Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p05670 Brassica napus HOM05D001035 ORTHO05D101404 1.9e-43 178.7 87 100.0
C03p24450 Brassica napus HOM05D001035 ORTHO05D098786 2.4e-17 92.0 69 66.7
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 1.3e-15 86.3 66 72.7
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 2.1e-10 68.9 50 70.0
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 2.1e-10 68.9 50 70.0
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 2.1e-10 68.9 50 70.0
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 3.6e-10 68.2 50 70.0
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 8.1e-10 67.0 50 68.0
BcaB04g20010 Brassica carinata HOM05D001035 ORTHO05D021752 1.2e-08 63.2 42 76.2
BcaB08g37324 Brassica carinata HOM05D001035 ORTHO05D001045 3.4e-08 61.6 42 73.8
BcaC04g19473 Brassica carinata HOM05D001035 ORTHO05D001045 3.4e-08 61.6 42 73.8
BolC9t58397H Brassica oleracea HOM05D001035 ORTHO05D001045 3.4e-08 61.6 42 73.8
BraA10t44000Z Brassica rapa HOM05D001035 ORTHO05D001045 3.4e-08 61.6 42 73.8
BcaB08g34772 Brassica carinata HOM05D001035 ORTHO05D006315 9.9e-08 60.1 42 73.8
BcaB05g22811 Brassica carinata HOM05D001035 ORTHO05D001045 1.3e-07 59.7 42 71.4
BcaC03g13803 Brassica carinata HOM05D001035 ORTHO05D001045 1.3e-07 59.7 42 71.4
C02p10440 Brassica napus HOM05D001035 ORTHO05D001045 1.3e-07 59.7 42 71.4
BolC2t07075H Brassica oleracea HOM05D001035 ORTHO05D001045 1.3e-07 59.7 42 71.4
BraA02t05596Z Brassica rapa HOM05D001035 ORTHO05D001045 1.3e-07 59.7 42 71.4
BraA03t10340Z Brassica rapa HOM05D001035 ORTHO05D001045 1.3e-07 59.7 42 71.4
Thhalv10012697m.g Eutrema salsugineum HOM05D001035 ORTHO05D001045 1.3e-07 59.7 42 71.4
Sp6g23690 Schrenkiella parvula HOM05D001035 ORTHO05D001045 1.3e-07 59.7 42 71.4
BcaB01g04766 Brassica carinata HOM05D001035 ORTHO05D001045 2.2e-07 58.9 42 71.4
BcaB07g30986 Brassica carinata HOM05D001035 ORTHO05D018646 2.2e-07 58.9 42 69.0
AL6G32350 Arabidopsis lyrata HOM05D001035 ORTHO05D001045 2.9e-07 58.5 42 69.0
CARHR192010 Cardamine hirsuta HOM05D001035 ORTHO05D001045 2.9e-07 58.5 42 69.0
Carub.0006s1913 Capsella rubella HOM05D001035 ORTHO05D001045 3.8e-07 58.2 42 66.7
BolC3t13652H Brassica oleracea HOM05D001035 ORTHO05D001045 4.9e-07 57.8 42 69.0
AT5G20840 Arabidopsis thaliana HOM05D001035 ORTHO05D001045 8.4e-07 57.0 42 66.7
A03p10290 Brassica napus HOM05D001035 ORTHO05D001045 8.4e-07 57.0 42 69.0
C03p11820 Brassica napus HOM05D001035 ORTHO05D001045 1.1e-06 56.6 42 66.7
Aa31LG4G12980 Aethionema arabicum HOM05D001035 ORTHO05D001045 1.4e-06 56.2 42 66.7
BcaB05g22808 Brassica carinata HOM05D001035 ORTHO05D018646 1.4e-06 56.2 30 83.3
THA.LOC104810980 Tarenaya hassleriana HOM05D001035 ORTHO05D001045 4.2e-06 54.7 42 64.3
AT3G43220 Arabidopsis thaliana HOM05D001035 ORTHO05D001045 7.1e-06 53.9 42 64.3
Carub.0005s0904 Capsella rubella HOM05D001035 ORTHO05D001045 7.1e-06 53.9 42 64.3


User provided reference genes

Program Settings