Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 2.3e-61 238.8 129 100.0
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 6.5e-56 220.7 122 97.5
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 6.5e-56 220.7 122 97.5
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 1.4e-55 219.5 122 97.5
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 5.2e-53 211.1 122 93.4
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 6.7e-53 210.7 122 92.6
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 1.1e-52 209.9 122 93.4
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 2.6e-52 208.8 122 92.6
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.1e-50 203.4 123 88.6
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.1e-50 203.4 122 88.5
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 1.4e-50 203.0 122 87.7
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 1.4e-50 203.0 122 88.5
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 3.1e-50 201.8 122 91.0
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 2.0e-49 199.1 121 91.7
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 2.0e-49 199.1 121 91.7
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 3.5e-49 198.4 123 87.0
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 3.5e-49 198.4 121 91.7
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 3.5e-49 198.4 121 91.7
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 4.5e-49 198.0 120 91.7
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 5.9e-49 197.6 122 86.1
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 1.0e-48 196.8 122 86.1
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 1.9e-47 192.6 122 84.4
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 3.6e-46 188.3 122 79.5
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 8.0e-46 187.2 122 80.3
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 3.0e-45 185.3 124 79.0
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 3.0e-45 185.3 122 77.9
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 5.2e-45 184.5 148 73.0
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 5.2e-45 184.5 120 80.8
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 8.8e-45 183.7 122 80.3
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 8.8e-45 183.7 122 78.7
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 1.2e-44 183.3 122 77.9
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.2e-44 183.3 122 77.9
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.0e-44 182.6 122 77.9
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 2.0e-44 182.6 122 79.5
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 2.0e-44 182.6 122 79.5
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 2.6e-44 182.2 120 80.0
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 3.3e-44 181.8 122 77.0
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 3.3e-44 181.8 122 77.0
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 3.3e-44 181.8 120 79.2
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 3.3e-44 181.8 122 78.7
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 4.4e-44 181.4 122 77.0
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 4.4e-44 181.4 123 76.4
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 5.7e-44 181.0 122 77.0
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 7.5e-44 180.6 124 75.0
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 7.5e-44 180.6 122 77.9
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 7.5e-44 180.6 122 77.0
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 9.7e-44 180.3 122 76.2
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 9.7e-44 180.3 120 80.0
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 9.7e-44 180.3 122 78.7
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.7e-43 179.5 122 77.9
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 1.7e-43 179.5 122 77.9
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 2.2e-43 179.1 122 77.0
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 2.2e-43 179.1 122 76.2
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 3.7e-43 178.3 122 77.0
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 3.7e-43 178.3 122 77.0
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 4.8e-43 177.9 122 75.4
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 6.3e-43 177.6 122 77.0
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 8.2e-43 177.2 122 76.2
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 8.2e-43 177.2 120 76.7
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 8.2e-43 177.2 120 79.2
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.4e-42 176.4 122 74.6
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.8e-42 176.0 123 74.0
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 2.4e-42 175.6 121 76.0
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 3.1e-42 175.3 122 75.4
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 3.1e-42 175.3 120 75.8
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 4.1e-42 174.9 120 75.8
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 5.3e-42 174.5 120 76.7
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 5.3e-42 174.5 122 75.4
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 5.3e-42 174.5 122 73.8
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 5.3e-42 174.5 122 76.2
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 7.0e-42 174.1 122 73.8
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 7.0e-42 174.1 120 75.8
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 9.1e-42 173.7 123 74.8
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 9.1e-42 173.7 120 75.0
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 1.2e-41 173.3 122 75.4
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 1.2e-41 173.3 122 73.8
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 1.6e-41 172.9 120 75.0
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 2.0e-41 172.6 120 75.0
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 2.7e-41 172.2 122 73.8
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 4.5e-41 171.4 122 74.6
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 7.7e-41 170.6 122 71.3
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 1.0e-40 170.2 120 73.3
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 1.3e-40 169.9 121 72.7
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 2.2e-40 169.1 122 72.1
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 2.2e-40 169.1 122 72.1
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 2.9e-40 168.7 120 73.3
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 8.5e-40 167.2 122 70.5
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 8.5e-40 167.2 125 72.0
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 8.5e-40 167.2 125 72.0
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 1.5e-39 166.4 122 70.5
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.9e-39 166.0 122 69.7
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.5e-39 165.6 122 73.0
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 2.5e-39 165.6 115 75.7
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 7.2e-39 164.1 122 70.5
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 9.4e-39 163.7 122 74.6
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 2.1e-38 162.5 122 68.0
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 2.7e-38 162.2 120 72.5
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 3.6e-38 161.8 120 70.8
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 8.0e-38 160.6 174 54.6
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 8.0e-38 160.6 122 71.3
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 1.0e-37 160.2 122 73.8
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 1.0e-37 160.2 118 68.6
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 3.0e-37 158.7 109 76.1
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 2.0e-36 156.0 139 66.2
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 3.7e-35 151.8 127 73.2
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 4.8e-35 151.4 122 65.6
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 4.5e-33 144.8 122 63.9
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 2.3e-32 142.5 131 61.1
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 1.2e-30 136.7 93 78.5
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 2.1e-30 136.0 115 61.7
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 2.8e-30 135.6 119 60.5
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 8.0e-30 134.0 92 76.1
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.0e-29 133.7 91 76.9
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.2e-28 130.2 91 76.9
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.2e-28 130.2 94 74.5
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 2.0e-28 129.4 103 66.0
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 3.7e-27 125.2 101 65.3
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 8.0e-22 107.5 69 82.6
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 1.1e-18 97.1 70 70.0
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 1.2e-17 93.6 115 45.2
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.2e-14 83.6 58 81.0
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 2.1e-14 82.8 60 78.3
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.9e-11 72.4 46 78.3
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 8.3e-11 70.9 56 71.4
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 2.0e-09 66.2 51 64.7
BcaC05g26083 Brassica carinata HOM05D006317 ORTHO05D007852 8.6e-08 60.8 50 74.0


User provided reference genes

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