Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p08140 Brassica napus HOM05D006995 ORTHO05D008870 1.5e-39 166.0 102 100.0
BraA09t36465Z Brassica rapa HOM05D006995 ORTHO05D008870 9.7e-39 163.3 100 95.0
BraA06t25934Z Brassica rapa HOM05D006995 ORTHO05D008870 1.1e-37 159.8 102 92.2
A06p29860 Brassica napus HOM05D006995 ORTHO05D008870 5.3e-37 157.5 102 91.2
BcaB02g09725 Brassica carinata HOM05D006995 ORTHO05D008870 9.1e-37 156.8 102 90.2
BolC3t18607H Brassica oleracea HOM05D006995 ORTHO05D008870 2.7e-36 155.2 102 90.2
AL8G40200 Arabidopsis lyrata HOM05D006995 ORTHO05D008870 5.9e-36 154.1 102 88.2
Sp2g26260 Schrenkiella parvula HOM05D006995 ORTHO05D008870 1.3e-35 152.9 102 79.4
AT5G63135 Arabidopsis thaliana HOM05D006995 ORTHO05D008870 5.5e-34 147.5 102 87.3
Aa31LG1G18840 Aethionema arabicum HOM05D006995 ORTHO05D008870 1.2e-33 146.4 102 74.5
CARHR276970 Cardamine hirsuta HOM05D006995 ORTHO05D008870 1.0e-32 143.3 102 81.4
BcaC01g02557 Brassica carinata HOM05D006995 ORTHO05D008870 3.0e-32 141.7 102 84.3
C03p63500 Brassica napus HOM05D006995 ORTHO05D008870 3.0e-32 141.7 102 84.3
Carub.0008s2389 Capsella rubella HOM05D006995 ORTHO05D008870 1.5e-31 139.4 102 83.3
THA.LOC104798964 Tarenaya hassleriana HOM05D006995 ORTHO05D008870 4.4e-31 137.9 102 79.4
Thhalv10023776m.g Eutrema salsugineum HOM05D006995 ORTHO05D008870 9.8e-31 136.7 102 78.4
BcaC04g23358 Brassica carinata HOM05D006995 ORTHO05D008870 1.3e-30 136.3 72 91.7
C09p09200 Brassica napus HOM05D006995 ORTHO05D008870 1.3e-30 136.3 72 91.7
BolC9t53833H Brassica oleracea HOM05D006995 ORTHO05D008870 1.3e-30 136.3 72 91.7
Manes.14G061000 Manihot esculenta HOM05D006995 ORTHO05D008870 2.3e-24 115.5 102 69.6
Prupe.5G166100 Prunus persica HOM05D006995 ORTHO05D008870 1.2e-23 113.2 102 61.8
Potri.012G085100 Populus trichocarpa HOM05D006995 ORTHO05D008870 1.5e-23 112.8 102 65.7
MD14G1172000 Malus domestica HOM05D006995 ORTHO05D008870 3.4e-23 111.7 102 64.7
Oeu008873.1 Olea europaea HOM05D006995 ORTHO05D008870 3.4e-23 111.7 102 62.7
Peaxi162Scf00089g01427 Petunia axillaris HOM05D006995 ORTHO05D008870 3.4e-23 111.7 102 55.9
MSTRG.23164 Avicennia marina HOM05D006995 ORTHO05D008870 9.8e-23 110.2 102 63.7
Phvul.009G174500 Phaseolus vulgaris HOM05D006995 ORTHO05D008870 1.3e-22 109.8 102 68.6
TWI39G0505 Tripterygium wilfordii HOM05D006995 ORTHO05D008870 1.3e-22 109.8 102 72.5
MSTRG.11491 Avicennia marina HOM05D006995 ORTHO05D008870 1.7e-22 109.4 102 63.7
