Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p31410 Brassica napus HOM05D004918 ORTHO05D005706 1.8e-130 469.2 226 100.0
BraA08t35064Z Brassica rapa HOM05D004918 ORTHO05D005706 9.1e-130 466.8 226 99.6
C08p17380 Brassica napus HOM05D004918 ORTHO05D005706 1.6e-121 439.5 225 94.2
BolC8t49364H Brassica oleracea HOM05D004918 ORTHO05D005706 1.6e-121 439.5 225 94.2
BcaC07g38802 Brassica carinata HOM05D004918 ORTHO05D005706 2.0e-121 439.1 225 94.2
Sp1g14360 Schrenkiella parvula HOM05D004918 ORTHO05D005706 6.8e-109 397.5 225 83.6
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 3.4e-108 395.2 222 83.3
A06p12070 Brassica napus HOM05D004918 ORTHO05D005706 7.5e-108 394.0 225 83.1
C05p14240 Brassica napus HOM05D004918 ORTHO05D005706 1.1e-106 390.2 225 82.2
A09p61040 Brassica napus HOM05D004918 ORTHO05D005706 1.4e-106 389.8 225 80.9
BcaC05g25623 Brassica carinata HOM05D004918 ORTHO05D005706 3.2e-106 388.7 225 81.8
BcaB02g06654 Brassica carinata HOM05D004918 ORTHO05D005706 2.7e-105 385.6 217 82.9
BraA09t41477Z Brassica rapa HOM05D004918 ORTHO05D005706 4.6e-105 384.8 225 79.6
BolC5t30156H Brassica oleracea HOM05D004918 ORTHO05D005706 2.3e-104 382.5 226 81.4
BcaB03g14507 Brassica carinata HOM05D004918 ORTHO05D005706 3.0e-104 382.1 222 81.1
BraA06t24376Z Brassica rapa HOM05D004918 ORTHO05D005706 5.0e-104 381.3 226 81.0
Thhalv10008658m.g Eutrema salsugineum HOM05D004918 ORTHO05D005706 2.8e-102 375.6 226 79.6
Aa31LG7G620 Aethionema arabicum HOM05D004918 ORTHO05D005706 5.2e-101 371.3 225 76.0
CARHR016550 Cardamine hirsuta HOM05D004918 ORTHO05D005706 7.5e-100 367.5 212 80.2
Carub.0001s1585 Capsella rubella HOM05D004918 ORTHO05D005706 2.2e-99 365.9 212 79.7
AL1G28210 Arabidopsis lyrata HOM05D004918 ORTHO05D005706 3.7e-99 365.2 212 79.7
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 5.4e-98 361.3 247 71.7
BcaB03g13048 Brassica carinata HOM05D004918 ORTHO05D005706 7.3e-95 350.9 241 74.7
THA.LOC104808174 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 1.9e-87 326.2 223 67.7
THA.LOC104812419 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 3.4e-84 315.5 222 64.9
AT1G16040 Arabidopsis thaliana HOM05D004918 ORTHO05D005706 4.4e-84 315.1 194 73.2
Cpa.g.sc14.108 Carica papaya HOM05D004918 ORTHO05D005706 1.7e-72 276.6 219 57.5
Manes.11G069000 Manihot esculenta HOM05D004918 ORTHO05D005706 1.7e-72 276.6 209 58.9
TAR625G0238 Trochodendron aralioides HOM05D004918 ORTHO05D005706 1.9e-71 273.1 205 59.0
Thecc.06G046100 Theobroma cacao HOM05D004918 ORTHO05D005706 2.5e-71 272.7 209 56.5
