Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p00540 Brassica napus HOM05D008803 ORTHO05D019738 3.3e-39 164.5 77 100.0
C09p00320 Brassica napus HOM05D008803 ORTHO05D019738 3.3e-39 164.5 77 100.0
BolC9t52967H Brassica oleracea HOM05D008803 ORTHO05D019738 3.3e-39 164.5 77 100.0
BraA09t35706Z Brassica rapa HOM05D008803 ORTHO05D019738 3.3e-39 164.5 77 100.0
AL6G53080 Arabidopsis lyrata HOM05D008803 ORTHO05D019738 3.7e-30 134.4 75 78.7
Carub.0006s3687 Capsella rubella HOM05D008803 ORTHO05D019738 2.4e-29 131.7 79 77.2
CARHR248460 Cardamine hirsuta HOM05D008803 ORTHO05D019738 9.3e-26 119.8 77 72.7
CARHR274220 Cardamine hirsuta HOM05D008803 ORTHO05D011315 5.1e-16 87.4 76 56.6
A07p06560 Brassica napus HOM05D008803 ORTHO05D011315 1.3e-14 82.8 75 53.3
A07p06570 Brassica napus HOM05D008803 ORTHO05D011315 1.3e-14 82.8 75 53.3
C07p09970 Brassica napus HOM05D008803 ORTHO05D011315 1.6e-14 82.4 75 53.3
BcaC06g35895 Brassica carinata HOM05D008803 ORTHO05D011315 2.2e-14 82.0 75 53.3
BolC7t41442H Brassica oleracea HOM05D008803 ORTHO05D011315 2.2e-14 82.0 75 53.3
AT5G23212 Arabidopsis thaliana HOM05D008803 ORTHO05D011315 8.2e-14 80.1 77 57.1
C07p09960 Brassica napus HOM05D008803 ORTHO05D011315 8.2e-14 80.1 75 52.0
BraA07t28450Z Brassica rapa HOM05D008803 ORTHO05D011315 1.1e-13 79.7 75 50.7
A07p06550 Brassica napus HOM05D008803 ORTHO05D011315 4.1e-13 77.8 75 49.3
Thhalv10002959m.g Eutrema salsugineum HOM05D008803 ORTHO05D011315 4.1e-13 77.8 76 55.3
AL8G26140 Arabidopsis lyrata HOM05D008803 ORTHO05D011315 6.9e-13 77.0 76 55.3
BcaB06g26822 Brassica carinata HOM05D008803 ORTHO05D011315 2.0e-12 75.5 77 58.4
CARHR190320 Cardamine hirsuta HOM05D008803 ORTHO05D011315 4.5e-12 74.3 77 50.6
AT5G51845 Arabidopsis thaliana HOM05D008803 ORTHO05D011315 1.0e-11 73.2 76 53.9
Thhalv10002768m.g Eutrema salsugineum HOM05D008803 ORTHO05D011315 1.3e-11 72.8 76 53.9
BcaB06g25858 Brassica carinata HOM05D008803 ORTHO05D011315 1.7e-11 72.4 77 54.5
Thhalv10003010m.g Eutrema salsugineum HOM05D008803 ORTHO05D011315 2.2e-11 72.0 76 53.9
CARHR264730 Cardamine hirsuta HOM05D008803 ORTHO05D011315 2.9e-11 71.6 77 49.4
BcaB06g25857 Brassica carinata HOM05D008803 ORTHO05D011315 3.8e-11 71.2 77 53.2
Thhalv10003076m.g Eutrema salsugineum HOM05D008803 ORTHO05D011315 1.9e-10 68.9 75 46.7
BcaB01g04123 Brassica carinata HOM05D008803 ORTHO05D011315 3.2e-10 68.2 77 49.4
Carub.0008s1187 Capsella rubella HOM05D008803 ORTHO05D011315 4.2e-10 67.8 76 48.7
A03p16870 Brassica napus HOM05D008803 ORTHO05D011315 5.5e-10 67.4 77 46.8
BraA03t10975Z Brassica rapa HOM05D008803 ORTHO05D011315 5.5e-10 67.4 77 46.8
Carub.0008s1188 Capsella rubella HOM05D008803 ORTHO05D011315 2.1e-09 65.5 76 50.0
BraA03t10972Z Brassica rapa HOM05D008803 ORTHO05D011315 1.4e-08 62.8 77 45.5
A03p16850 Brassica napus HOM05D008803 ORTHO05D011315 1.8e-08 62.4 77 45.5
C03p19850 Brassica napus HOM05D008803 ORTHO05D011315 3.0e-08 61.6 81 44.4
BolC3t14363H Brassica oleracea HOM05D008803 ORTHO05D011315 3.0e-08 61.6 81 44.4
C03p19830 Brassica napus HOM05D008803 ORTHO05D011315 6.7e-08 60.5 77 46.8
BolC3t14360H Brassica oleracea HOM05D008803 ORTHO05D011315 6.7e-08 60.5 77 46.8
BcaC06g35893 Brassica carinata HOM05D008803 ORTHO05D011315 4.4e-07 57.8 49 49.0
Sp1g40760 Schrenkiella parvula HOM05D008968 ORTHO05D012182 2.2e-06 55.5 82 39.0


User provided reference genes

Program Settings