Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 2.9e-169 599.4 552 100.0
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 2.4e-152 543.1 556 90.8
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 3.2e-144 516.2 562 90.0
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 3.2e-144 516.2 562 90.0
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 2.7e-127 459.9 552 76.6
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 8.8e-118 428.3 569 71.7
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 4.7e-87 326.2 609 57.6
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 2.6e-85 320.5 593 61.0
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 1.5e-77 294.7 699 49.6
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-75 288.5 733 46.9
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.9e-75 287.7 542 58.1
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 2.3e-70 270.8 731 50.2
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 4.0e-70 270.0 567 59.1
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 3.3e-64 250.4 187 69.5
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 7.6e-61 239.2 501 56.3
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 4.9e-60 236.5 200 64.0
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 6.4e-60 236.1 200 63.5
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.9e-59 234.6 505 50.5
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 2.3e-57 227.6 506 57.9
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 1.4e-54 218.4 506 54.5
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 2.4e-51 207.6 500 50.4
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 2.9e-44 184.1 517 56.5
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 2.9e-44 184.1 680 36.9
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 6.0e-42 176.4 506 47.0
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 1.8e-41 174.9 584 50.9
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 7.4e-40 169.5 511 50.7
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 9.0e-38 162.5 550 41.3
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 6.4e-36 156.4 202 46.0
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 1.6e-34 151.8 524 46.4
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 3.5e-34 150.6 536 41.8
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 5.3e-30 136.7 537 50.1
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 3.4e-29 134.0 528 49.6
AL5G18530 Arabidopsis lyrata HOM05D008352 ORTHO05D011250 1.4e-27 128.6 145 53.1
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 1.4e-27 128.6 201 39.8
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 9.3e-27 125.9 201 41.8
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 3.0e-25 120.9 181 43.6
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 5.1e-25 120.2 181 41.4
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 8.7e-25 119.4 151 49.0
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 1.9e-24 118.2 201 37.8
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.9e-24 118.2 182 39.0
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 2.5e-24 117.9 151 46.4
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 5.7e-24 116.7 111 56.8
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 7.4e-24 116.3 111 57.7
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 2.8e-23 114.4 151 48.3
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 2.8e-23 114.4 152 47.4
Aa31LG2G4400 Aethionema arabicum HOM05D008352 ORTHO05D011361 6.3e-23 113.2 150 48.7
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 8.2e-23 112.8 190 38.4
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 8.2e-23 112.8 190 38.4
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.1e-22 112.5 186 39.8
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 1.4e-22 112.1 190 38.4
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 1.4e-22 112.1 190 38.4
Sp1g26250 Schrenkiella parvula HOM05D008352 ORTHO05D011361 1.8e-22 111.7 149 46.3
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 5.3e-22 110.2 191 40.3
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 6.9e-22 109.8 149 47.7
AT3G28820 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 1.5e-21 108.6 151 47.0
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 1.5e-21 108.6 154 46.1
AT3G28810 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 5.9e-21 106.7 151 46.4
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 7.6e-21 106.3 190 37.9
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.0e-20 105.9 201 37.8
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 1.0e-20 105.9 190 37.4
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 1.0e-20 105.9 190 37.4
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 1.7e-20 105.1 190 35.8
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 1.7e-20 105.1 182 37.4
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 2.9e-20 104.4 187 35.8
AL5G18840 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 3.8e-20 104.0 147 46.9
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 3.8e-20 104.0 192 37.5
A09p36020 Brassica napus HOM05D008352 ORTHO05D011361 5.0e-20 103.6 152 44.1
C07p38160 Brassica napus HOM05D008352 ORTHO05D011361 6.5e-20 103.2 149 45.0
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 1.1e-19 102.4 199 36.2
BraA09t39127Z Brassica rapa HOM05D008352 ORTHO05D011361 1.1e-19 102.4 152 43.4
BcaB07g32652 Brassica carinata HOM05D008352 ORTHO05D011361 1.4e-19 102.1 152 41.4
