Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 2.0e-75 285.8 159 100.0
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 4.5e-75 284.6 159 99.4
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 5.5e-73 277.7 159 97.5
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 7.2e-73 277.3 159 97.5
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 9.4e-73 276.9 159 97.5
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 2.1e-72 275.8 157 97.5
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 6.8e-71 270.8 157 95.5
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 8.8e-71 270.4 156 96.2
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 2.0e-70 269.2 157 95.5
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 3.4e-70 268.5 157 94.3
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 3.4e-70 268.5 157 94.9
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 5.7e-70 267.7 157 94.9
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 7.5e-70 267.3 157 94.9
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 1.1e-68 263.5 157 93.0
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 3.5e-67 258.5 157 92.4
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.0e-66 256.9 150 95.3
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 6.8e-63 244.2 153 88.2
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 5.9e-59 231.1 157 83.4
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 4.0e-55 218.4 148 79.7
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 4.0e-55 218.4 149 78.5
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 7.5e-54 214.2 154 76.0
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 7.5e-54 214.2 154 76.0
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.7e-53 213.0 144 79.2
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.2e-53 212.6 154 77.3
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 2.4e-52 209.1 147 77.6
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 3.2e-52 208.8 153 72.5
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 7.0e-52 207.6 152 75.0
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 7.0e-52 207.6 152 75.0
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 9.2e-52 207.2 147 76.2
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 9.2e-52 207.2 154 73.4
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 9.2e-52 207.2 155 76.1
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 9.2e-52 207.2 151 73.5
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 1.2e-51 206.8 153 71.9
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 1.2e-51 206.8 154 74.0
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 1.2e-51 206.8 149 78.5
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 1.2e-51 206.8 161 72.7
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 2.0e-51 206.1 147 76.2
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 2.0e-51 206.1 148 77.0
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 2.0e-51 206.1 149 78.5
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 3.5e-51 205.3 148 76.4
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 4.6e-51 204.9 153 71.2
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.9e-51 204.5 155 74.8
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 5.9e-51 204.5 140 79.3
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 5.9e-51 204.5 148 77.0
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 7.8e-51 204.1 148 75.0
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 7.8e-51 204.1 145 77.9
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.0e-50 203.8 148 75.7
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.3e-50 203.4 155 74.2
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.3e-50 203.4 154 72.7
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.7e-50 203.0 141 78.0
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.7e-50 203.0 153 75.8
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 3.9e-50 201.8 154 74.7
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.9e-50 201.8 155 73.5
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.9e-50 201.8 155 73.5
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 3.9e-50 201.8 150 71.3
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 5.0e-50 201.4 154 71.4
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 5.0e-50 201.4 149 77.2
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 5.0e-50 201.4 148 75.0
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 6.6e-50 201.1 149 75.2
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 8.6e-50 200.7 148 74.3
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 1.1e-49 200.3 140 78.6
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.1e-49 200.3 148 75.0
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 5.6e-49 198.0 154 69.5
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 1.2e-48 196.8 145 73.1
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 3.6e-48 195.3 154 71.4
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 6.2e-48 194.5 149 71.1
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 6.2e-48 194.5 148 72.3
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 8.0e-48 194.1 149 73.2
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 8.0e-48 194.1 149 73.2
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 8.0e-48 194.1 142 73.9
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 1.0e-47 193.7 147 71.4
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 1.8e-47 193.0 146 73.3
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 1.8e-47 193.0 150 75.3
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 4.0e-47 191.8 149 71.8
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 5.2e-47 191.4 134 78.4
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 8.9e-47 190.7 154 66.2
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.2e-46 190.3 147 69.4
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 2.6e-46 189.1 145 70.3
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 9.8e-46 187.2 144 70.1
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 2.9e-45 185.7 148 70.3
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 2.9e-45 185.7 148 70.3
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.1e-44 183.7 149 67.1
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 1.4e-44 183.3 142 68.3
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 5.4e-44 181.4 153 68.0
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 5.4e-44 181.4 155 67.1
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 2.7e-43 179.1 145 67.6
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 2.7e-43 179.1 140 67.9
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.7e-42 176.4 144 66.0
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 6.6e-42 174.5 154 65.6
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 3.3e-41 172.2 145 62.1
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 1.6e-40 169.9 147 66.7
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 3.1e-39 165.6 154 64.9
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 5.2e-39 164.9 151 65.6
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 8.9e-39 164.1 147 66.7
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 4.9e-37 158.3 122 74.6
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 5.4e-36 154.8 148 62.8
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 7.1e-36 154.5 212 47.6
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 2.1e-35 152.9 154 60.4
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 4.6e-35 151.8 113 77.0
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 1.3e-34 150.2 146 54.8
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 3.0e-34 149.1 143 62.9
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 5.1e-34 148.3 110 74.5
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 8.6e-34 147.5 154 57.1
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.1e-33 147.1 148 59.5
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 9.5e-33 144.1 138 54.3
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 9.5e-33 144.1 140 58.6
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.2e-32 143.7 175 54.3
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.8e-32 142.5 144 59.7
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 5.8e-30 134.8 143 58.7
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 2.9e-29 132.5 111 69.4
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 1.4e-28 130.2 110 66.4
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 1.9e-28 129.8 113 62.8
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 3.2e-28 129.0 114 63.2
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 2.7e-27 125.9 150 55.3
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 3.5e-27 125.6 136 48.5
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 4.6e-27 125.2 106 66.0
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 7.8e-27 124.4 120 59.2
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.7e-26 123.2 143 55.2
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 1.7e-26 123.2 143 55.2
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 6.6e-26 121.3 92 75.0
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 3.4e-22 109.0 126 57.1
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.3e-21 107.1 81 75.3
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 1.4e-15 87.0 65 72.3
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 4.2e-12 75.5 138 37.7
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.0e-10 69.3 128 41.4
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 5.6e-09 65.1 54 59.3
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.6e-08 63.5 45 68.9
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 2.4e-07 59.7 44 68.2
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 3.1e-07 59.3 138 29.7


User provided reference genes

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