Duzib192G0308 Durio zibethinus HOM05D004918 ORTHO05D005706 5.6e-71 271.6 214 54.7
Gorai.009G122300 Gossypium raimondii HOM05D004918 ORTHO05D005706 2.8e-70 269.2 198 58.1
Dinv23270 Davidia involucrata HOM05D004918 ORTHO05D005706 4.8e-70 268.5 213 58.2
CSS0025832 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 6.2e-70 268.1 204 57.4
Ciclev10026430m.g Citrus clementina HOM05D004918 ORTHO05D005706 1.1e-69 267.3 199 59.3
Actinidia25464 Actinidia chinensis HOM05D004918 ORTHO05D005706 3.1e-69 265.8 206 55.8
Potri.003G184701 Populus trichocarpa HOM05D004918 ORTHO05D005706 3.1e-69 265.8 209 58.9
Gohir.A05G117500 Gossypium hirsutum HOM05D004918 ORTHO05D005706 5.3e-69 265.0 210 55.7
Sabra03G0135200 Salix brachista HOM05D004918 ORTHO05D005706 9.0e-69 264.2 204 59.8
Nn2g12451 Nelumbo nucifera HOM05D004918 ORTHO05D005706 1.2e-68 263.8 207 56.0
PGR102G0155 Punica granatum HOM05D004918 ORTHO05D005706 2.6e-68 262.7 221 56.1
DCAR_025541 Daucus carota HOM05D004918 ORTHO05D005706 3.4e-68 262.3 206 56.8
Oeu004556.1 Olea europaea HOM05D004918 ORTHO05D005706 4.5e-68 261.9 203 57.1
Atru.chr1.2801 Acer truncatum HOM05D004918 ORTHO05D005706 9.9e-68 260.8 209 58.9
arahy.Tifrunner.gnm1.ann1.T9YNFF Arachis hypogaea HOM05D004918 ORTHO05D005706 1.3e-67 260.4 209 54.1
MD12G1013200 Malus domestica HOM05D004918 ORTHO05D005706 1.3e-67 260.4 205 60.5
Atru.chr8.1159 Acer truncatum HOM05D004918 ORTHO05D005706 3.8e-67 258.8 198 62.1
Cfa001859 Carpinus fangiana HOM05D004918 ORTHO05D005706 4.9e-67 258.5 195 61.5
TWI12G0375 Tripterygium wilfordii HOM05D004918 ORTHO05D005706 6.4e-67 258.1 209 56.0
Nn2g14031 Nelumbo nucifera HOM05D004918 ORTHO05D005706 8.4e-67 257.7 205 55.6
Peaxi162Scf00314g01045 Petunia axillaris HOM05D004918 ORTHO05D005706 1.4e-66 256.9 206 54.4
Migut.I00673 Erythranthe guttata HOM05D004918 ORTHO05D005706 4.2e-66 255.4 208 54.8
MD14G1138800 Malus domestica HOM05D004918 ORTHO05D005706 4.2e-66 255.4 207 59.9
Glyma.09G000800 Glycine max HOM05D004918 ORTHO05D005706 5.5e-66 255.0 222 50.0
GSVIVG01016107001 Vitis vinifera HOM05D004918 ORTHO05D005706 5.5e-66 255.0 197 58.4
Lj6g0018730 Lotus japonicus HOM05D004918 ORTHO05D005706 7.1e-66 254.6 209 53.1
Medtr3g110270 Medicago truncatula HOM05D004918 ORTHO05D005706 1.2e-65 253.8 204 55.9
TPR.G15094 Trifolium pratense HOM05D004918 ORTHO05D005706 1.2e-65 253.8 216 53.7
MSTRG.22808 Avicennia marina HOM05D004918 ORTHO05D005706 1.6e-65 253.4 194 57.7
Prupe.3G103300 Prunus persica HOM05D004918 ORTHO05D005706 2.1e-65 253.1 205 59.0
ClCG10G012810 Citrullus lanatus HOM05D004918 ORTHO05D005706 1.0e-64 250.8 197 57.4
