Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 3.2e-90 335.1 176 100.0
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 2.3e-88 328.9 176 97.7
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 3.2e-74 282.0 176 85.2
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.2e-71 273.5 177 83.6
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.2e-71 273.5 177 83.6
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 6.3e-62 241.1 183 76.5
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 5.0e-59 231.5 182 70.9
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 3.2e-53 212.2 176 65.9
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 3.2e-53 212.2 176 65.9
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 3.5e-52 208.8 179 66.5
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.3e-51 206.8 178 66.3
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 3.0e-51 205.7 187 62.6
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 1.5e-50 203.4 179 64.8
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.9e-50 203.0 179 64.8
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 3.6e-49 198.7 188 59.6
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 8.0e-49 197.6 187 58.8
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.7e-46 189.9 186 61.3
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.1e-45 187.2 191 55.5
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 4.6e-44 181.8 178 56.2
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.4e-40 170.2 181 52.5
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.6e-36 156.8 171 52.0
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.4e-32 143.7 177 47.5
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 4.4e-31 138.7 173 47.4
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.4e-31 138.7 176 47.7
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 7.6e-31 137.9 183 46.4
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 9.9e-31 137.5 175 47.4
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 6.4e-30 134.8 179 40.8
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 8.4e-30 134.4 183 42.1
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 8.4e-30 134.4 175 47.4
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.4e-29 133.7 175 49.1
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 1.9e-29 133.3 175 45.7
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.9e-29 133.3 178 43.8
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 2.4e-29 132.9 178 45.5
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.6e-28 130.2 178 46.6
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 2.1e-28 129.8 180 43.3
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 3.5e-28 129.0 180 45.6
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 1.9e-26 123.2 181 40.9
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 4.3e-26 122.1 182 42.9
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 5.6e-26 121.7 187 42.2
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 9.6e-26 120.9 175 46.9
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 1.2e-25 120.6 182 38.5
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 1.2e-25 120.6 169 45.6
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.2e-25 120.6 169 45.0
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 3.6e-25 119.0 183 43.2
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.6e-25 119.0 178 42.1
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 4.7e-25 118.6 175 43.4
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 4.7e-25 118.6 185 40.0
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 6.2e-25 118.2 178 43.8
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 6.2e-25 118.2 175 42.9
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.4e-24 117.1 185 42.2
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 1.4e-24 117.1 175 45.1
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 1.8e-24 116.7 174 44.3
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.8e-24 116.7 180 42.8
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 5.2e-24 115.2 177 40.1
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 6.9e-24 114.8 182 37.9
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 9.0e-24 114.4 175 41.1
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.2e-23 114.0 180 42.8
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 1.5e-23 113.6 187 42.2
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 1.5e-23 113.6 173 43.4
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 3.4e-23 112.5 135 51.1
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 9.9e-23 110.9 180 42.2
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.3e-22 110.5 173 42.2
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.3e-22 110.5 178 41.0
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.7e-22 110.2 178 41.0
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 2.9e-22 109.4 185 40.0
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 4.9e-22 108.6 183 38.3
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 4.9e-22 108.6 177 43.5
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 8.4e-22 107.8 176 43.8
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 8.4e-22 107.8 180 43.3
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.4e-21 107.1 184 38.6
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.4e-21 107.1 177 42.9
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 2.4e-21 106.3 174 39.7
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.4e-21 106.3 175 39.4
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 4.2e-21 105.5 183 35.0
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 4.2e-21 105.5 179 35.8
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 4.2e-21 105.5 174 44.3
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 4.2e-21 105.5 174 38.5
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 5.4e-21 105.1 170 40.6
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 5.4e-21 105.1 176 35.8
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 7.1e-21 104.8 182 40.7
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 9.3e-21 104.4 177 39.5
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 1.2e-20 104.0 172 39.0
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.6e-20 103.6 181 40.3
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.6e-20 103.6 173 39.3
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.1e-20 103.2 183 39.3
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 3.5e-20 102.4 183 39.3
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 3.5e-20 102.4 174 37.9
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 3.5e-20 102.4 171 38.6
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 6.0e-20 101.7 183 39.3
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 6.0e-20 101.7 184 39.1
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 1.3e-19 100.5 174 36.8
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 2.3e-19 99.8 159 40.3
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 3.0e-19 99.4 179 39.1
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 1.1e-18 97.4 174 35.6
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 2.5e-18 96.3 181 38.1
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 4.3e-18 95.5 180 36.7
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 7.3e-18 94.7 186 32.3
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 6.2e-17 91.7 181 37.0
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 8.1e-17 91.3 176 38.1
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 3.1e-16 89.4 177 37.3
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 4.0e-16 89.0 171 35.1
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 4.0e-16 89.0 171 32.7
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 4.0e-16 89.0 212 35.4
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 1.2e-15 87.4 205 34.6
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 2.6e-15 86.3 181 37.6
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 5.8e-15 85.1 168 35.1
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 7.1e-13 78.2 178 30.9
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 7.1e-13 78.2 182 34.6
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 3.5e-12 75.9 175 30.9
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 4.6e-12 75.5 179 31.8
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 7.9e-12 74.7 179 33.5
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.0e-11 74.3 167 30.5
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.3e-11 73.2 170 33.5
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 3.9e-11 72.4 179 33.5
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 6.7e-11 71.6 225 31.6
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 1.1e-10 70.9 182 31.3
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.1e-10 70.9 178 32.6
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 1.5e-10 70.5 180 32.8
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 4.3e-10 68.9 160 33.1
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.2e-07 60.8 108 34.3
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.3e-06 57.4 54 55.6


User provided reference genes

Program Settings