Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p28900 Brassica napus HOM05D006408 ORTHO05D008038 6.8e-41 170.2 87 100.0
Sp1g19130 Schrenkiella parvula HOM05D006408 ORTHO05D008038 1.3e-15 86.3 55 85.5
CARHR021960 Cardamine hirsuta HOM05D006408 ORTHO05D008038 8.4e-15 83.6 55 83.6
Thhalv10007813m.g Eutrema salsugineum HOM05D006408 ORTHO05D008038 9.2e-14 80.1 55 83.6
Aa31LG7G5580 Aethionema arabicum HOM05D006408 ORTHO05D008038 6.0e-13 77.4 54 77.8
THA.LOC104814021 Tarenaya hassleriana HOM05D006408 ORTHO05D008038 1.6e-10 69.3 53 69.8
Dinv14691 Davidia involucrata HOM05D006408 ORTHO05D008038 2.8e-10 68.6 52 73.1
AL1G34740 Arabidopsis lyrata HOM05D006408 ORTHO05D008038 8.1e-10 67.0 54 66.7
RcHm_v2.0_Chr6g0296711 Rosa chinensis HOM05D006408 ORTHO05D008038 5.3e-09 64.3 60 60.0
Cfa018129 Carpinus fangiana HOM05D006408 ORTHO05D008038 6.9e-09 63.9 55 60.0
Cpa.g.sc26.317 Carica papaya HOM05D006408 ORTHO05D008038 1.5e-08 62.8 52 63.5
CiPaw.16G022700 Carya illinoinensis HOM05D006408 ORTHO05D008038 2.0e-08 62.4 49 61.2
CANSAT25G1301 Cannabis sativa HOM05D006408 ORTHO05D008038 2.6e-08 62.0 50 64.0
Gorai.005G087700 Gossypium raimondii HOM05D006408 ORTHO05D008038 4.4e-08 61.2 44 70.5
A06p17690 Brassica napus HOM05D006408 ORTHO05D008038 5.8e-08 60.8 39 79.5
C05p20590 Brassica napus HOM05D006408 ORTHO05D008038 5.8e-08 60.8 39 79.5
BolC5t30757H Brassica oleracea HOM05D006408 ORTHO05D008038 5.8e-08 60.8 39 79.5
BraA06t24861Z Brassica rapa HOM05D006408 ORTHO05D008038 5.8e-08 60.8 39 79.5
Thecc.08G133100 Theobroma cacao HOM05D006408 ORTHO05D008038 9.9e-08 60.1 39 71.8
TAR628G0457 Trochodendron aralioides HOM05D006408 ORTHO05D008038 1.3e-07 59.7 64 54.7
PSO170G2303 Papaver somniferum HOM05D006408 ORTHO05D008038 2.9e-07 58.5 53 58.5
PGR083G0137 Punica granatum HOM05D006408 ORTHO05D008038 3.8e-07 58.2 40 70.0
ClCG11G015980 Citrullus lanatus HOM05D006408 ORTHO05D008038 4.9e-07 57.8 64 53.1
MELO3C010512.2 Cucumis melo HOM05D006408 ORTHO05D008038 4.9e-07 57.8 64 53.1
CsaV3_4G028270 Cucumis sativus L. HOM05D006408 ORTHO05D008038 4.9e-07 57.8 64 53.1
Phvul.009G129900 Phaseolus vulgaris HOM05D006408 ORTHO05D008038 4.9e-07 57.8 48 56.2
Manes.02G168400 Manihot esculenta HOM05D006408 ORTHO05D008038 6.4e-07 57.4 56 57.1
PSO017G3385 Papaver somniferum HOM05D006408 ORTHO05D008038 6.4e-07 57.4 55 56.4
Glyma.06G117500 Glycine max HOM05D006408 ORTHO05D008038 8.4e-07 57.0 45 57.8
Potri.002G078900 Populus trichocarpa HOM05D006408 ORTHO05D008038 8.4e-07 57.0 50 62.0
Atru.chr13.1568 Acer truncatum HOM05D006408 ORTHO05D008038 1.1e-06 56.6 55 54.5
Aqoxy5G02393 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 2.4e-06 55.5 43 65.1
Prupe.1G489500 Prunus persica HOM05D006408 ORTHO05D008038 2.4e-06 55.5 44 65.9
MD08G1159400 Malus domestica HOM05D006408 ORTHO05D008038 3.2e-06 55.1 48 60.4
Glyma.04G087000 Glycine max HOM05D006408 ORTHO05D008038 4.2e-06 54.7 44 56.8


User provided reference genes

Program Settings