RcHm_v2.0_Chr2g0132361 Rosa chinensis HOM05D004918 ORTHO05D005706 1.0e-64 250.8 205 56.6
Psat5g020280 Pisum sativum HOM05D004918 ORTHO05D005706 1.8e-64 250.0 197 57.4
Eucgr.F03982 Eucalyptus grandis HOM05D004918 ORTHO05D005706 2.3e-64 249.6 213 55.4
Sc05g0005820 Simmondsia chinensis HOM05D004918 ORTHO05D005706 2.3e-64 249.6 205 52.2
VMungo1309G0542 Vigna mungo HOM05D004918 ORTHO05D005706 2.3e-64 249.6 209 55.0
CsaV3_3G032650 Cucumis sativus L. HOM05D004918 ORTHO05D005706 3.9e-64 248.8 199 57.8
Nitab4.5_0004738g0120 Nicotiana tabacum HOM05D004918 ORTHO05D005706 3.9e-64 248.8 228 51.8
Lalb_Chr13g0301111 Lupinus albus HOM05D004918 ORTHO05D005706 5.1e-64 248.4 209 52.6
Hma1.2p1_1914F.1_g307380 Hydrangea macrophylla HOM05D004918 ORTHO05D005706 6.7e-64 248.1 196 55.6
CiPaw.01G073400 Carya illinoinensis HOM05D004918 ORTHO05D005706 8.7e-64 247.7 203 57.6
Ah.01g002790 Amaranthus hybridus HOM05D004918 ORTHO05D005706 1.9e-63 246.5 200 55.0
SGA_v2.0_scaffold419G51286 Striga asiatica HOM05D004918 ORTHO05D005706 3.3e-63 245.7 212 52.8
Nitab4.5_0002700g0180 Nicotiana tabacum HOM05D004918 ORTHO05D005706 4.3e-63 245.4 222 51.8
Cc04_g05280 Coffea canephora HOM05D004918 ORTHO05D005706 2.1e-62 243.0 222 50.5
CiPaw.02G163500 Carya illinoinensis HOM05D004918 ORTHO05D005706 2.8e-62 242.7 209 54.1
Sed0025979 Sechium edule HOM05D004918 ORTHO05D005706 8.1e-62 241.1 225 50.7
Cc04_g05650 Coffea canephora HOM05D004918 ORTHO05D005706 1.4e-61 240.4 222 49.5
Sopen03g036560 Solanum pennellii HOM05D004918 ORTHO05D005706 1.4e-61 240.4 204 52.5
ECA232G4560 Erigeron canadensis HOM05D004918 ORTHO05D005706 3.1e-61 239.2 221 50.7
PGSC0003DMG402014462 Solanum tuberosum HOM05D004918 ORTHO05D005706 3.1e-61 239.2 220 49.5
Phvul.009G194500 Phaseolus vulgaris HOM05D004918 ORTHO05D005706 5.3e-61 238.4 223 48.9
PGSC0003DMG400014153 Solanum tuberosum HOM05D004918 ORTHO05D005706 9.0e-61 237.7 209 51.7
QL10p031453 Quercus lobata HOM05D004918 ORTHO05D005706 1.2e-60 237.3 174 59.2
CDE02G0643 Ceratophyllum demersum HOM05D004918 ORTHO05D005706 3.4e-60 235.7 203 53.2
CANSAT35G0550 Cannabis sativa HOM05D004918 ORTHO05D005706 4.5e-60 235.3 195 53.3
HanXRQChr17g0561891 Helianthus annuus HOM05D004918 ORTHO05D005706 4.5e-60 235.3 193 57.5
SalBow8G2778 Salvia bowleyana HOM05D004918 ORTHO05D005706 5.8e-60 235.0 212 50.5
PSO729G0217 Papaver somniferum HOM05D004918 ORTHO05D005706 1.0e-59 234.2 223 47.5
COL.COLO4_24896 Corchorus olitorius HOM05D004918 ORTHO05D005706 1.7e-59 233.4 195 53.8
PSO017G2949 Papaver somniferum HOM05D004918 ORTHO05D005706 2.9e-59 232.6 223 47.1
