Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p29230 Brassica napus HOM05D001775 ORTHO05D009111 4.0e-50 201.1 98 100.0
BraA08t34858Z Brassica rapa HOM05D001775 ORTHO05D009111 4.0e-50 201.1 98 100.0
AT1G20810 Arabidopsis thaliana HOM05D001775 ORTHO05D009111 3.7e-43 177.9 95 91.6
Thhalv10008601m.g Eutrema salsugineum HOM05D001775 ORTHO05D009111 3.7e-43 177.9 95 91.6
AL1G33810 Arabidopsis lyrata HOM05D001775 ORTHO05D009111 4.8e-43 177.6 95 91.6
Carub.0001s2026 Capsella rubella HOM05D001775 ORTHO05D009111 8.2e-43 176.8 95 90.5
Sp1g18500 Schrenkiella parvula HOM05D001775 ORTHO05D009111 8.2e-43 176.8 95 90.5
BcaC05g25982 Brassica carinata HOM05D001775 ORTHO05D009111 1.1e-42 176.4 95 91.6
C05p19360 Brassica napus HOM05D001775 ORTHO05D009111 1.1e-42 176.4 95 91.6
BraA06t24787Z Brassica rapa HOM05D001775 ORTHO05D009111 1.1e-42 176.4 95 91.6
BcaB07g32073 Brassica carinata HOM05D001775 ORTHO05D009111 1.8e-42 175.6 95 90.5
A06p16800 Brassica napus HOM05D001775 ORTHO05D009111 1.8e-42 175.6 95 90.5
Aa31LG7G4970 Aethionema arabicum HOM05D001775 ORTHO05D009111 1.5e-41 172.6 95 89.5
CARHR021230 Cardamine hirsuta HOM05D001775 ORTHO05D009111 2.6e-41 171.8 95 88.4
CiPaw.08G076300 Carya illinoinensis HOM05D001775 ORTHO05D009111 6.1e-38 160.6 96 78.1
BcaB03g16041 Brassica carinata HOM05D001775 ORTHO05D009111 1.0e-37 159.8 89 88.8
THA.LOC104813746 Tarenaya hassleriana HOM05D001775 ORTHO05D009111 1.0e-37 159.8 95 80.0
PGR083G0637 Punica granatum HOM05D001775 ORTHO05D009111 5.1e-37 157.5 96 79.2
Cpa.g.sc26.153 Carica papaya HOM05D001775 ORTHO05D009111 2.0e-36 155.6 95 76.8
Peaxi162Scf00680g00417 Petunia axillaris HOM05D001775 ORTHO05D009111 2.0e-36 155.6 96 75.0
MELO3C017046.2 Cucumis melo HOM05D001775 ORTHO05D009111 2.5e-36 155.2 95 76.8
CsaV3_4G037510 Cucumis sativus L. HOM05D001775 ORTHO05D009111 2.5e-36 155.2 95 76.8
Gohir.A01G102700 Gossypium hirsutum HOM05D001775 ORTHO05D009111 3.3e-36 154.8 95 76.8
Gohir.A01G103050 Gossypium hirsutum HOM05D001775 ORTHO05D009111 3.3e-36 154.8 95 76.8
Gorai.002G113700 Gossypium raimondii HOM05D001775 ORTHO05D009111 3.3e-36 154.8 95 76.8
CiPaw.07G135100 Carya illinoinensis HOM05D001775 ORTHO05D009111 4.3e-36 154.5 95 75.8
Haze_22843 Corylus avellana HOM05D001775 ORTHO05D009111 4.3e-36 154.5 96 78.1
Solyc04g082660.2 Solanum lycopersicum HOM05D001775 ORTHO05D009111 4.3e-36 154.5 96 75.0
Sopen04g036290 Solanum pennellii HOM05D001775 ORTHO05D009111 4.3e-36 154.5 96 75.0
PGSC0003DMG400009916 Solanum tuberosum HOM05D001775 ORTHO05D009111 4.3e-36 154.5 96 75.0
arahy.Tifrunner.gnm1.ann1.F3SGCQ Arachis hypogaea HOM05D001775 ORTHO05D009111 5.7e-36 154.1 96 75.0
arahy.Tifrunner.gnm1.ann1.LVT2R8 Arachis hypogaea HOM05D001775 ORTHO05D009111 5.7e-36 154.1 96 75.0
TAR628G0795 Trochodendron aralioides HOM05D002588 ORTHO05D002979 5.7e-36 154.1 96 76.0
Ciclev10002424m.g Citrus clementina HOM05D001775 ORTHO05D009111 7.4e-36 153.7 95 75.8
Nitab4.5_0001756g0210 Nicotiana tabacum HOM05D001775 ORTHO05D009111 7.4e-36 153.7 96 74.0
Sc26g0004700 Simmondsia chinensis HOM05D001775 ORTHO05D009111 7.4e-36 153.7 95 77.9
