Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 5.8e-74 280.8 141 100.0
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 5.8e-74 280.8 141 100.0
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 9.6e-69 263.5 142 95.1
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 9.6e-69 263.5 142 95.1
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 1.4e-67 259.6 142 94.4
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 1.9e-56 222.6 143 80.4
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 1.6e-52 209.5 145 78.6
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 3.6e-52 208.4 143 79.7
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 6.9e-43 177.6 146 67.1
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 2.3e-38 162.5 97 83.5
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 8.2e-36 154.1 126 71.4
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 5.7e-29 131.3 98 74.5
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 6.3e-20 101.3 78 73.1
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 5.3e-19 98.2 101 59.4
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.2e-18 97.1 99 58.6
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.2e-18 97.1 99 58.6
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 2.6e-18 95.9 99 58.6
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 7.7e-18 94.4 102 53.9
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 2.9e-17 92.4 100 56.0
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 6.5e-17 91.3 99 57.6
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 6.5e-17 91.3 99 57.6
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 5.5e-16 88.2 116 47.4
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 9.4e-16 87.4 74 67.6
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 9.4e-16 87.4 74 67.6
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 9.4e-16 87.4 103 57.3
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.6e-15 86.7 87 57.5
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.6e-15 86.7 87 57.5
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.6e-15 86.7 127 44.9
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 1.6e-15 86.7 93 54.8
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 4.7e-15 85.1 99 54.5
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.7e-15 85.1 82 56.1
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 4.7e-15 85.1 88 50.0
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 6.1e-15 84.7 79 55.7
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 7.9e-15 84.3 89 51.7
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 1.0e-14 84.0 99 54.5
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 1.0e-14 84.0 99 54.5
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.0e-14 84.0 131 42.7
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.4e-14 83.6 123 43.1
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 1.4e-14 83.6 138 39.9
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 3.0e-14 82.4 86 52.3
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.0e-14 82.4 123 42.3
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 3.0e-14 82.4 88 53.4
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 3.9e-14 82.0 96 53.1
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 3.9e-14 82.0 143 39.9
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 5.2e-14 81.6 90 51.1
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 5.2e-14 81.6 79 58.2
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 5.2e-14 81.6 88 52.3
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 6.7e-14 81.3 91 49.5
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 6.7e-14 81.3 90 52.2
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 8.8e-14 80.9 100 51.0
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 8.8e-14 80.9 90 50.0
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 1.1e-13 80.5 91 54.9
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 1.1e-13 80.5 100 52.0
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.1e-13 80.5 123 42.3
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 1.1e-13 80.5 93 50.5
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.5e-13 80.1 76 63.2
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 1.5e-13 80.1 79 60.8
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 2.0e-13 79.7 93 53.8
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.0e-13 79.7 117 44.4
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 2.6e-13 79.3 90 48.9
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 3.3e-13 79.0 120 44.2
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.3e-13 79.0 92 50.0
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 3.3e-13 79.0 92 50.0
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 4.4e-13 78.6 99 52.5
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.4e-13 77.8 92 48.9
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 9.7e-13 77.4 79 55.7
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 1.7e-12 76.6 83 51.8
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 2.2e-12 76.3 79 58.2
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 2.2e-12 76.3 84 51.2
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.8e-12 75.9 94 46.8
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.8e-12 75.9 92 45.7
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 3.7e-12 75.5 91 49.5
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 3.7e-12 75.5 79 58.2
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 4.8e-12 75.1 80 56.2
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.8e-12 75.1 94 46.8
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 6.3e-12 74.7 106 43.4
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 8.2e-12 74.3 126 42.9
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 1.1e-11 73.9 80 52.5
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.1e-11 73.9 94 46.8
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 1.4e-11 73.6 89 43.8
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 1.4e-11 73.6 85 52.9
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 5.3e-11 71.6 127 39.4
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 7.0e-11 71.2 91 45.1
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 7.0e-11 71.2 127 39.4
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.6e-10 70.1 93 45.2
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 1.6e-10 70.1 129 37.2
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 2.0e-10 69.7 77 49.4
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 2.0e-10 69.7 108 39.8
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.6e-10 69.3 80 47.5
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 3.5e-10 68.9 121 38.0
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 3.5e-10 68.9 111 42.3
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 5.9e-10 68.2 113 44.2
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 7.7e-10 67.8 73 54.8
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.2e-09 66.2 127 36.2
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 3.8e-09 65.5 113 38.1
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 5.0e-09 65.1 87 48.3
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 5.0e-09 65.1 74 48.6
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 1.1e-08 63.9 81 54.3
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 2.5e-08 62.8 75 52.0
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.6e-07 60.1 113 36.3
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.6e-07 60.1 129 35.7
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 2.1e-07 59.7 77 48.1


User provided reference genes

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