Cc04_g11640 Coffea canephora HOM05D006995 ORTHO05D008870 1.7e-22 109.4 102 60.8
Ca_16134_v3 Cicer arietinum L. HOM05D006995 ORTHO05D008870 3.7e-22 108.2 102 67.6
Psat5g116320 Pisum sativum HOM05D006995 ORTHO05D008870 3.7e-22 108.2 102 61.8
Glyma.04G187800 Glycine max HOM05D006995 ORTHO05D008870 4.9e-22 107.8 102 65.7
Lj9C443G5 Lonicera japonica HOM05D006995 ORTHO05D008870 4.9e-22 107.8 102 60.8
TWI23G0026 Tripterygium wilfordii HOM05D006995 ORTHO05D008870 4.9e-22 107.8 102 65.7
SalBow5G1368 Salvia bowleyana HOM05D006995 ORTHO05D008870 1.1e-21 106.7 102 63.7
SalBow5G3606 Salvia bowleyana HOM05D006995 ORTHO05D008870 1.1e-21 106.7 102 63.7
Hma1.2p1_0046F.1_g027080 Hydrangea macrophylla HOM05D006995 ORTHO05D008870 1.8e-21 105.9 102 61.8
RcHm_v2.0_Chr7g0192611 Rosa chinensis HOM05D006995 ORTHO05D008870 2.4e-21 105.5 102 60.8
FAN08G0020 Fragaria x ananassa HOM05D006995 ORTHO05D008870 3.1e-21 105.1 102 60.8
FvH4_5g06250 Fragaria vesca HOM05D006995 ORTHO05D008870 4.1e-21 104.8 102 60.8
Dinv20602 Davidia involucrata HOM05D006995 ORTHO05D008870 5.4e-21 104.4 102 52.9
Lj1g0014247 Lotus japonicus HOM05D006995 ORTHO05D008870 5.4e-21 104.4 102 62.7
unitig_26.g8807 Utricularia gibba HOM05D006995 ORTHO05D008870 5.4e-21 104.4 102 55.9
Actinidia24594 Actinidia chinensis HOM05D006995 ORTHO05D008870 9.2e-21 103.6 102 59.8
FAN18G0637 Fragaria x ananassa HOM05D006995 ORTHO05D008870 9.2e-21 103.6 102 59.8
Glyma.06G177900 Glycine max HOM05D006995 ORTHO05D008870 9.2e-21 103.6 102 63.7
CSS0043708 Camellia sinensis var. sinensis HOM05D006995 ORTHO05D008870 1.2e-20 103.2 102 52.0
TAR629G0625 Trochodendron aralioides HOM05D006995 ORTHO05D008870 1.2e-20 103.2 102 59.8
arahy.Tifrunner.gnm1.ann1.W5ECLN Arachis hypogaea HOM05D006995 ORTHO05D008870 1.6e-20 102.8 102 61.8
arahy.Tifrunner.gnm1.ann1.X0DT51 Arachis hypogaea HOM05D006995 ORTHO05D008870 1.6e-20 102.8 102 61.8
ClCG01G013460 Citrullus lanatus HOM05D006995 ORTHO05D008870 1.6e-20 102.8 73 65.8
MELO3C002295.2 Cucumis melo HOM05D006995 ORTHO05D008870 1.6e-20 102.8 73 65.8
Nitab4.5_0001793g0100 Nicotiana tabacum HOM05D006995 ORTHO05D008870 2.0e-20 102.4 102 65.7
Nitab4.5_0003703g0070 Nicotiana tabacum HOM05D006995 ORTHO05D008870 2.0e-20 102.4 102 65.7
CsaV3_1G008810 Cucumis sativus L. HOM05D006995 ORTHO05D008870 3.5e-20 101.7 73 65.8
Lalb_Chr08g0236711 Lupinus albus HOM05D006995 ORTHO05D008870 5.9e-20 100.9 73 64.4
VMungo1309G2685 Vigna mungo HOM05D006995 ORTHO05D008870 7.8e-20 100.5 94 63.8