Gohir.D01G088000 Gossypium hirsutum HOM05D001775 ORTHO05D009111 9.7e-36 153.3 95 75.8
Actinidia37910 Actinidia chinensis HOM05D001775 ORTHO05D009111 1.3e-35 152.9 95 74.7
Ah.00g001110 Amaranthus hybridus HOM05D001775 ORTHO05D009111 1.3e-35 152.9 95 73.7
CAN.G2106.1 Capsicum annuum HOM05D001775 ORTHO05D009111 1.3e-35 152.9 96 75.0
Medtr3g115970 Medicago truncatula HOM05D001775 ORTHO05D009111 1.3e-35 152.9 96 74.0
QL02p015424 Quercus lobata HOM05D001775 ORTHO05D009111 1.3e-35 152.9 95 74.7
COL.COLO4_37860 Corchorus olitorius HOM05D001775 ORTHO05D009111 1.7e-35 152.5 95 73.7
Lj4C811T3 Lonicera japonica HOM05D001775 ORTHO05D009111 1.7e-35 152.5 96 77.1
Sed0011537 Sechium edule HOM05D001775 ORTHO05D009111 1.7e-35 152.5 96 75.0
MSTRG.998 Avicennia marina HOM05D001775 ORTHO05D009111 2.2e-35 152.1 95 74.7
AUR62024106 Chenopodium quinoa HOM05D001775 ORTHO05D009111 2.8e-35 151.8 95 74.7
TWI12G0704 Tripterygium wilfordii HOM05D001775 ORTHO05D009111 2.8e-35 151.8 96 75.0
Thecc.08G063800 Theobroma cacao HOM05D001775 ORTHO05D009111 3.7e-35 151.4 95 74.7
Manes.05G125700 Manihot esculenta HOM05D001775 ORTHO05D009111 4.8e-35 151.0 95 74.7
TPR.G38162 Trifolium pratense HOM05D001775 ORTHO05D009111 4.8e-35 151.0 96 74.0
GSVIVG01013409001 Vitis vinifera HOM05D001775 ORTHO05D009111 6.3e-35 150.6 96 74.0
Ca_29626_v3 Cicer arietinum L. HOM05D002588 ORTHO05D002979 1.1e-34 149.8 96 71.9
Duzib116G0437 Durio zibethinus HOM05D001775 ORTHO05D009111 1.1e-34 149.8 95 72.6
Migut.C00375 Erythranthe guttata HOM05D001775 ORTHO05D009111 1.1e-34 149.8 95 73.7
MD06G1005700 Malus domestica HOM05D001775 ORTHO05D009111 1.1e-34 149.8 95 73.7
Psat5g008920 Pisum sativum HOM05D001775 ORTHO05D009111 1.1e-34 149.8 96 72.9
Cc10_g00360 Coffea canephora HOM05D001775 ORTHO05D009111 1.4e-34 149.4 95 74.7
VMungo1309G0131 Vigna mungo HOM05D001775 ORTHO05D009111 1.4e-34 149.4 95 73.7
EL10Ac1g01883 Beta vulgaris HOM05D001775 ORTHO05D009111 1.8e-34 149.1 95 73.7
Glyma.04G015400 Glycine max HOM05D001775 ORTHO05D009111 1.8e-34 149.1 95 73.7
Lj1g0018680 Lotus japonicus HOM05D001775 ORTHO05D009111 1.8e-34 149.1 96 69.8
Nn5g27670 Nelumbo nucifera HOM05D001775 ORTHO05D009111 3.1e-34 148.3 95 73.7
Phvul.009G007100 Phaseolus vulgaris HOM05D001775 ORTHO05D009111 3.1e-34 148.3 95 72.6
RcHm_v2.0_Chr7g0216351 Rosa chinensis HOM05D001775 ORTHO05D009111 3.1e-34 148.3 96 75.0
Hund05086 Selenicereus undatus HOM05D001775 ORTHO05D009111 3.1e-34 148.3 95 75.8
CSS0014569 Camellia sinensis var. sinensis HOM05D001775 ORTHO05D009111 4.1e-34 147.9 95 71.6
Cfa014122 Carpinus fangiana HOM05D001775 ORTHO05D009111 4.1e-34 147.9 109 67.9
FvH4_5g25880 Fragaria vesca HOM05D001775 ORTHO05D009111 4.1e-34 147.9 95 73.7
Potri.005G254900 Populus trichocarpa HOM05D001775 ORTHO05D009111 4.1e-34 147.9 95 74.7
Aqoxy5G00975 Aquilegia oxysepala HOM05D001775 ORTHO05D009111 5.3e-34 147.5 95 71.6
ClCG11G018910 Citrullus lanatus HOM05D001775 ORTHO05D009111 5.3e-34 147.5 110 67.3
Lalb_Chr11g0061421 Lupinus albus HOM05D001775 ORTHO05D009111 5.3e-34 147.5 96 69.8
CDE04G0169 Ceratophyllum demersum HOM05D001775 ORTHO05D009111 1.5e-33 146.0 95 71.6
