Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 0.0e+00 1148.3 572 100.0
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 0.0e+00 1148.3 572 100.0
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 0.0e+00 1129.4 572 97.9
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 0.0e+00 1122.8 568 97.9
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 0.0e+00 1100.9 572 95.6
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 0.0e+00 1097.4 572 94.4
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 0.0e+00 1096.3 572 94.8
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 0.0e+00 1093.2 573 94.9
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 0.0e+00 1090.5 572 94.2
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 0.0e+00 1085.9 572 93.7
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 0.0e+00 1085.1 572 93.7
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 0.0e+00 1082.0 573 93.7
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 0.0e+00 1079.3 563 94.1
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 3.9e-312 1074.3 563 94.5
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 4.0e-307 1057.4 573 91.3
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 3.4e-306 1054.3 573 90.9
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 8.3e-305 1049.7 574 90.1
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 1.9e-301 1038.5 575 89.7
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 9.3e-288 993.0 568 85.9
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 2.2e-281 971.8 554 87.4
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 7.4e-261 903.7 567 76.4
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 4.8e-260 901.0 574 76.7
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 1.1e-259 899.8 569 76.3
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 4.1e-259 897.9 569 76.1
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 6.9e-259 897.1 574 76.1
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 1.7e-257 892.5 569 75.4
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 2.2e-257 892.1 577 75.0
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 2.2e-257 892.1 565 75.2
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 2.9e-257 891.7 600 72.8
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 8.5e-257 890.2 572 75.0
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 8.5e-257 890.2 567 75.1
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 1.4e-256 889.4 569 75.6
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.2e-255 886.3 569 75.2
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 4.6e-255 884.4 568 74.6
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 6.1e-255 884.0 567 74.8
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 1.8e-254 882.5 575 74.6
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 2.3e-254 882.1 567 74.6
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 2.3e-254 882.1 572 74.1
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 2.3e-254 882.1 566 74.0
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 5.1e-254 880.9 577 74.4
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 8.8e-254 880.2 548 76.8
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 1.9e-253 879.0 576 73.8
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 4.3e-253 877.9 567 73.7
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 5.7e-253 877.5 576 74.7
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 5.7e-253 877.5 567 73.7
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 9.7e-253 876.7 568 74.1
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 8.2e-252 873.6 548 76.8
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 1.4e-251 872.8 569 73.3
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 3.1e-251 871.7 566 73.9
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 5.3e-251 870.9 567 72.7
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 6.9e-251 870.5 567 73.4
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 9.1e-251 870.2 569 74.7
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 2.0e-250 869.0 565 74.9
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 2.0e-250 869.0 566 74.4
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 2.0e-250 869.0 567 73.0
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 1.0e-249 866.7 552 74.5
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 2.9e-249 865.1 569 73.8
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 2.9e-249 865.1 570 74.0
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 3.8e-249 864.8 568 73.9
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 5.0e-249 864.4 566 73.3
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 5.0e-249 864.4 573 72.9
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 1.4e-248 862.8 567 73.0
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 4.2e-248 861.3 571 72.9
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 5.5e-248 860.9 566 73.7
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 1.2e-247 859.8 567 73.0
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 3.6e-247 858.2 567 72.0
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 3.6e-247 858.2 568 72.9
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 6.1e-247 857.4 568 73.1
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 7.9e-247 857.1 568 72.7
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 1.8e-246 855.9 568 72.5
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 6.7e-246 854.0 580 71.9
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 2.6e-245 852.0 570 72.8
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 2.8e-244 848.6 568 72.4
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 3.1e-243 845.1 569 70.7
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 5.3e-243 844.3 514 77.4
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 9.1e-243 843.6 531 75.5
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 1.2e-242 843.2 567 72.3
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 2.6e-242 842.0 561 71.7
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 5.0e-241 837.8 574 70.9