Solyc03g112290.2 Solanum lycopersicum HOM05D006995 ORTHO05D008870 2.3e-19 99.0 102 63.7
Sopen03g031390 Solanum pennellii HOM05D006995 ORTHO05D008870 2.3e-19 99.0 102 63.7
PGSC0003DMG400018185 Solanum tuberosum HOM05D006995 ORTHO05D008870 5.0e-19 97.8 102 62.7
Atru.chr9.2568 Acer truncatum HOM05D006995 ORTHO05D008870 6.6e-19 97.4 69 68.1
Lsat_1_v5_gn_5_14241 Lactuca sativa HOM05D006995 ORTHO05D008870 6.6e-19 97.4 100 60.0
Sed0018383 Sechium edule HOM05D006995 ORTHO05D008870 6.6e-19 97.4 73 63.0
Migut.O00152 Erythranthe guttata HOM05D006995 ORTHO05D008870 8.6e-19 97.1 95 52.6
Eucgr.K02801 Eucalyptus grandis HOM05D006995 ORTHO05D008870 1.1e-18 96.7 68 64.7
Medtr3g077017 Medicago truncatula HOM05D006995 ORTHO05D008870 1.5e-18 96.3 102 63.7
QL10p006993 Quercus lobata HOM05D006995 ORTHO05D008870 1.9e-18 95.9 73 61.6
Nn4g22611 Nelumbo nucifera HOM05D006995 ORTHO05D008870 2.5e-18 95.5 102 55.9
CAN.G338.27 Capsicum annuum HOM05D006995 ORTHO05D008870 3.3e-18 95.1 102 61.8
HanXRQChr04g0101331 Helianthus annuus HOM05D006995 ORTHO05D008870 4.3e-18 94.7 102 60.8
Thecc.03G024900 Theobroma cacao HOM05D006995 ORTHO05D008870 5.6e-18 94.4 72 62.5
CANSAT80G0726 Cannabis sativa HOM05D006995 ORTHO05D008870 9.5e-18 93.6 102 63.7
BolC3t18603H Brassica oleracea HOM05D006995 ORTHO05D008870 1.6e-17 92.8 48 95.8
CiPaw.11G020900 Carya illinoinensis HOM05D006995 ORTHO05D008870 2.1e-17 92.4 66 63.6
Gohir.A12G199700 Gossypium hirsutum HOM05D006995 ORTHO05D008870 2.8e-17 92.0 73 60.3
Gorai.008G217400 Gossypium raimondii HOM05D006995 ORTHO05D008870 2.8e-17 92.0 73 60.3
Duzib205G0595 Durio zibethinus HOM05D006995 ORTHO05D008870 3.6e-17 91.7 73 61.6
Cpa.g.sc159.33 Carica papaya HOM05D006995 ORTHO05D008870 8.0e-17 90.5 73 61.6
PGR044G0957 Punica granatum HOM05D006995 ORTHO05D008870 8.9e-16 87.0 93 60.2
Gohir.D12G202400 Gossypium hirsutum HOM05D006995 ORTHO05D008870 2.0e-15 85.9 73 60.3
CiPaw.12G030600 Carya illinoinensis HOM05D006995 ORTHO05D008870 3.4e-15 85.1 102 49.0
Ca_22795_v3 Cicer arietinum L. HOM05D001863 ORTHO05D001962 1.7e-14 82.8 80 56.2
ATR0824G277 Amborella trichopoda HOM05D006995 ORTHO05D008870 8.3e-14 80.5 102 49.0
vmacro16643 Vaccinium macrocarpon HOM05D006995 ORTHO05D008870 1.1e-13 80.1 133 45.9
Aqoxy5G03762 Aquilegia oxysepala HOM05D006995 ORTHO05D008870 1.4e-13 79.7 102 49.0
Hund02782 Selenicereus undatus HOM05D006995 ORTHO05D008870 3.2e-13 78.6 102 51.0
HPP92_024272 Vanilla planifolia HOM05D006995 ORTHO05D008870 7.0e-13 77.4 102 48.0
