Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p31200 Brassica napus HOM05D009829 ORTHO05D012418 1.9e-46 188.7 91 100.0
C08p17660 Brassica napus HOM05D009829 ORTHO05D012418 9.6e-46 186.4 91 98.9
BolC8t49391H Brassica oleracea HOM05D009829 ORTHO05D012418 9.6e-46 186.4 91 98.9
BraA08t35043Z Brassica rapa HOM05D009829 ORTHO05D012418 1.6e-45 185.7 91 97.8
BcaC07g38826 Brassica carinata HOM05D009829 ORTHO05D012418 2.4e-44 181.8 91 96.7
BcaB03g13023 Brassica carinata HOM05D009829 ORTHO05D012418 1.7e-42 175.6 91 92.3
Sp1g15090 Schrenkiella parvula HOM05D009829 ORTHO05D012418 1.3e-34 149.4 96 80.2
Thhalv10009335m.g Eutrema salsugineum HOM05D009829 ORTHO05D012418 6.4e-34 147.1 95 80.0
C05p15270 Brassica napus HOM05D009829 ORTHO05D012418 2.4e-33 145.2 95 76.8
BcaC05g25551 Brassica carinata HOM05D009829 ORTHO05D012418 3.2e-33 144.8 95 75.8
A06p12860 Brassica napus HOM05D009829 ORTHO05D012418 9.3e-33 143.3 95 75.8
BraA06t24446Z Brassica rapa HOM05D009829 ORTHO05D012418 9.3e-33 143.3 95 75.8
BcaB02g06660 Brassica carinata HOM05D009829 ORTHO05D012418 2.7e-32 141.7 95 74.7
BcaB02g06661 Brassica carinata HOM05D009829 ORTHO05D012418 2.7e-32 141.7 95 74.7
BcaC07g41449 Brassica carinata HOM05D009829 ORTHO05D012418 1.0e-31 139.8 95 75.8
Carub.0001s1668 Capsella rubella HOM05D009829 ORTHO05D012418 2.8e-29 131.7 95 72.6
AL1G29130 Arabidopsis lyrata HOM05D009829 ORTHO05D012418 3.7e-29 131.3 95 70.5
AT1G16950 Arabidopsis thaliana HOM05D009829 ORTHO05D012418 3.1e-28 128.3 95 70.5
CARHR017460 Cardamine hirsuta HOM05D009829 ORTHO05D012418 1.2e-27 126.3 94 70.2
A09p60670 Brassica napus HOM05D009829 ORTHO05D000015 1.5e-27 125.9 77 80.5
BraA09t41438Z Brassica rapa HOM05D009829 ORTHO05D000015 1.5e-27 125.9 77 80.5
C08p44170 Brassica napus HOM05D009829 ORTHO05D000015 2.0e-27 125.6 77 79.2
BolC8t51964H Brassica oleracea HOM05D009829 ORTHO05D000015 2.0e-27 125.6 77 79.2
BolC5t30233H Brassica oleracea HOM05D009829 ORTHO05D012418 5.8e-27 124.0 76 78.9
Aa31LG7G1380 Aethionema arabicum HOM05D009829 ORTHO05D012418 5.9e-19 97.4 65 75.4
Nn3g21078 Nelumbo nucifera HOM05D005059 ORTHO05D004248 1.0e-10 70.1 92 50.0
THA.LOC109116623 Tarenaya hassleriana HOM05D009829 ORTHO05D012418 2.2e-10 68.9 91 46.2
Glyma.08G118500 Glycine max HOM05D005059 ORTHO05D004248 5.0e-10 67.8 87 49.4
CAN.G411.50 Capsicum annuum HOM05D005059 ORTHO05D004248 1.9e-09 65.9 97 43.3
QL05p049931 Quercus lobata HOM05D005059 ORTHO05D004248 2.5e-09 65.5 89 44.9
Phvul.002G241108 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 5.5e-09 64.3 100 43.0
PGSC0003DMG400028485 Solanum tuberosum HOM05D005059 ORTHO05D004248 7.2e-09 63.9 91 47.3
Sopen02g021130 Solanum pennellii HOM05D005059 ORTHO05D004248 9.4e-09 63.5 84 42.9
Nn6g34461 Nelumbo nucifera HOM05D005059 ORTHO05D004248 1.2e-08 63.2 92 44.6
Glyma.05G161100 Glycine max HOM05D005059 ORTHO05D004248 1.6e-08 62.8 91 45.1
Haze_06169 Corylus avellana HOM05D005059 ORTHO05D004248 2.1e-08 62.4 92 47.8
Lsat_1_v5_gn_7_25601 Lactuca sativa HOM05D005059 ORTHO05D004248 3.6e-08 61.6 84 46.4
Dinv18371 Davidia involucrata HOM05D000126 ORTHO05D000085 7.9e-08 60.5 94 39.4
