Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 1.9e-116 422.5 212 100.0
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 5.4e-116 421.0 212 99.5
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 5.1e-106 387.9 198 98.0
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 1.1e-100 370.2 212 89.2
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 4.3e-97 358.2 198 91.9
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 4.3e-97 358.2 198 91.9
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 1.5e-94 349.7 210 84.3
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 2.4e-92 342.4 210 83.3
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 1.7e-90 336.3 210 81.4
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 4.3e-89 331.6 211 81.0
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 7.3e-89 330.9 210 81.0
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 2.1e-88 329.3 210 80.5
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 6.2e-88 327.8 211 79.6
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 3.2e-76 288.9 200 75.5
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 7.1e-76 287.7 205 74.6
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 1.1e-65 253.8 143 87.4
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 1.5e-65 253.4 213 65.3
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 3.3e-65 252.3 199 66.3
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 2.1e-64 249.6 200 66.5
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 4.8e-64 248.4 263 57.0
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 1.1e-63 247.3 205 64.9
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 1.1e-63 247.3 219 61.6
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.4e-63 246.9 206 64.1
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 1.4e-63 246.9 199 64.8
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 4.1e-63 245.4 202 64.4
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 6.9e-63 244.6 213 63.4
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 1.2e-62 243.8 216 64.4
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 1.5e-62 243.4 205 63.4
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 1.3e-61 240.4 199 62.8
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 1.3e-61 240.4 202 63.4
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 2.2e-61 239.6 202 63.9
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 8.4e-61 237.7 202 63.9
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 1.1e-60 237.3 202 64.4
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 3.2e-60 235.7 213 61.0
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 4.2e-60 235.3 216 60.6
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 5.5e-60 235.0 205 62.0
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 7.2e-60 234.6 208 62.5
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 1.2e-59 233.8 207 60.9
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 1.2e-59 233.8 203 64.0
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 1.2e-59 233.8 203 61.6
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 1.6e-59 233.4 197 62.4
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 2.1e-59 233.0 205 61.0
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 4.6e-59 231.9 198 60.1
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 4.6e-59 231.9 205 60.5
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 2.3e-58 229.6 199 61.3
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 2.3e-58 229.6 200 63.0
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 2.3e-58 229.6 209 59.8
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 3.9e-58 228.8 200 62.0
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 6.7e-58 228.0 197 61.4
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 8.7e-58 227.6 227 54.2
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 1.5e-57 226.9 202 61.4
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 1.9e-57 226.5 203 59.6
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 5.7e-57 224.9 203 60.1
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 1.3e-56 223.8 195 58.5
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 1.6e-56 223.4 124 86.3
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 8.2e-56 221.1 199 60.8
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 2.4e-55 219.5 205 59.5
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 2.4e-55 219.5 198 58.1
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 4.1e-55 218.8 198 59.1
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 5.3e-55 218.4 196 62.2
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 5.3e-55 218.4 198 59.1
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 1.5e-54 216.9 203 55.7
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 1.5e-54 216.9 205 56.6
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 3.4e-54 215.7 221 54.3
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 4.5e-54 215.3 205 55.1
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 7.7e-54 214.5 193 59.1
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 2.9e-53 212.6 200 58.5
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 3.8e-53 212.2 201 58.2
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 2.5e-52 209.5 197 60.4
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.6e-51 206.8 218 54.1
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 2.7e-51 206.1 196 56.1
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 3.6e-51 205.7 198 53.5
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 1.4e-50 203.8 206 52.9
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 2.3e-50 203.0 212 54.7
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 6.7e-50 201.4 202 53.5
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 1.5e-49 200.3 209 55.5
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 2.5e-49 199.5 176 59.7
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 1.3e-48 197.2 195 56.4
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 2.2e-48 196.4 197 56.9
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 1.4e-47 193.7 184 58.2
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 6.9e-47 191.4 147 66.0
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 6.9e-47 191.4 143 70.6
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 1.2e-46 190.7 195 54.9
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 1.7e-45 186.8 177 55.9
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 2.2e-45 186.4 147 66.0
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 3.8e-45 185.7 204 52.9
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 8.5e-45 184.5 216 47.7
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 1.9e-44 183.3 104 82.7
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 2.5e-44 183.0 147 63.3
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 3.9e-42 175.6 203 51.7
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 1.1e-41 174.1 134 65.7
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 4.1e-39 165.6 149 57.0
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 4.1e-39 165.6 136 57.4
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 2.2e-37 159.8 159 51.6
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 8.5e-37 157.9 292 37.0
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 1.5e-33 147.1 267 37.1
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 1.7e-32 143.7 162 51.2
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 8.2e-32 141.4 127 61.4
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 1.8e-31 140.2 151 49.0
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 2.4e-31 139.8 149 50.3
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 5.0e-29 132.1 96 75.0
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 1.2e-27 127.5 115 61.7
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 5.4e-23 112.1 120 55.0
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 8.5e-21 104.8 200 37.5
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 2.6e-17 93.2 88 54.5
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 7.5e-17 91.7 89 57.3
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 2.8e-16 89.7 96 53.1
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 5.4e-15 85.5 74 62.2
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 2.7e-14 83.2 118 36.4
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 8.9e-10 68.2 90 45.6
Hund18476 Selenicereus undatus HOM05D007131 ORTHO05D009026 7.5e-09 65.1 130 34.6
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 1.3e-08 64.3 121 35.5


User provided reference genes

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