Sc04g0001540 Simmondsia chinensis HOM05D006995 ORTHO05D008870 9.2e-13 77.0 102 49.0
SGA_v2.0_scaffold90G27846 Striga asiatica HOM05D006995 ORTHO05D008870 9.2e-13 77.0 53 67.9
COL.COLO4_05561 Corchorus olitorius HOM05D006995 ORTHO05D008870 7.8e-12 73.9 48 72.9
ATR0743G118 Amborella trichopoda HOM05D006995 ORTHO05D008870 1.3e-11 73.2 102 45.1
Ah.11g042030 Amaranthus hybridus HOM05D006995 ORTHO05D008870 2.3e-11 72.4 92 54.3
EL10Ac5g10662 Beta vulgaris HOM05D006995 ORTHO05D008870 2.3e-11 72.4 102 52.9
Zm00001eb183600 Zea mays HOM05D006995 ORTHO05D008870 3.0e-11 72.0 102 45.1
Os02g0593400 Oryza sativa ssp. japonica HOM05D006995 ORTHO05D008870 3.9e-11 71.6 102 45.1
Zm00001eb245930 Zea mays HOM05D006995 ORTHO05D008870 6.6e-11 70.9 102 44.1
Sabra12G0061300 Salix brachista HOM05D006995 ORTHO05D008870 1.1e-10 70.1 62 58.1
Haze_07576 Corylus avellana HOM05D006995 ORTHO05D008870 1.9e-10 69.3 48 66.7
BcaC01g05868 Brassica carinata HOM05D001146 ORTHO05D000973 2.5e-10 68.9 43 86.0
C03p21590 Brassica napus HOM05D001146 ORTHO05D000973 2.5e-10 68.9 43 86.0
BolC3t14543H Brassica oleracea HOM05D006995 ORTHO05D104637 2.5e-10 68.9 43 86.0
C06p19720 Brassica napus HOM05D001146 ORTHO05D000973 7.3e-10 67.4 41 85.4
C07p20090 Brassica napus HOM05D001146 ORTHO05D000973 7.3e-10 67.4 43 83.7
BolC7t42530H Brassica oleracea HOM05D001146 ORTHO05D000973 7.3e-10 67.4 43 83.7
Ah.11g051120 Amaranthus hybridus HOM05D006995 ORTHO05D008870 4.7e-09 64.7 82 59.8
ECA247G3417 Erigeron canadensis HOM05D006995 ORTHO05D008870 1.1e-08 63.5 95 55.8
SHI24880 Sapria himalayana HOM05D006995 ORTHO05D008870 1.8e-08 62.8 89 42.7
AUR62008151 Chenopodium quinoa HOM05D006995 ORTHO05D008870 6.8e-08 60.8 57 54.4
BcaC04g20222 Brassica carinata HOM05D001146 ORTHO05D000973 1.2e-07 60.1 37 83.8
C04p43920 Brassica napus HOM05D001146 ORTHO05D000973 1.2e-07 60.1 30 93.3
C09p46490 Brassica napus HOM05D001146 ORTHO05D000973 1.2e-07 60.1 37 83.8
BolC4t25973H Brassica oleracea HOM05D001146 ORTHO05D000973 1.2e-07 60.1 30 93.3
BcaC09g51351 Brassica carinata HOM05D006995 ORTHO05D008870 1.5e-07 59.7 52 57.7
BolC7t43312H Brassica oleracea HOM05D001146 ORTHO05D000973 5.8e-07 57.8 30 90.0
MELO3C035410.2 Cucumis melo HOM05D006995 ORTHO05D167536 1.3e-06 56.6 45 60.0
GSVIVG01007657001 Vitis vinifera HOM05D006995 ORTHO05D008870 1.3e-06 56.6 63 57.1


User provided reference genes

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