Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 2.8e-191 671.8 335 100.0
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 3.1e-190 668.3 335 99.1
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 2.5e-176 622.1 337 93.5
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 2.5e-176 622.1 337 93.5
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 4.7e-175 617.8 336 92.6
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.7e-162 575.5 341 83.3
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 6.9e-158 560.8 343 81.9
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.3e-153 545.8 344 79.9
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 4.8e-151 538.1 343 79.6
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 2.6e-149 532.3 343 77.8
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 3.4e-149 531.9 342 78.4
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 2.8e-143 512.3 339 75.8
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 2.5e-139 499.2 316 78.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 1.0e-129 467.2 343 70.0
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 8.5e-124 447.6 340 67.1
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 3.0e-121 439.1 340 65.9
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 2.2e-119 433.0 333 66.4
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 4.5e-117 425.2 342 62.9
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.0e-116 424.1 335 64.5
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 3.8e-116 422.2 342 62.6
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 5.0e-116 421.8 339 62.8
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 5.0e-116 421.8 335 64.2
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.1e-115 420.6 350 62.6
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.1e-115 420.6 339 62.5
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 4.2e-115 418.7 347 62.5
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.6e-114 416.8 339 61.4
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 4.7e-114 415.2 342 65.5
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.0e-113 414.1 336 64.0
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.4e-113 413.7 330 63.0
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.8e-113 413.3 335 62.1
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 2.3e-113 412.9 339 61.9
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 5.2e-113 411.8 336 63.4
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 8.8e-113 411.0 342 62.6
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.5e-112 410.2 341 60.1
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 5.7e-112 408.3 335 61.2
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.2e-111 406.4 339 61.7
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 3.7e-111 405.6 333 61.3
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 8.2e-111 404.4 343 61.5
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.1e-110 404.1 330 62.1
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 2.4e-110 402.9 334 61.7
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.4e-110 402.9 313 64.2
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 3.1e-110 402.5 362 59.4
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 3.1e-110 402.5 305 65.9
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 3.1e-110 402.5 334 61.7
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 5.3e-110 401.7 353 59.8
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 9.1e-110 401.0 337 60.5
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 3.5e-109 399.1 349 59.9
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 3.5e-109 399.1 359 58.8
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 7.7e-109 397.9 336 61.0
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.0e-108 397.5 352 58.0
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.3e-108 397.1 346 58.7
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.7e-108 396.7 329 60.8
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.7e-108 396.7 301 63.5
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.7e-108 396.7 337 61.7
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 2.9e-108 396.0 337 59.6
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.8e-108 395.6 340 60.0
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 8.5e-108 394.4 326 60.1
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 4.2e-107 392.1 335 60.0
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.5e-107 391.7 298 64.8
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 7.2e-107 391.3 330 59.7
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 9.4e-107 391.0 344 58.7
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.6e-106 390.2 312 61.9
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 2.1e-106 389.8 314 64.0
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 2.7e-106 389.4 327 62.1
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.6e-106 389.0 300 65.0
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 8.0e-106 387.9 304 66.4
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.8e-105 386.7 346 59.5
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 2.3e-105 386.3 345 58.8
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 4.0e-105 385.6 314 62.1
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.2e-104 384.0 323 60.7
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 8.3e-103 377.9 343 57.1
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 8.3e-103 377.9 353 58.1
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.4e-102 377.1 336 58.6
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.4e-102 376.3 315 60.0
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 2.4e-102 376.3 347 58.5
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.2e-101 374.0 338 58.0
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.0e-101 373.2 316 58.5
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.0e-101 373.2 347 58.5
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 2.7e-101 372.9 312 59.9
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 2.7e-101 372.9 313 59.7
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.5e-101 372.5 307 60.3
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 4.5e-101 372.1 317 61.8
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 2.9e-100 369.4 352 57.4
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.2e-99 365.5 290 66.2
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 4.2e-99 365.5 317 59.9
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 8.0e-98 361.3 302 61.3
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 8.3e-95 351.3 347 56.2
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.8e-94 350.1 272 62.9
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 1.2e-93 347.4 284 62.7
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 1.7e-92 343.6 218 74.8
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 8.6e-92 341.3 314 57.3
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 2.8e-90 336.3 308 54.5
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 4.4e-88 328.9 230 67.0
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.3e-87 327.4 273 59.3
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 6.4e-87 325.1 323 55.4
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.2e-85 320.9 248 61.7
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.5e-83 313.9 360 48.6
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 5.8e-80 302.0 277 57.0
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.4e-78 297.4 324 49.7
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.1e-74 283.5 240 62.9
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.4e-70 270.8 340 46.2
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 2.6e-64 250.0 215 60.5
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 8.4e-63 245.0 292 44.9
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.4e-62 244.2 360 38.9
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.9e-62 243.8 302 43.7
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.0e-60 236.5 286 43.7
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 2.4e-57 226.9 235 45.1
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 9.0e-57 224.9 228 56.1
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.0e-56 223.8 224 54.5
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.1e-53 213.8 211 54.0
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 7.3e-51 205.3 309 41.7
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 7.6e-48 195.3 140 73.6
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.6e-45 187.6 327 36.7
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 5.6e-43 179.1 195 46.2
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 9.0e-41 171.8 162 51.9
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 2.1e-29 134.0 106 55.7
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 9.7e-27 125.2 185 44.3
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.1e-25 120.2 155 49.7
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.1e-11 75.1 164 37.8
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 2.0e-11 74.3 37 86.5
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 8.2e-10 68.9 101 40.6


User provided reference genes

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