400 Rhododendron simsii HOM05D004451 ORTHO05D005177 1.3e-83 313.9 306 63.4
Actinidia17478 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.7e-83 313.5 283 62.9
Haze_10166 Corylus avellana HOM05D004451 ORTHO05D005177 1.7e-83 313.5 273 67.0
HanXRQChr16g0514851 Helianthus annuus HOM05D004451 ORTHO05D005177 1.7e-83 313.5 273 67.0
TAR381G0562 Trochodendron aralioides HOM05D004451 ORTHO05D005177 1.7e-83 313.5 299 60.9
Gohir.D02G207300 Gossypium hirsutum HOM05D004451 ORTHO05D005177 2.2e-83 313.2 306 62.1
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea HOM05D004451 ORTHO05D005177 2.9e-83 312.8 276 65.9
Cfa004574 Carpinus fangiana HOM05D004451 ORTHO05D005177 2.9e-83 312.8 272 66.2
PGR142G3187 Punica granatum HOM05D004451 ORTHO05D005177 2.9e-83 312.8 306 61.1
FAN27G3473 Fragaria x ananassa HOM05D004451 ORTHO05D005177 3.8e-83 312.4 300 63.0
MSTRG.20184 Avicennia marina HOM05D004451 ORTHO05D005177 5.0e-83 312.0 218 76.1
Duzib248G1610 Durio zibethinus HOM05D004451 ORTHO05D005177 5.0e-83 312.0 291 61.5
Prupe.8G134600 Prunus persica HOM05D004451 ORTHO05D005177 6.5e-83 311.6 284 62.3
vmacro19448 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 6.5e-83 311.6 306 63.4
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla HOM05D004451 ORTHO05D005177 8.5e-83 311.2 219 76.3
FvH4_2g05240 Fragaria vesca HOM05D004451 ORTHO05D005177 1.1e-82 310.8 288 65.6
MD05G1088600 Malus domestica HOM05D004451 ORTHO05D005177 1.1e-82 310.8 284 64.8
QL11p033916 Quercus lobata HOM05D004451 ORTHO05D005177 1.1e-82 310.8 302 60.6
CSS0019678 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 1.4e-82 310.5 308 61.4
Sed0001090 Sechium edule HOM05D004451 ORTHO05D005177 1.4e-82 310.5 308 61.4
Oeu010397.1 Olea europaea HOM05D004451 ORTHO05D005177 1.9e-82 310.1 297 64.6
Duzib132G0413 Durio zibethinus HOM05D004451 ORTHO05D005177 2.5e-82 309.7 301 60.8
Migut.B00385 Erythranthe guttata HOM05D004451 ORTHO05D005177 2.5e-82 309.7 254 68.5
FAN20G1574 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.5e-82 309.7 273 66.7
Lj9C321G12 Lonicera japonica HOM05D004451 ORTHO05D005177 2.5e-82 309.7 207 80.2
Lalb_Chr02g0145321 Lupinus albus HOM05D004451 ORTHO05D005177 3.2e-82 309.3 220 76.4
Psat6g219200 Pisum sativum HOM05D004451 ORTHO05D005177 3.2e-82 309.3 220 75.0
Potri.009G096300 Populus trichocarpa HOM05D004451 ORTHO05D005177 3.2e-82 309.3 299 61.5
MELO3C018494.2 Cucumis melo HOM05D004451 ORTHO05D005177 4.2e-82 308.9 218 76.6
ECA234G3549 Erigeron canadensis HOM05D004451 ORTHO05D005177 4.2e-82 308.9 283 64.7
Lj5g0008999 Lotus japonicus HOM05D004451 ORTHO05D005177 4.2e-82 308.9 299 60.9
TWI31G0226 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 4.2e-82 308.9 259 67.2
Ciclev10029016m.g Citrus clementina HOM05D004451 ORTHO05D005177 5.5e-82 308.5 264 66.7
TWI79G0876 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 5.5e-82 308.5 257 65.0
Aqoxy5G01146 Aquilegia oxysepala HOM05D004451 ORTHO05D005177 9.4e-82 307.8 265 65.7
Manes.10G076300 Manihot esculenta HOM05D004451 ORTHO05D005177 9.4e-82 307.8 299 59.9
Potri.001G300500 Populus trichocarpa HOM05D004451 ORTHO05D005177 1.6e-81 307.0 300 61.7
CSS0017890 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 2.1e-81 306.6 295 62.7