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 5.0e-241 837.8 574 71.1
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 1.4e-240 836.3 571 71.3
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 1.9e-240 835.9 531 75.3
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 4.2e-240 834.7 620 68.4
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 8.0e-239 830.5 575 71.3
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 1.1e-237 826.6 573 69.3
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 1.1e-237 826.6 556 71.9
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 2.0e-237 825.9 552 70.5
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 4.1e-235 818.1 514 74.7
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 4.1e-235 818.1 568 68.7
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 1.0e-233 813.5 529 74.1
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 3.6e-231 805.1 604 64.7
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 8.0e-231 803.9 587 68.0
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 5.7e-229 797.7 528 70.5
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 1.3e-228 796.6 570 68.1
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 4.8e-228 794.7 564 68.6
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 1.6e-226 789.6 567 66.7
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 7.2e-224 780.8 569 67.0
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 3.5e-218 761.9 497 74.2
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 2.5e-216 755.7 620 60.8
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 9.5e-216 753.8 481 74.4
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 1.2e-202 710.3 448 75.9
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 1.6e-202 709.9 574 63.1
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 1.6e-191 673.3 437 73.7
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 4.0e-190 668.7 408 78.2
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 3.4e-189 665.6 439 72.2
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 7.1e-187 657.9 434 74.0
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 3.5e-186 655.6 428 74.8
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 3.2e-179 632.5 542 57.6
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 1.8e-174 616.7 422 72.0
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 4.9e-172 608.6 430 72.6
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 9.9e-157 557.8 434 67.1
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 1.3e-151 540.8 563 49.7
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 1.4e-150 537.3 549 51.7
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 2.4e-150 536.6 535 50.5
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 1.1e-147 527.7 369 71.8
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 1.4e-121 441.0 626 39.6
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 2.3e-121 440.3 377 59.9
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 4.3e-91 339.7 276 64.9
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-90 337.8 222 68.5
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 4.6e-85 319.7 213 74.2
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.0e-84 318.5 581 38.7
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 3.1e-81 307.0 387 47.0
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 6.0e-77 292.7 223 60.5
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 2.1e-69 267.7 584 33.0
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 3.3e-67 260.4 550 33.6
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 5.8e-56 223.0 452 34.7
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 7.9e-53 212.6 148 72.3
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 3.9e-52 210.3 148 70.9
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 2.0e-48 198.0 136 72.8
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 1.9e-46 191.4 126 69.0
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 5.3e-41 173.3 106 77.4
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 6.9e-41 172.9 182 57.1
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 9.0e-41 172.6 95 74.7
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 4.8e-26 123.6 85 70.6
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 4.8e-18 97.1 74 59.5
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 2.0e-16 91.7 50 76.0
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 2.0e-16 91.7 63 61.9
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 5.1e-12 77.0 59 67.8
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 1.7e-10 72.0 327 26.9
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 3.7e-10 70.9 327 26.6
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 4.8e-10 70.5 361 24.1
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 7.0e-09 66.6 56 55.4
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 2.0e-08 65.1 328 23.2
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 2.0e-08 65.1 328 23.2
C05p00060 Brassica napus HOM05D006213 ORTHO05D008107 3.5e-08 64.3 327 22.6
BolC5t28793H Brassica oleracea HOM05D006213 ORTHO05D008107 3.5e-08 64.3 327 22.6
Sp1g00110 Schrenkiella parvula HOM05D006213 ORTHO05D008107 5.9e-08 63.5 328 22.6
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 1.3e-07 62.4 323 27.2
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 3.8e-07 60.8 427 25.1
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 8.5e-07 59.7 327 24.2
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 1.1e-06 59.3 291 24.7
Thecc.01G397800 Theobroma cacao HOM05D006213 ORTHO05D008107 1.1e-06 59.3 320 24.1
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 1.5e-06 58.9 314 23.6
BcaB03g13635 Brassica carinata HOM05D006213 ORTHO05D008107 4.2e-06 57.4 317 22.4
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 4.2e-06 57.4 318 24.5
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 4.2e-06 57.4 330 24.8
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 5.5e-06 57.0 308 22.7
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 7.2e-06 56.6 302 24.5
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 9.4e-06 56.2 309 23.9


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