Manes.17G059300 Manihot esculenta HOM05D005059 ORTHO05D004248 7.9e-08 60.5 101 43.6
PGR042G3020 Punica granatum HOM05D005059 ORTHO05D004248 7.9e-08 60.5 97 40.2
Sabra04G0040600 Salix brachista HOM05D005059 ORTHO05D004248 1.8e-07 59.3 57 54.4
Potri.004G061300 Populus trichocarpa HOM05D005059 ORTHO05D004248 2.3e-07 58.9 99 40.4
Thecc.06G165400 Theobroma cacao HOM05D005059 ORTHO05D004248 2.3e-07 58.9 94 42.6
TAR624G0872 Trochodendron aralioides HOM05D005059 ORTHO05D004248 2.3e-07 58.9 91 45.1
MBI06_g16696_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 3.9e-07 58.2 86 45.3
TAR626G0600 Trochodendron aralioides HOM05D005059 ORTHO05D004248 3.9e-07 58.2 91 45.1
Glyma.13G226600 Glycine max HOM05D005059 ORTHO05D004248 5.1e-07 57.8 88 46.6
MD10G1275500 Malus domestica HOM05D005059 ORTHO05D004248 5.1e-07 57.8 96 42.7
TAR627G0439 Trochodendron aralioides HOM05D005059 ORTHO05D004248 6.7e-07 57.4 88 47.7
Cfa000656 Carpinus fangiana HOM05D005059 ORTHO05D004248 8.8e-07 57.0 96 47.9
SalBow7G3765 Salvia bowleyana HOM05D005059 ORTHO05D004248 8.8e-07 57.0 52 53.8
TWI53G1149 Tripterygium wilfordii HOM05D005059 ORTHO05D004248 8.8e-07 57.0 97 38.1
TAR624G0770 Trochodendron aralioides HOM05D005059 ORTHO05D004248 8.8e-07 57.0 52 55.8
arahy.Tifrunner.gnm1.ann1.YNVN02 Arachis hypogaea HOM05D005059 ORTHO05D004248 1.1e-06 56.6 92 41.3
Phvul.006G173000 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 1.1e-06 56.6 87 46.0
Cc02_g15600 Coffea canephora HOM05D005059 ORTHO05D004248 2.0e-06 55.8 95 40.0
COL.COLO4_31233 Corchorus olitorius HOM05D005059 ORTHO05D004248 2.0e-06 55.8 52 55.8
Medtr8g087390 Medicago truncatula HOM05D005059 ORTHO05D004248 2.6e-06 55.5 62 45.2
arahy.Tifrunner.gnm1.ann1.YXRF57 Arachis hypogaea HOM05D005059 ORTHO05D004248 3.3e-06 55.1 104 40.4
MD00G1009200 Malus domestica HOM05D005059 ORTHO05D004248 3.3e-06 55.1 93 45.2
MD00G1221100 Malus domestica HOM05D005059 ORTHO05D004248 3.3e-06 55.1 93 45.2
CSS0038855 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 4.4e-06 54.7 93 37.6
Lj6g0009726 Lotus japonicus HOM05D005059 ORTHO05D004248 4.4e-06 54.7 58 50.0
Oeu043118.1 Olea europaea HOM05D005059 ORTHO05D004248 4.4e-06 54.7 91 41.8
Psat1g194640 Pisum sativum HOM05D005059 ORTHO05D004248 4.4e-06 54.7 74 41.9
AT1G29290 Arabidopsis thaliana HOM05D005059 ORTHO05D004248 5.7e-06 54.3 66 48.5
Migut.M01008 Erythranthe guttata HOM05D005059 ORTHO05D004248 5.7e-06 54.3 91 38.5
FAN11G2282 Fragaria x ananassa HOM05D005059 ORTHO05D004248 5.7e-06 54.3 98 43.9
AL1G43080 Arabidopsis lyrata HOM05D005059 ORTHO05D004248 7.4e-06 53.9 66 48.5
MBI07_g00460_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 7.4e-06 53.9 60 48.3
Rhsim13G0187800 Rhododendron simsii HOM05D005059 ORTHO05D004248 7.4e-06 53.9 67 46.3
Ca_00473_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 9.7e-06 53.5 95 34.7
Migut.H01411 Erythranthe guttata HOM05D005059 ORTHO05D004248 9.7e-06 53.5 59 45.8
Hma1.2p1_0113F.1_g055120 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 9.7e-06 53.5 51 54.9


User provided reference genes

Program Settings