CiPaw.05G011200 Carya illinoinensis HOM05D004451 ORTHO05D005177 2.1e-81 306.6 286 62.9
Oeu018597.1 Olea europaea HOM05D004451 ORTHO05D005177 3.6e-81 305.8 301 63.5
Lalb_Chr06g0165471 Lupinus albus HOM05D004451 ORTHO05D005177 4.7e-81 305.4 220 75.0
CiPaw.06G169600 Carya illinoinensis HOM05D004451 ORTHO05D005177 7.9e-81 304.7 285 62.1
Ca_11078_v3 Cicer arietinum L. HOM05D004451 ORTHO05D005177 7.9e-81 304.7 292 62.7
FAN15G2242 Fragaria x ananassa HOM05D004451 ORTHO05D005177 1.0e-80 304.3 285 64.9
Nitab4.5_0002815g0090 Nicotiana tabacum HOM05D004451 ORTHO05D005177 1.4e-80 303.9 252 69.8
PSO210G2671 Papaver somniferum HOM05D004451 ORTHO05D005177 1.8e-80 303.5 269 63.2
CSS0044080 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 2.3e-80 303.1 301 62.5
PSO170G0588 Papaver somniferum HOM05D004451 ORTHO05D005177 5.1e-80 302.0 269 63.2
MD10G1096700 Malus domestica HOM05D004451 ORTHO05D005177 6.7e-80 301.6 247 67.2
Sed0013348 Sechium edule HOM05D004451 ORTHO05D005177 3.3e-79 299.3 218 74.3
MSTRG.16716 Avicennia marina HOM05D004451 ORTHO05D005177 5.7e-79 298.5 279 63.1
Nn5g30419 Nelumbo nucifera HOM05D004451 ORTHO05D005177 5.7e-79 298.5 304 59.2
FAN24G2858 Fragaria x ananassa HOM05D004451 ORTHO05D005177 9.7e-79 297.7 224 73.2
CDE04G0259 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 2.2e-78 296.6 198 78.3
Hund00148 Selenicereus undatus HOM05D004451 ORTHO05D005177 2.2e-78 296.6 279 62.0
Lsat_1_v5_gn_5_114881 Lactuca sativa HOM05D004451 ORTHO05D005177 2.8e-78 296.2 284 62.3
DCAR_001641 Daucus carota HOM05D004451 ORTHO05D005177 3.7e-78 295.8 195 79.0
Actinidia05493 Actinidia chinensis HOM05D004451 ORTHO05D005177 4.8e-78 295.4 212 72.2
Hund06320 Selenicereus undatus HOM05D004451 ORTHO05D005177 8.2e-78 294.7 300 59.3
HanXRQChr10g0292341 Helianthus annuus HOM05D004451 ORTHO05D005177 1.1e-77 294.3 245 68.6
PGSC0003DMG400025865 Solanum tuberosum HOM05D004451 ORTHO05D005177 1.1e-77 294.3 217 72.8
AUR62039084 Chenopodium quinoa HOM05D004451 ORTHO05D005177 1.4e-77 293.9 260 65.0
Nitab4.5_0005392g0030 Nicotiana tabacum HOM05D004451 ORTHO05D005177 4.1e-77 292.4 293 59.4
Solyc01g107640.3 Solanum lycopersicum HOM05D004451 ORTHO05D005177 9.1e-77 291.2 287 61.3
Sopen01g049830 Solanum pennellii HOM05D004451 ORTHO05D005177 2.6e-76 289.7 287 61.3
AUR62010302 Chenopodium quinoa HOM05D004451 ORTHO05D005177 5.9e-76 288.5 217 72.4
Rhsim11G0160300 Rhododendron simsii HOM05D004451 ORTHO05D005177 1.3e-75 287.3 192 78.6
Ah.01g018220 Amaranthus hybridus HOM05D004451 ORTHO05D005177 1.7e-75 287.0 310 58.4
SGA_v2.0_scaffold225G43078 Striga asiatica HOM05D004451 ORTHO05D005177 2.9e-75 286.2 241 67.2
Sabra09G0074000 Salix brachista HOM05D004451 ORTHO05D005177 5.0e-75 285.4 358 52.0
EL10Ac9g22281 Beta vulgaris HOM05D004451 ORTHO05D005177 1.1e-74 284.3 240 66.2
Peaxi162Scf00016g02324 Petunia axillaris HOM05D004451 ORTHO05D005177 5.5e-74 282.0 283 61.5
Os02g0187600 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 1.2e-73 280.8 277 58.8
SEGI_03021 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 8.0e-73 278.1 208 70.7
Eucgr.E02954 Eucalyptus grandis HOM05D004451 ORTHO05D005177 1.8e-72 276.9 267 62.2
HPP92_004770 Vanilla planifolia HOM05D004451 ORTHO05D005177 5.2e-72 275.4 224 64.7