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 1.4e-19 102.1 199 35.7
BolC7t44338H Brassica oleracea HOM05D008352 ORTHO05D011361 1.9e-19 101.7 146 45.2
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 3.2e-19 100.9 181 36.5
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 3.2e-19 100.9 181 36.5
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 3.2e-19 100.9 182 37.4
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 4.2e-19 100.5 152 44.1
BcaC01g00190 Brassica carinata HOM05D008352 ORTHO05D011361 5.5e-19 100.1 147 42.2
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 5.5e-19 100.1 197 34.5
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 5.5e-19 100.1 181 36.5
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 5.5e-19 100.1 196 35.2
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 5.5e-19 100.1 196 35.2
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 5.5e-19 100.1 181 36.5
BcaB07g32675 Brassica carinata HOM05D008352 ORTHO05D011361 7.2e-19 99.8 152 43.4
C05p29370 Brassica napus HOM05D008352 ORTHO05D011361 7.2e-19 99.8 152 43.4
BolC5t31669H Brassica oleracea HOM05D008352 ORTHO05D011361 7.2e-19 99.8 152 43.4
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 7.2e-19 99.8 197 34.5
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 9.3e-19 99.4 193 37.8
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.2e-18 99.0 192 35.9
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 2.1e-18 98.2 184 34.8
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 2.1e-18 98.2 191 35.1
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.7e-18 97.8 185 35.7
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.7e-18 97.8 185 35.7
A06p40010 Brassica napus HOM05D008352 ORTHO05D011361 4.6e-18 97.1 146 43.8
A08p24470 Brassica napus HOM05D008352 ORTHO05D011361 4.6e-18 97.1 152 42.1
BraA06t26916Z Brassica rapa HOM05D008352 ORTHO05D011361 4.6e-18 97.1 146 43.8
BraA08t34403Z Brassica rapa HOM05D008352 ORTHO05D011361 4.6e-18 97.1 152 42.1
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 7.9e-18 96.3 168 35.7
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 1.3e-17 95.5 193 37.8
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.8e-17 95.1 183 35.0
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 5.1e-17 93.6 183 37.2
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.5e-16 92.0 121 40.5
C03p76750 Brassica napus HOM05D008352 ORTHO05D011361 1.5e-16 92.0 163 39.3
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 1.9e-16 91.7 183 36.6
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 1.9e-16 91.7 183 36.6
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 1.9e-16 91.7 168 38.7
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 1.9e-16 91.7 201 36.8
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 1.9e-16 91.7 168 38.7
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 2.5e-16 91.3 183 36.6
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 4.3e-16 90.5 176 35.2
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 5.7e-16 90.1 199 33.7
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 7.4e-16 89.7 200 37.0
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 2.4e-14 84.7 172 34.9
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 3.4e-13 80.9 171 35.1
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 4.5e-13 80.5 183 30.1
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 2.1e-10 71.6 151 36.4
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 6.1e-10 70.1 156 34.0
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 7.9e-10 69.7 108 42.6
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 3.9e-09 67.4 146 36.3
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 8.8e-09 66.2 157 32.5
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 8.8e-09 66.2 179 29.6
BcaNung06844 Brassica carinata HOM05D008352 ORTHO05D011361 8.8e-09 66.2 108 39.8
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 1.5e-08 65.5 165 35.2
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 1.5e-08 65.5 167 32.3
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 1.5e-08 65.5 165 35.2
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 1.5e-08 65.5 165 35.2
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 2.0e-08 65.1 116 35.3
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 2.6e-08 64.7 165 35.2
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 2.6e-08 64.7 165 35.2
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 2.6e-08 64.7 157 31.8
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 3.3e-08 64.3 158 33.5
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 5.7e-08 63.5 149 34.9
BcaC06g30893 Brassica carinata HOM05D007461 ORTHO05D010345 7.4e-08 63.2 141 31.9
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 9.7e-08 62.8 151 33.8
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 1.3e-07 62.4 151 33.8
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 1.3e-07 62.4 151 33.8
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.3e-07 62.4 157 33.1
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.3e-07 62.4 157 33.1
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.3e-07 62.4 157 33.1
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 3.7e-07 60.8 140 31.4
BcaB07g30118 Brassica carinata HOM05D011893 ORTHO05D013967 2.4e-06 58.2 151 32.5
AT5G48575 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 3.1e-06 57.8 98 43.9


User provided reference genes

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