PSO724G0600 Papaver somniferum HOM05D004918 ORTHO05D005706 2.9e-59 232.6 223 47.1
MBI19_g12142_MAGBIO Magnolia biondii HOM05D004918 ORTHO05D005706 4.9e-59 231.9 209 51.7
FAN09G4697 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.4e-58 230.3 217 50.2
HanXRQChr10g0298641 Helianthus annuus HOM05D004918 ORTHO05D005706 1.9e-58 229.9 190 55.8
arahy.Tifrunner.gnm1.ann1.ZUNL57 Arachis hypogaea HOM05D004918 ORTHO05D005706 7.1e-58 228.0 219 48.4
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 2.1e-57 226.5 185 57.8
PSO063G6564 Papaver somniferum HOM05D004918 ORTHO05D005706 3.9e-56 222.2 220 45.0
MELO3C028676.2 Cucumis melo HOM05D004918 ORTHO05D005706 5.1e-56 221.9 199 53.8
Sopen12g021620 Solanum pennellii HOM05D004918 ORTHO05D005706 2.5e-55 219.5 220 46.8
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 7.4e-55 218.0 187 52.9
SEGI_14369 Sequoiadendron giganteum HOM05D004918 ORTHO05D005706 1.3e-54 217.2 187 49.7
Glyma.09G000900 Glycine max HOM05D004918 ORTHO05D005706 2.1e-54 216.5 167 54.5
Oeu035883.1 Olea europaea HOM05D004918 ORTHO05D005706 8.2e-54 214.5 174 55.2
FAN02G2144 Fragaria x ananassa HOM05D004918 ORTHO05D005706 3.1e-53 212.6 228 46.5
Solyc12g042530.2 Solanum lycopersicum HOM05D004918 ORTHO05D005706 3.1e-53 212.6 220 45.5
Solyc03g117650.4 Solanum lycopersicum HOM05D004918 ORTHO05D005706 3.4e-52 209.1 204 48.0
Lsat_1_v5_gn_4_85101 Lactuca sativa HOM05D004918 ORTHO05D005706 8.4e-51 204.5 188 51.6
Zm00001eb403520 Zea mays HOM05D004918 ORTHO05D005706 8.4e-51 204.5 181 53.6
HanXRQChr16g0499441 Helianthus annuus HOM05D004918 ORTHO05D005706 2.5e-50 203.0 194 52.1
HPP92_001544 Vanilla planifolia HOM05D004918 ORTHO05D005706 3.2e-50 202.6 198 48.5
SHI05687 Sapria himalayana HOM05D004918 ORTHO05D005706 4.2e-50 202.2 180 48.3
Haze_16687 Corylus avellana HOM05D004918 ORTHO05D005706 1.2e-49 200.7 176 55.7
vmacro19072 Vaccinium macrocarpon HOM05D004918 ORTHO05D005706 1.0e-48 197.6 203 47.8
CAN.G276.2 Capsicum annuum HOM05D004918 ORTHO05D005706 3.9e-48 195.7 158 56.3
FAN09G3573 Fragaria x ananassa HOM05D004918 ORTHO05D005706 5.1e-48 195.3 226 45.1
ATR0568G024 Amborella trichopoda HOM05D004918 ORTHO05D005706 6.7e-48 194.9 175 48.6
Os03g0129000 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 6.3e-46 188.3 201 46.3
Aqoxy4G02614 Aquilegia oxysepala HOM05D004918 ORTHO05D005706 5.3e-45 185.3 116 65.5
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 1.7e-43 180.3 198 43.4
Pp3c8_15970 Physcomitrium patens HOM05D004918 ORTHO05D005706 2.9e-43 179.5 215 41.4
unitig_62.g23577 Utricularia gibba HOM05D004918 ORTHO05D005706 1.1e-42 177.6 247 38.9
