Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p28330 Brassica napus HOM05D008965 ORTHO05D027579 8.6e-51 203.4 103 100.0
C08p21750 Brassica napus HOM05D008965 ORTHO05D027579 9.2e-37 156.8 94 88.3
BcaB03g11925 Brassica carinata HOM05D008965 ORTHO05D011533 1.9e-26 122.5 95 66.3
BcaC07g39185 Brassica carinata HOM05D008965 ORTHO05D027579 4.6e-20 101.3 65 86.2
BolC8t49813H Brassica oleracea HOM05D008965 ORTHO05D027579 4.6e-20 101.3 65 86.2
BcaC05g30176 Brassica carinata HOM05D008965 ORTHO05D011533 1.4e-13 79.7 86 46.5
AL1G36810 Arabidopsis lyrata HOM05D008965 ORTHO05D031329 2.3e-11 72.4 103 39.8
A05p42830 Brassica napus HOM05D008965 ORTHO05D011533 3.9e-11 71.6 77 45.5
BcaC05g30175 Brassica carinata HOM05D008965 ORTHO05D011533 6.6e-11 70.9 85 45.9
Thhalv10022213m.g Eutrema salsugineum HOM05D008965 ORTHO05D011533 6.6e-11 70.9 87 43.7
BcaC05g29912 Brassica carinata HOM05D008965 ORTHO05D011533 1.5e-10 69.7 77 48.1
BcaC05g29913 Brassica carinata HOM05D008965 ORTHO05D011533 1.5e-10 69.7 77 48.1
C05p62550 Brassica napus HOM05D008965 ORTHO05D011533 1.5e-10 69.7 77 48.1
BolC5t34910H Brassica oleracea HOM05D008965 ORTHO05D011533 1.5e-10 69.7 77 48.1
AT3G04735 Arabidopsis thaliana HOM05D008965 ORTHO05D011533 1.9e-10 69.3 87 46.0
BraA05t22969Z Brassica rapa HOM05D008965 ORTHO05D011533 1.6e-09 66.2 88 44.3
BcaC05g29914 Brassica carinata HOM05D008965 ORTHO05D011533 2.1e-09 65.9 84 46.4
C05p62560 Brassica napus HOM05D008965 ORTHO05D011533 2.1e-09 65.9 84 46.4
AT1G23145 Arabidopsis thaliana HOM05D008965 ORTHO05D031329 3.6e-09 65.1 98 41.8
A05p42840 Brassica napus HOM05D008965 ORTHO05D011533 4.8e-09 64.7 86 44.2
BolC5t34911H Brassica oleracea HOM05D008965 ORTHO05D011533 1.4e-08 63.2 84 45.2
AT4G11510 Arabidopsis thaliana HOM05D008965 ORTHO05D011533 3.1e-08 62.0 87 41.4
AT1G23147 Arabidopsis thaliana HOM05D008965 ORTHO05D011533 5.3e-08 61.2 89 41.6
C09p50450 Brassica napus HOM05D008965 ORTHO05D011533 5.3e-08 61.2 84 44.0
BolC9t57902H Brassica oleracea HOM05D008965 ORTHO05D011533 5.3e-08 61.2 84 44.0
Carub.0001s2269 Capsella rubella HOM05D008965 ORTHO05D031329 1.2e-07 60.1 88 40.9
AL3G14860 Arabidopsis lyrata HOM05D008965 ORTHO05D011533 2.0e-07 59.3 79 43.0
AL6G46040 Arabidopsis lyrata HOM05D008965 ORTHO05D011533 2.0e-07 59.3 81 42.0


User provided reference genes

Program Settings