Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 3.0e-105 385.6 251 100.0
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 5.6e-104 381.3 251 98.0
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 5.6e-104 381.3 251 98.0
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 8.7e-73 277.7 257 84.4
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 7.4e-72 274.6 257 84.0
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 1.3e-68 263.8 263 80.6
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 4.3e-56 222.2 264 55.7
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 2.6e-48 196.4 264 55.7
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 2.2e-47 193.4 249 65.9
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 2.8e-47 193.0 265 56.6
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 3.7e-47 192.6 261 55.9
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.3e-44 184.1 261 57.9
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 6.3e-39 165.2 273 45.1
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 1.2e-34 151.0 279 48.0
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 2.6e-32 143.3 247 42.1
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 3.4e-32 142.9 251 47.8
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 1.1e-30 137.9 266 47.7
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 1.6e-29 134.0 269 43.9
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 2.0e-29 133.7 269 43.5
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 4.5e-29 132.5 269 43.9
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 4.2e-27 125.9 282 45.7
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 7.2e-27 125.2 257 40.5
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 1.2e-26 124.4 252 39.7
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 2.1e-26 123.6 276 48.6
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 2.1e-26 123.6 280 41.4
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 2.7e-26 123.2 244 40.2
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 3.6e-26 122.9 251 47.0
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 3.6e-26 122.9 252 35.7
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 4.7e-26 122.5 278 39.6
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 1.0e-25 121.3 232 42.2
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 1.4e-25 120.9 297 44.8
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 2.3e-25 120.2 275 49.8
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 3.0e-25 119.8 292 44.2
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 4.0e-25 119.4 256 48.0
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 2.0e-24 117.1 256 40.6
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 2.6e-24 116.7 236 39.0
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 3.4e-24 116.3 269 43.1
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 3.4e-24 116.3 275 40.7
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 5.7e-24 115.5 270 38.1
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 9.8e-24 114.8 250 34.0
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 1.3e-23 114.4 251 43.4
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 1.3e-23 114.4 281 44.1
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 2.8e-23 113.2 258 39.5
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 6.3e-23 112.1 286 40.2
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 6.3e-23 112.1 282 38.3
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 6.3e-23 112.1 143 43.4
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 1.1e-22 111.3 270 38.1
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 1.4e-22 110.9 275 45.8
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 1.4e-22 110.9 273 41.0
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 1.4e-22 110.9 290 35.2
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 3.1e-22 109.8 126 46.0
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 5.4e-22 109.0 105 50.5
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 5.4e-22 109.0 283 40.6
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 7.0e-22 108.6 302 31.8
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 9.2e-22 108.2 267 41.2
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 1.2e-21 107.8 88 55.7
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.6e-21 107.5 94 54.3
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 2.0e-21 107.1 281 40.2
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 5.9e-21 105.5 272 32.0
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 7.7e-21 105.1 75 64.0
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 7.7e-21 105.1 260 49.6
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.0e-20 104.8 299 30.8
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 1.3e-20 104.4 254 34.6
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 1.3e-20 104.4 269 48.0
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 2.3e-20 103.6 275 33.1
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.9e-20 103.2 131 43.5
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 2.9e-20 103.2 239 43.9
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 3.8e-20 102.8 326 27.9
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 6.6e-20 102.1 149 40.9
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 1.1e-19 101.3 245 41.6
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 3.3e-19 99.8 298 40.6
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.3e-19 99.4 118 44.9
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.2e-18 97.8 269 42.8
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.2e-18 97.8 275 42.2
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.1e-18 97.1 277 46.6
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 2.8e-18 96.7 286 36.4
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 4.7e-18 95.9 94 48.9
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 6.1e-18 95.5 252 48.4
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 6.1e-18 95.5 277 47.3
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 8.0e-18 95.1 148 37.2
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 4.0e-17 92.8 241 43.6
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 7.5e-16 88.6 267 37.8
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 2.2e-15 87.0 286 35.3
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 2.9e-15 86.7 266 42.1
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 8.3e-15 85.1 244 34.8
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 1.4e-14 84.3 262 29.8
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 2.4e-14 83.6 289 34.3
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 1.2e-13 81.3 58 62.1
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 3.5e-13 79.7 280 29.6
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 3.5e-13 79.7 244 36.1
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 4.6e-13 79.3 115 44.3
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 5.9e-13 79.0 300 34.0
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 7.8e-13 78.6 302 26.5
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 1.7e-12 77.4 301 31.2
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.0e-12 76.6 334 35.3
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 3.9e-12 76.3 129 41.1
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 5.0e-12 75.9 84 41.7
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.9e-11 73.9 253 28.1
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 1.9e-11 73.9 249 28.5
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 7.3e-11 72.0 235 30.6
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 2.1e-10 70.5 93 38.7
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 2.8e-10 70.1 62 50.0
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 4.7e-10 69.3 311 24.1
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 6.2e-10 68.9 264 33.3
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 1.0e-09 68.2 125 37.6
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 2.0e-08 63.9 83 39.8
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 8.3e-07 58.5 190 34.2


User provided reference genes

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