Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 1.3e-166 589.7 316 100.0
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 3.3e-162 575.1 316 98.4
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 6.5e-158 560.8 351 88.9
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 2.5e-157 558.9 318 95.6
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 6.1e-156 554.3 346 88.7
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 2.9e-150 535.4 319 90.6
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 2.7e-140 502.3 317 85.8
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 1.8e-136 489.6 317 85.5
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 7.0e-136 487.6 320 85.6
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 2.0e-127 459.5 318 78.6
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 2.5e-125 452.6 318 79.6
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 4.1e-120 435.3 320 76.6
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 2.7e-119 432.6 318 78.0
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 4.0e-115 418.7 319 76.5
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 1.2e-114 417.2 317 74.1
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 1.7e-113 413.3 357 69.5
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 7.3e-109 397.9 326 71.5
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 5.2e-99 365.2 293 71.7
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 6.0e-87 325.1 264 75.4
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 6.6e-86 321.6 307 62.9
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 9.9e-82 307.8 316 59.8
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 4.6e-79 298.9 320 59.4
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 6.9e-75 285.0 325 56.3
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 9.0e-75 284.6 326 54.3
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 1.2e-74 284.3 328 57.3
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 2.0e-74 283.5 311 57.2
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 7.6e-74 281.6 322 55.3
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 2.2e-73 280.0 327 54.7
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.8e-73 279.3 321 55.1
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 4.9e-73 278.9 315 55.9
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 8.4e-73 278.1 303 56.1
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 8.4e-73 278.1 303 56.1
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 1.4e-72 277.3 315 56.2
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.2e-71 274.2 304 55.3
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.7e-71 273.1 296 58.8
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.6e-71 272.3 305 56.1
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.0e-70 271.2 305 55.7
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 6.7e-70 268.5 338 52.7
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.3e-69 266.2 299 54.5
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 4.3e-69 265.8 318 51.9
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 4.3e-69 265.8 307 55.4
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 5.6e-69 265.4 312 52.9
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 4.8e-68 262.3 340 51.2
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 6.2e-68 261.9 315 54.6
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 6.2e-68 261.9 319 53.3
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.8e-67 260.4 347 49.6
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.4e-67 260.0 301 56.5
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 3.1e-67 259.6 332 50.0
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 6.9e-67 258.5 311 53.7
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 9.0e-67 258.1 331 49.5
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 1.5e-66 257.3 332 53.6
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.5e-66 257.3 315 54.0
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 1.5e-66 257.3 312 51.9
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 3.4e-66 256.1 315 53.3
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 3.4e-66 256.1 306 52.6
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 3.4e-66 256.1 306 52.6
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 4.5e-66 255.8 321 52.3
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 1.3e-65 254.2 328 50.9
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 4.9e-65 252.3 334 49.1
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 8.4e-65 251.5 319 52.0
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.4e-64 250.8 316 50.9
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 2.5e-64 250.0 344 49.1
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 1.2e-63 247.7 310 51.3
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 2.1e-63 246.9 336 50.0
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 1.0e-62 244.6 329 50.5
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 1.3e-62 244.2 281 55.2
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 3.0e-62 243.0 322 49.4
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 8.7e-62 241.5 285 53.0
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.1e-61 241.1 315 51.1
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 1.5e-61 240.7 330 49.1
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 1.9e-61 240.4 375 46.7
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 7.4e-61 238.4 267 53.9
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 4.8e-60 235.7 216 64.4
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 6.2e-60 235.3 322 49.7
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 6.2e-60 235.3 321 49.5
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.4e-59 234.2 301 50.8
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 3.4e-58 229.6 336 47.6
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 5.8e-58 228.8 348 45.7
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 7.6e-58 228.4 279 53.4
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 2.9e-57 226.5 312 50.0
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 5.0e-57 225.7 318 50.0
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 3.2e-56 223.0 331 45.6
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 5.5e-56 222.2 318 49.1
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 7.1e-56 221.9 327 46.5
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 9.3e-56 221.5 271 52.0
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.6e-55 220.7 282 51.1
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 1.6e-55 220.7 321 47.7
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 2.1e-55 220.3 309 49.8
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 2.1e-55 220.3 315 49.8
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 1.0e-54 218.0 331 48.0
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 2.3e-54 216.9 303 47.5
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 3.9e-54 216.1 261 52.5
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 5.1e-54 215.7 169 68.6
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 5.1e-54 215.7 318 47.8
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.5e-53 213.4 318 47.2
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 3.3e-53 213.0 318 48.4
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 7.4e-53 211.8 307 46.9
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 2.8e-52 209.9 321 49.5
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 6.3e-52 208.8 325 48.3
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.2e-50 204.5 312 45.5
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 3.4e-50 203.0 302 47.7
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 8.5e-49 198.4 326 45.1
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 8.5e-49 198.4 286 49.7
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.1e-48 198.0 295 48.8
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.4e-48 197.6 326 45.1
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.9e-48 197.2 292 46.2
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 4.6e-47 192.6 341 43.1
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 7.9e-47 191.8 359 40.9
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 7.4e-45 185.3 215 56.7
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 1.7e-44 184.1 261 49.4
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 2.2e-44 183.7 491 34.6
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 8.2e-44 181.8 276 47.1
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 3.4e-42 176.4 245 49.0
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 5.9e-42 175.6 187 56.1
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 2.9e-41 173.3 287 42.9
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 3.8e-41 172.9 307 45.3
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 5.7e-37 159.1 301 42.5
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 6.3e-36 155.6 322 39.8
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 1.4e-35 154.5 218 49.1
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 9.1e-35 151.8 315 41.9
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.9e-32 144.1 109 70.6
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 4.0e-30 136.3 109 67.9
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 5.7e-29 132.5 123 60.2
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.0e-26 124.0 194 43.3
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 1.6e-23 114.4 284 38.4
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 3.0e-22 110.2 110 59.1
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 8.8e-22 108.6 226 38.9
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 5.7e-21 105.9 102 57.8
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 2.4e-19 100.5 242 36.0
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.0e-17 95.1 210 37.1
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 2.2e-17 94.0 79 64.6
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 6.5e-17 92.4 174 43.1
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 1.2e-15 88.2 210 33.8
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 4.7e-15 86.3 220 31.8
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 4.7e-15 86.3 220 31.8
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 5.7e-13 79.3 70 61.4
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 9.8e-13 78.6 86 53.5
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 2.3e-09 67.4 66 57.6
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 3.3e-08 63.5 208 35.1
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 1.4e-06 58.2 317 30.0


User provided reference genes

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