Prupe.5G007000 Prunus persica HOM05D001775 ORTHO05D009111 1.5e-33 146.0 96 74.0
FAN13G0876 Fragaria x ananassa HOM05D001775 ORTHO05D009111 2.6e-33 145.2 96 74.0
Hma1.2p1_0612F.1_g188980 Hydrangea macrophylla HOM05D001775 ORTHO05D009111 3.4e-33 144.8 95 70.5
Oeu016875.3 Olea europaea HOM05D001775 ORTHO05D009111 3.4e-33 144.8 91 76.9
Lsat_1_v5_gn_2_1300 Lactuca sativa HOM05D001775 ORTHO05D009111 5.9e-33 144.1 96 71.9
Os02g0117600 Oryza sativa ssp. japonica HOM05D001775 ORTHO05D009111 1.3e-32 142.9 97 69.1
FAN08G0029 Fragaria x ananassa HOM05D001775 ORTHO05D009111 1.7e-32 142.5 96 72.9
AUR62035158 Chenopodium quinoa HOM05D001775 ORTHO05D009111 2.2e-32 142.1 109 65.1
Atru.chr13.83 Acer truncatum HOM05D001775 ORTHO05D009111 5.0e-32 141.0 95 71.6
Zm00001eb209360 Zea mays HOM05D001775 ORTHO05D009111 1.1e-31 139.8 95 68.4
ATR0807G105 Amborella trichopoda HOM05D001775 ORTHO05D009111 1.9e-31 139.0 96 68.8
vmacro04420 Vaccinium macrocarpon HOM05D001775 ORTHO05D009111 1.9e-31 139.0 89 74.2
ECA238G3840 Erigeron canadensis HOM05D001775 ORTHO05D009111 3.2e-31 138.3 96 65.6
Rhsim07G0257200 Rhododendron simsii HOM05D001775 ORTHO05D009111 3.2e-31 138.3 89 73.0
SGA_v2.0_scaffold133G34596 Striga asiatica HOM05D001775 ORTHO05D009111 3.2e-31 138.3 89 73.0
PSO170G2582 Papaver somniferum HOM05D001775 ORTHO05D009111 4.2e-31 137.9 95 67.4
HanXRQChr06g0185251 Helianthus annuus HOM05D001775 ORTHO05D009111 5.5e-31 137.5 96 66.7
SEGI_26708 Sequoiadendron giganteum HOM05D001775 ORTHO05D009111 5.5e-31 137.5 95 65.3
MBI05_g05759_MAGBIO Magnolia biondii HOM05D001775 ORTHO05D009111 2.1e-30 135.6 95 66.3
PSO210G1579 Papaver somniferum HOM05D001775 ORTHO05D009111 4.7e-30 134.4 96 67.7
SMO347G0534 Selaginella moellendorffii HOM05D001775 ORTHO05D009111 1.8e-29 132.5 97 64.9
QL01p024803 Quercus lobata HOM05D001775 ORTHO05D009111 2.3e-29 132.1 86 72.1
Sabra05G0197400 Salix brachista HOM05D001775 ORTHO05D009111 3.9e-29 131.3 95 69.5
TAR376G0612 Trochodendron aralioides HOM05D001775 ORTHO05D009111 6.7e-29 130.6 89 74.2
Pp3c25_1450 Physcomitrium patens HOM05D001775 ORTHO05D009111 2.6e-28 128.6 91 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2743 Anthoceros agrestis HOM05D001775 ORTHO05D009111 2.0e-25 119.0 95 57.9
DCAR_016791 Daucus carota HOM05D000190 ORTHO05D000113 2.1e-22 109.0 63 81.0
FAN04G3097 Fragaria x ananassa HOM05D001775 ORTHO05D009111 6.1e-22 107.5 119 50.4
SEGI_27526 Sequoiadendron giganteum HOM05D001775 ORTHO05D009111 8.0e-22 107.1 77 63.6
Eucgr.F01800 Eucalyptus grandis HOM05D001775 ORTHO05D009111 6.7e-21 104.0 75 69.3
Oeu019571.1 Olea europaea HOM05D001775 ORTHO05D009111 4.8e-19 97.8 76 65.8
Eucgr.F01795 Eucalyptus grandis HOM05D001775 ORTHO05D009111 2.4e-18 95.5 66 69.7
Cre10.g466850 Chlamydomonas reinhardtii HOM05D001775 ORTHO05D009111 1.8e-10 69.3 97 36.1
HPP92_015207 Vanilla planifolia HOM05D001775 ORTHO05D009111 3.1e-10 68.6 72 50.0
TPR.G35796 Trifolium pratense HOM05D001775 ORTHO05D009111 5.9e-09 64.3 33 87.9
MCO01G739 Micromonas commoda HOM05D001775 ORTHO05D009111 3.8e-08 61.6 69 39.1


User provided reference genes

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