arahy.Tifrunner.gnm1.ann1.BN6NH6 Arachis hypogaea HOM05D004918 ORTHO05D005706 2.1e-41 173.3 204 42.6
arahy.Tifrunner.gnm1.ann1.U5XJV3 Arachis hypogaea HOM05D004918 ORTHO05D005706 6.1e-41 171.8 190 45.3
FAN14G3036 Fragaria x ananassa HOM05D004918 ORTHO05D005706 6.1e-41 171.8 246 41.9
Ca_15577_v3 Cicer arietinum L. HOM05D004918 ORTHO05D005706 6.7e-40 168.3 108 66.7
CAN.G1008.5 Capsicum annuum HOM05D000348 ORTHO05D005706 2.5e-39 166.4 116 62.1
Mapoly0005s0096 Marchantia polymorpha HOM05D004918 ORTHO05D005706 5.7e-39 165.2 208 38.9
FvH4_6g28300 Fragaria vesca HOM05D004918 ORTHO05D005706 3.2e-34 149.4 135 55.6
CBR_g41678 Chara braunii HOM05D004918 ORTHO05D005706 1.2e-33 147.5 129 48.8
BcaC03g14995 Brassica carinata HOM05D004918 ORTHO05D005706 4.2e-26 122.5 67 85.1
SMO351G0301 Selaginella moellendorffii HOM05D004918 ORTHO05D005706 1.6e-25 120.6 137 43.1
Gohir.D05G118400 Gossypium hirsutum HOM05D004918 ORTHO05D005706 6.7e-24 115.2 106 50.0
BcaC05g25622 Brassica carinata HOM05D004918 ORTHO05D005706 1.1e-23 114.4 53 90.6
AagrBONN_evm.TU.Sc2ySwM_344.4108 Anthoceros agrestis HOM05D004918 ORTHO05D005706 3.7e-22 109.4 80 52.5
Os10g0200800 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 2.9e-19 99.8 70 52.9
CAN.G548.17 Capsicum annuum HOM05D002478 ORTHO05D005706 4.7e-17 92.4 94 45.7
CAN.G1986.5 Capsicum annuum HOM05D004918 ORTHO05D005706 3.0e-16 89.7 61 54.1
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 6.8e-16 88.6 73 50.7
CAN.G53.21 Capsicum annuum HOM05D002478 ORTHO05D020307 1.2e-15 87.8 56 62.5
Zm00001eb002240 Zea mays HOM05D004918 ORTHO05D005706 2.4e-13 80.1 95 49.5
AUR62034078 Chenopodium quinoa HOM05D004918 ORTHO05D005706 3.5e-12 76.3 52 65.4
CSS0035645 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 4.5e-12 75.9 80 52.5
MELO3C000966.2 Cucumis melo HOM05D004918 ORTHO05D005706 1.0e-11 74.7 82 45.1
Actinidia08937 Actinidia chinensis HOM05D004918 ORTHO05D005706 1.7e-11 73.9 49 61.2
Cfa026120 Carpinus fangiana HOM05D004918 ORTHO05D125238 1.7e-11 73.9 158 30.4
Sed0005872 Sechium edule HOM05D004918 ORTHO05D005706 1.7e-11 73.9 82 46.3
AUR62012861 Chenopodium quinoa HOM05D004918 ORTHO05D005706 1.1e-10 71.2 51 62.7
MCO15G581 Micromonas commoda HOM05D004918 ORTHO05D005706 1.4e-08 64.3 154 28.6
MELO3C032630.2 Cucumis melo HOM05D004918 ORTHO05D005706 2.0e-07 60.5 67 43.3
CSS0004145 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 2.2e-06 57.0 76 47.4
CAN.G1235.23 Capsicum annuum HOM05D004918 ORTHO05D005706 2.2e-06 57.0 31 64.5


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