Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 2.5e-284 981.5 507 100.0
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 4.4e-233 811.2 464 92.2
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 5.3e-210 734.6 446 87.7
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 4.2e-207 724.9 452 86.5
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 3.3e-204 715.3 472 83.1
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 2.1e-190 669.5 464 79.5
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 1.5e-180 636.7 488 75.0
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 2.0e-169 599.7 486 71.0
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 7.2e-167 591.3 484 69.0
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 3.6e-166 589.0 488 69.5
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 1.6e-118 430.6 389 66.8
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 3.2e-114 416.4 487 53.2
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 2.0e-108 397.1 455 54.5
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 1.4e-90 337.8 217 80.2
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 2.8e-46 190.7 473 34.9
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.7e-44 184.1 516 32.0
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 3.8e-43 180.3 521 31.7
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 1.2e-41 175.3 527 30.9
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 2.0e-39 167.9 522 30.1
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.7e-38 164.9 516 29.8
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 7.7e-36 156.0 506 29.2
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.7e-35 154.8 491 30.1
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 3.8e-35 153.7 349 33.0
BcaB06g26239 Brassica carinata HOM05D007164 ORTHO05D008802 1.9e-34 151.4 110 71.8
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 9.4e-34 149.1 468 30.6
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.6e-33 148.3 360 32.5
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.6e-33 148.3 564 28.4
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 2.1e-33 147.9 229 37.6
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 2.3e-32 144.4 485 29.5
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 8.8e-32 142.5 493 29.8
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 1.2e-31 142.1 500 30.2
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 5.7e-31 139.8 515 26.8
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 2.2e-30 137.9 525 29.9
BcaB06g26240 Brassica carinata HOM05D007164 ORTHO05D008802 1.4e-29 135.2 161 52.2
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 7.0e-29 132.9 454 29.5
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 7.0e-29 132.9 484 27.9
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 1.2e-28 132.1 376 33.0
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 2.7e-28 131.0 417 28.8
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.0e-27 129.0 493 28.4
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 2.3e-27 127.9 582 27.0
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 2.9e-27 127.5 561 28.3
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 5.0e-27 126.7 343 31.2
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 1.1e-26 125.6 532 26.5
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 7.3e-26 122.9 234 35.9
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.6e-25 121.7 479 28.4
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 2.8e-25 120.9 523 28.9
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 3.6e-25 120.6 222 36.9
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 3.6e-25 120.6 492 27.0
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 1.8e-24 118.2 375 27.5
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 8.9e-24 115.9 472 28.4
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 1.5e-23 115.2 502 28.9
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 3.4e-23 114.0 486 28.2
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 5.7e-23 113.2 367 28.6
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 9.8e-23 112.5 320 30.0
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 9.8e-23 112.5 262 33.6
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 9.8e-23 112.5 518 27.8
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 1.7e-22 111.7 334 29.9
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.9e-22 110.9 513 26.7
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 8.3e-22 109.4 484 27.7
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 9.2e-21 105.9 326 30.1
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 9.2e-21 105.9 344 29.7
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 9.2e-21 105.9 213 33.8
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 1.2e-20 105.5 360 29.7
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 1.2e-20 105.5 359 30.1
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 1.6e-20 105.1 221 34.8
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 7.8e-20 102.8 529 26.7
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.7e-19 101.7 196 31.6
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 3.0e-19 100.9 202 31.2
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 1.1e-18 99.0 296 32.4
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 2.5e-18 97.8 167 35.9
Carub.0033s0003 Capsella rubella HOM05D003036 ORTHO05D008712 1.6e-17 95.1 83 68.7
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 3.6e-17 94.0 474 24.1
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 1.0e-16 92.4 445 28.5
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.0e-16 92.4 131 34.4
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 4.0e-16 90.5 168 33.9
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 1.3e-14 85.5 92 42.4
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 1.3e-14 85.5 459 25.7
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 1.3e-14 85.5 325 28.0
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.7e-14 85.1 320 28.4
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 2.9e-14 84.3 235 29.8
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 4.9e-14 83.6 255 31.4
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 1.1e-13 82.4 358 25.7
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 2.4e-13 81.3 265 30.6
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 3.2e-13 80.9 358 28.2
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 1.2e-12 79.0 200 30.5
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 7.8e-12 76.3 168 29.2
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 7.8e-12 76.3 120 32.5
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 3.9e-11 73.9 129 31.0
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 3.6e-09 67.4 340 27.6
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 3.6e-09 67.4 108 31.5
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 4.0e-08 63.9 450 25.3
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 8.9e-08 62.8 305 25.6
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 1.2e-07 62.4 315 26.3
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 9.8e-07 59.3 105 38.1
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 2.2e-06 58.2 195 23.6
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 2.2e-06 58.2 486 24.7


User provided reference genes

Program Settings