Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 8.7e-88 327.0 174 100.0
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 6.4e-83 310.8 175 96.6
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 6.4e-83 310.8 175 96.6
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 2.7e-81 305.4 176 96.0
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 2.5e-79 298.9 174 94.3
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 1.2e-76 290.0 175 90.9
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 2.1e-73 279.3 178 88.8
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 2.1e-73 279.3 178 88.8
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 3.0e-72 275.4 178 87.1
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 5.7e-71 271.2 178 86.5
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 7.4e-71 270.8 178 87.1
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 9.7e-71 270.4 178 87.6
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 4.5e-68 261.5 178 84.3
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 7.6e-68 260.8 179 83.8
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.3e-67 260.0 178 85.4
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.0e-64 250.4 178 83.1
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.9e-63 246.1 178 80.3
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 4.1e-53 211.8 177 70.1
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.4e-48 196.8 159 69.2
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 6.7e-48 194.5 139 75.5
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.5e-47 193.4 176 67.0
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 2.6e-47 192.6 183 62.3
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 3.3e-47 192.2 176 68.2
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 4.4e-47 191.8 175 64.6
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.7e-47 191.4 166 64.5
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 7.4e-47 191.0 176 66.5
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 7.4e-47 191.0 171 64.3
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 7.4e-47 191.0 175 66.3
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.3e-46 190.3 137 74.5
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 2.2e-46 189.5 171 61.4
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 2.2e-46 189.5 160 69.4
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.8e-46 189.1 180 64.4
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 4.8e-46 188.3 171 63.2
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 8.2e-46 187.6 184 62.0
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 8.2e-46 187.6 170 64.1
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.4e-45 186.8 168 62.5
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.4e-45 186.8 181 62.4
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.8e-45 186.4 181 60.8
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.8e-45 186.4 168 62.5
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 2.4e-45 186.0 177 62.1
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 3.1e-45 185.7 176 64.2
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 4.1e-45 185.3 184 62.5
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 5.3e-45 184.9 176 63.6
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 9.1e-45 184.1 136 70.6
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.2e-44 183.7 159 65.4
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 1.6e-44 183.3 133 72.9
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.6e-44 183.3 170 62.9
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.6e-44 183.3 153 65.4
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 2.6e-44 182.6 172 61.6
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 3.5e-44 182.2 171 61.4
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 5.9e-44 181.4 176 61.4
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 5.9e-44 181.4 183 58.5
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.0e-43 180.6 178 61.2
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.0e-43 180.6 176 60.8
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.0e-43 180.6 189 58.7
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.3e-43 180.3 110 80.9
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.3e-43 180.3 110 80.9
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.7e-43 179.9 137 69.3
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 1.7e-43 179.9 170 61.2
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.7e-43 179.9 181 58.6
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.7e-43 179.9 170 62.9
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.2e-43 179.5 126 72.2
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.8e-43 178.7 178 60.7
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 3.8e-43 178.7 170 61.2
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 3.8e-43 178.7 180 61.1
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 5.0e-43 178.3 177 61.6
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 5.0e-43 178.3 173 59.5
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 6.5e-43 177.9 140 70.7
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 6.5e-43 177.9 171 60.8
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 6.5e-43 177.9 175 61.7
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.1e-42 177.2 170 60.0
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 1.5e-42 176.8 173 59.0
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.9e-42 176.4 124 71.0
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.9e-42 176.4 180 58.3
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.9e-42 176.4 178 58.4
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 2.5e-42 176.0 172 61.6
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 2.5e-42 176.0 179 59.8
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.2e-42 175.6 175 61.7
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.2e-42 175.6 175 61.7
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 4.2e-42 175.3 112 78.6
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 4.2e-42 175.3 119 76.5
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 4.2e-42 175.3 137 70.1
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 9.4e-42 174.1 112 76.8
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.2e-41 173.7 115 78.3
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 2.7e-41 172.6 160 61.2
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.6e-41 172.2 173 57.8
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 3.6e-41 172.2 183 57.4
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 3.6e-41 172.2 183 57.4
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 8.0e-41 171.0 177 59.9
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 8.0e-41 171.0 180 57.8
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 8.0e-41 171.0 137 67.2
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 8.0e-41 171.0 173 58.4
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 1.0e-40 170.6 174 59.8
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.0e-40 170.6 174 59.8
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.0e-40 170.6 172 60.5
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.4e-40 170.2 180 55.6
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 1.8e-40 169.9 183 55.7
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.3e-40 169.5 185 56.8
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 2.3e-40 169.5 117 72.6
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 3.0e-40 169.1 170 57.1
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 5.2e-40 168.3 169 58.0
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.2e-39 167.2 175 56.6
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.5e-39 166.8 134 66.4
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 1.5e-39 166.8 110 74.5
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 2.0e-39 166.4 103 80.6
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 2.6e-39 166.0 176 56.8
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 3.3e-39 165.6 176 58.0
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.3e-39 165.6 177 58.2
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 3.3e-39 165.6 115 73.0
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 5.7e-39 164.9 178 56.7
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 2.2e-38 162.9 107 74.8
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 3.7e-38 162.2 172 55.2
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 7.7e-36 154.5 168 57.1
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 4.2e-34 148.7 171 53.8
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 9.4e-34 147.5 133 57.1
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 5.2e-32 141.7 85 80.0
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.7e-30 136.7 146 54.1
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 8.3e-30 134.4 110 61.8
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.1e-29 134.0 124 55.6
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 7.0e-29 131.3 113 57.5
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.5e-26 122.9 148 54.1
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 4.2e-26 122.1 177 44.6
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 7.5e-23 111.3 148 48.0
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 4.1e-21 105.5 130 43.1
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.7e-20 102.8 153 40.5
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 1.8e-16 90.1 137 46.0
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 2.6e-15 86.3 133 43.6
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 7.5e-15 84.7 97 52.6


User provided reference genes

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