Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p05500 Brassica napus HOM05D008496 ORTHO05D010729 7.6e-144 513.8 265 100.0
BraA09t36189Z Brassica rapa HOM05D008496 ORTHO05D010729 2.5e-142 508.8 267 99.3
BcaC04g23649 Brassica carinata HOM05D008496 ORTHO05D010729 2.5e-131 472.2 270 93.0
C09p05980 Brassica napus HOM05D008496 ORTHO05D010729 7.4e-131 470.7 270 91.9
BolC9t53523H Brassica oleracea HOM05D008496 ORTHO05D010729 7.4e-131 470.7 270 91.9
BcaC04g23653 Brassica carinata HOM05D008496 ORTHO05D010729 1.3e-130 469.9 270 92.6
C09p06000 Brassica napus HOM05D008496 ORTHO05D010729 2.8e-130 468.8 270 92.2
BolC9t53525H Brassica oleracea HOM05D008496 ORTHO05D010729 2.8e-130 468.8 270 92.2
C09p05990 Brassica napus HOM05D008496 ORTHO05D010729 1.2e-117 426.8 285 80.0
BolC9t53524H Brassica oleracea HOM05D008496 ORTHO05D010729 5.7e-115 417.9 280 79.6
BcaC04g23651 Brassica carinata HOM05D008496 ORTHO05D010729 1.3e-114 416.8 280 79.3
A09p05490 Brassica napus HOM05D008496 ORTHO05D010729 4.1e-113 411.8 280 80.7
BraA09t36187Z Brassica rapa HOM05D008496 ORTHO05D010729 4.1e-113 411.8 280 81.1
BcaB04g19694 Brassica carinata HOM05D008496 ORTHO05D010729 1.5e-91 340.1 276 70.7
Sp2g21000 Schrenkiella parvula HOM05D008496 ORTHO05D010729 3.6e-61 239.2 287 52.3
BcaB04g19693 Brassica carinata HOM05D008496 ORTHO05D010729 4.0e-60 235.7 259 53.3
BraA02t08856Z Brassica rapa HOM05D008496 ORTHO05D010729 4.2e-57 225.7 289 52.6
A02p38800 Brassica napus HOM05D008496 ORTHO05D010729 2.1e-56 223.4 289 52.2
C02p58360 Brassica napus HOM05D008496 ORTHO05D010729 2.7e-56 223.0 289 52.2
BcaC03g17812 Brassica carinata HOM05D008496 ORTHO05D010729 1.0e-55 221.1 289 51.9
BolC2t11900H Brassica oleracea HOM05D008496 ORTHO05D010729 1.0e-55 221.1 289 51.9
BcaB07g34208 Brassica carinata HOM05D008496 ORTHO05D010729 4.3e-54 215.7 270 50.7
A06p37240 Brassica napus HOM05D008496 ORTHO05D010729 5.6e-54 215.3 306 49.3
BraA06t26648Z Brassica rapa HOM05D008496 ORTHO05D010729 5.6e-54 215.3 306 49.3
BcaC04g23648 Brassica carinata HOM05D008496 ORTHO05D010729 3.6e-53 212.6 282 49.3
C09p05960 Brassica napus HOM05D008496 ORTHO05D010729 3.6e-53 212.6 282 51.8
BolC9t53521H Brassica oleracea HOM05D008496 ORTHO05D010729 3.6e-53 212.6 282 51.8
C07p41230 Brassica napus HOM05D008496 ORTHO05D010729 2.4e-52 209.9 306 49.7
AT5G27880 Arabidopsis thaliana HOM05D008496 ORTHO05D010729 3.1e-52 209.5 284 50.7
BolC7t44648H Brassica oleracea HOM05D008496 ORTHO05D010729 4.0e-52 209.1 306 49.0
Thhalv10005521m.g Eutrema salsugineum HOM05D008496 ORTHO05D010729 6.9e-52 208.4 293 49.1
A09p05480 Brassica napus HOM05D008496 ORTHO05D010729 2.6e-51 206.5 285 51.2
BraA09t36186Z Brassica rapa HOM05D008496 ORTHO05D010729 4.4e-51 205.7 285 51.2
Carub.0006s2470 Capsella rubella HOM05D008496 ORTHO05D010729 1.0e-47 194.5 264 47.7
AL6G39050 Arabidopsis lyrata HOM05D008496 ORTHO05D010729 6.6e-47 191.8 278 48.6
BcaNung04743 Brassica carinata HOM05D008496 ORTHO05D010729 1.5e-46 190.7 250 50.0
CARHR186360 Cardamine hirsuta HOM05D008496 ORTHO05D010729 6.2e-45 185.3 288 45.1
CARHR183000 Cardamine hirsuta HOM05D008496 ORTHO05D010729 3.1e-44 183.0 289 46.7
CARHR266170 Cardamine hirsuta HOM05D008496 ORTHO05D010729 5.3e-44 182.2 271 46.1
BcaC03g17813 Brassica carinata HOM05D008496 ORTHO05D010729 6.7e-39 165.2 166 58.4
CARHR182960 Cardamine hirsuta HOM05D008496 ORTHO05D010729 1.1e-38 164.5 265 45.3
CARHR292220 Cardamine hirsuta HOM05D008496 ORTHO05D010729 4.6e-32 142.5 277 41.9
CARHR289360 Cardamine hirsuta HOM05D008496 ORTHO05D010729 5.1e-31 139.0 324 36.1
CARHR292330 Cardamine hirsuta HOM05D008496 ORTHO05D010729 6.3e-21 105.5 285 34.4
Aa31LG11G9630 Aethionema arabicum HOM05D008496 ORTHO05D010729 2.0e-19 100.5 231 35.1
THA.LOC104820093 Tarenaya hassleriana HOM05D008496 ORTHO05D010729 1.6e-08 64.3 302 26.8
CARHR182990 Cardamine hirsuta HOM05D008496 ORTHO05D010729 3.0e-07 60.1 76 46.1
CsaV3_5G023110 Cucumis sativus L. HOM05D004123 ORTHO05D004768 5.1e-07 59.3 190 31.6
THA.LOC104803109 Tarenaya hassleriana HOM05D008496 ORTHO05D010729 5.1e-07 59.3 294 26.5
C09p05970 Brassica napus HOM05D012099 ORTHO05D014504 1.1e-06 58.2 55 60.0
MELO3C003021.2 Cucumis melo HOM05D004123 ORTHO05D004768 1.1e-06 58.2 191 31.4
CARHR182980 Cardamine hirsuta HOM05D008496 ORTHO05D010729 3.3e-06 56.6 115 38.3


User provided reference genes

Program Settings