Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p31540 Brassica napus HOM05D008834 ORTHO05D040119 1.0e-108 396.7 194 100.0
BraA08t35076Z Brassica rapa HOM05D008834 ORTHO05D040119 1.0e-108 396.7 194 100.0
BolC9t54694H Brassica oleracea HOM05D008834 ORTHO05D011314 2.8e-18 96.3 195 39.5
C09p17980 Brassica napus HOM05D008834 ORTHO05D011314 4.7e-18 95.5 195 40.5
BcaC04g22551 Brassica carinata HOM05D008834 ORTHO05D011314 1.1e-17 94.4 195 39.0
A01p21740 Brassica napus HOM05D008834 ORTHO05D011314 1.4e-17 94.0 178 43.8
BraA01t02083Z Brassica rapa HOM05D008834 ORTHO05D011314 1.4e-17 94.0 178 43.8
BraA09t37131Z Brassica rapa HOM05D008834 ORTHO05D011314 5.2e-17 92.0 194 39.7
A09p14850 Brassica napus HOM05D008834 ORTHO05D011314 1.5e-16 90.5 206 40.3
BolC9t54594H Brassica oleracea HOM05D008834 ORTHO05D011314 8.4e-15 84.7 193 38.9
BcaC04g22636 Brassica carinata HOM05D008834 ORTHO05D011314 1.1e-14 84.3 145 41.4
BolC1t02656H Brassica oleracea HOM05D008834 ORTHO05D011314 1.1e-14 84.3 178 42.1
Sp2g30790 Schrenkiella parvula HOM05D008834 ORTHO05D011314 1.1e-14 84.3 160 34.4
A05p21740 Brassica napus HOM05D008834 ORTHO05D011314 1.6e-13 80.5 161 37.3
BraA05t21095Z Brassica rapa HOM05D008834 ORTHO05D011314 1.6e-13 80.5 161 37.3
C09p17130 Brassica napus HOM05D008834 ORTHO05D011314 2.3e-12 76.6 151 39.1
BraA07t31310Z Brassica rapa HOM05D008834 ORTHO05D011314 2.3e-12 76.6 157 41.4
AL3G14310 Arabidopsis lyrata HOM05D008834 ORTHO05D011314 3.0e-12 76.3 163 35.6
BcaC08g46552 Brassica carinata HOM05D008834 ORTHO05D011314 6.6e-12 75.1 203 33.0
AT3G04320 Arabidopsis thaliana HOM05D008834 ORTHO05D011314 1.1e-11 74.3 164 35.4
BolC9t53454H Brassica oleracea HOM05D008834 ORTHO05D011314 1.5e-11 73.9 178 33.1
BcaC04g23732 Brassica carinata HOM05D008834 ORTHO05D011314 2.5e-11 73.2 184 33.2
C09p05270 Brassica napus HOM05D008834 ORTHO05D011314 2.5e-11 73.2 184 33.2
BcaC09g50271 Brassica carinata HOM05D008834 ORTHO05D011314 4.3e-11 72.4 168 37.5
A09p04880 Brassica napus HOM05D008834 ORTHO05D011314 9.6e-11 71.2 184 33.7
Carub.0003s0353 Capsella rubella HOM05D008834 ORTHO05D011314 9.6e-11 71.2 169 32.5
BraA09t36125Z Brassica rapa HOM05D008834 ORTHO05D011314 2.1e-10 70.1 192 33.9
AT3G04330 Arabidopsis thaliana HOM05D008834 ORTHO05D011314 4.8e-10 68.9 159 30.8
Thhalv10010972m.g Eutrema salsugineum HOM05D020464 ORTHO05D023357 3.1e-09 66.2 175 31.4
CARHR078500 Cardamine hirsuta HOM05D008834 ORTHO05D011314 9.0e-09 64.7 164 27.4
Potri.017G153466 Populus trichocarpa HOM05D000535 ORTHO05D000427 3.8e-07 59.3 159 29.6
Potri.017G153600 Populus trichocarpa HOM05D000535 ORTHO05D000427 3.8e-07 59.3 160 29.4
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 6.4e-07 58.5 157 28.7
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 6.4e-07 58.5 157 28.7
Lj9C411T7 Lonicera japonica HOM05D000535 ORTHO05D000427 4.2e-06 55.8 170 30.6
MELO3C002177.2 Cucumis melo HOM05D000535 ORTHO05D000427 7.1e-06 55.1 162 25.9
Aa31sc179G50 Aethionema arabicum HOM05D020464 ORTHO05D023357 9.3e-06 54.7 181 29.8
Eucgr.L01961 Eucalyptus grandis HOM05D000535 ORTHO05D000427 9.3e-06 54.7 161 28.6


User provided reference genes

Program Settings