Sabra16G0188700 Salix brachista HOM05D004451 ORTHO05D005177 2.2e-70 270.0 363 49.3
Os06g0638100 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 1.1e-69 267.7 200 69.5
Zm00001eb206410 Zea mays HOM05D004451 ORTHO05D005177 4.5e-68 262.3 184 73.4
unitig_22.g5194 Utricularia gibba HOM05D004451 ORTHO05D005177 7.7e-68 261.5 241 60.6
Mapoly0049s0087 Marchantia polymorpha HOM05D004451 ORTHO05D005177 5.0e-67 258.8 268 56.7
Pp3c27_4260 Physcomitrium patens HOM05D004451 ORTHO05D005177 5.0e-67 258.8 253 60.1
Dinv15761 Davidia involucrata HOM05D004451 ORTHO05D005177 8.5e-67 258.1 189 72.0
Pp3c1_21740 Physcomitrium patens HOM05D004451 ORTHO05D005177 1.5e-66 257.3 255 57.6
Sc17g0003020 Simmondsia chinensis HOM05D004451 ORTHO05D005177 3.2e-66 256.1 278 58.3
vmacro19524 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 4.2e-66 255.8 372 48.4
Pp3c10_9500 Physcomitrium patens HOM05D004451 ORTHO05D005177 1.6e-65 253.8 204 65.2
Zm00001eb387350 Zea mays HOM05D004451 ORTHO05D005177 4.7e-65 252.3 263 55.1
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis HOM05D004451 ORTHO05D005177 2.0e-63 246.9 209 61.7
ATR0691G207 Amborella trichopoda HOM05D004451 ORTHO05D005177 3.3e-63 246.1 182 72.0
ECA240G4367 Erigeron canadensis HOM05D004451 ORTHO05D005177 3.7e-62 242.7 255 56.5
DCAR_021989 Daucus carota HOM05D004451 ORTHO05D005177 9.1e-61 238.0 207 62.8
unitig_8.g3679 Utricularia gibba HOM05D004451 ORTHO05D005177 2.9e-59 233.0 192 67.2
SMO118G0560 Selaginella moellendorffii HOM05D004451 ORTHO05D005177 4.1e-53 212.6 181 61.3
CBR_g39267 Chara braunii HOM05D004451 ORTHO05D005177 4.5e-52 209.1 206 57.3
vmacro02006 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 2.4e-45 186.8 194 58.2
SHI05289 Sapria himalayana HOM05D004451 ORTHO05D005177 4.5e-44 182.6 183 55.2
CDE06G1648 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 3.3e-42 176.4 173 58.4
TAR381G0937 Trochodendron aralioides HOM05D004451 ORTHO05D005177 1.0e-35 154.8 107 77.6
Zm00001eb234680 Zea mays HOM05D004451 ORTHO05D005177 1.3e-35 154.5 249 42.6
MCO10G127 Micromonas commoda HOM05D004451 ORTHO05D005177 1.2e-31 141.4 192 43.2
SEGI_11302 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 1.5e-31 141.0 102 71.6
Cre10.g454734 Chlamydomonas reinhardtii HOM05D000133 ORTHO05D005177 2.2e-30 137.1 252 37.3
CAN.G1231.10 Capsicum annuum HOM05D004451 ORTHO05D005177 6.4e-30 135.6 89 76.4
PRCOL_00004645 Prasinoderma coloniale HOM05D004451 ORTHO05D005177 9.5e-26 121.7 205 39.0
HPP92_008279 Vanilla planifolia HOM05D004451 ORTHO05D005177 2.0e-23 114.0 165 50.3
CAN.G3385.1 Capsicum annuum HOM05D004451 ORTHO05D005177 1.3e-19 101.3 78 71.8
CBR_g28861 Chara braunii HOM05D004451 ORTHO05D009492 1.7e-19 100.9 87 58.6
HanXRQChr01g0018911 Helianthus annuus HOM05D004451 ORTHO05D005177 9.5e-18 95.1 63 77.8
HanXRQChr17g0567381 Helianthus annuus HOM05D004451 ORTHO05D005177 2.8e-17 93.6 63 76.2
Cre11.g467759 Chlamydomonas reinhardtii HOM05D027551 ORTHO05D005177 2.4e-13 80.5 169 36.1
HanXRQChr05g0151971 Helianthus annuus HOM05D002664 ORTHO05D002974 4.3e-10 69.7 42 81.0
VMungo0251G3374 Vigna mungo HOM05D004451 ORTHO05D005177 7.6e-07 58.9 103 38.8


User provided reference genes

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