Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.7e-155 552.7 296 100.0
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 4.8e-155 551.2 296 99.7
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 8.9e-117 424.1 279 86.4
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.3e-112 409.5 303 79.2
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 3.0e-112 409.1 279 84.2
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 8.1e-110 401.0 292 80.1
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 8.3e-107 391.0 280 82.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.1e-106 390.6 280 82.5
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 5.4e-106 388.3 287 80.1
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 1.5e-92 343.6 261 76.6
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.6e-81 307.0 286 66.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.1e-71 274.2 204 78.4
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.9e-66 256.9 174 75.9
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 4.6e-65 252.3 197 69.0
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 6.0e-65 251.9 260 57.7
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.0e-64 251.1 194 68.0
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.3e-64 250.8 229 62.9
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.3e-64 250.0 267 55.4
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.0e-64 249.6 177 72.9
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.9e-64 249.2 177 72.9
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.1e-63 247.7 195 67.7
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.1e-63 247.7 256 58.2
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.1e-63 247.7 262 55.7
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 3.3e-63 246.1 287 51.9
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.3e-63 246.1 288 52.8
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 7.4e-63 245.0 177 72.3
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.3e-62 244.2 287 52.3
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.1e-62 243.4 213 62.9
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 2.1e-62 243.4 252 56.7
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 4.8e-62 242.3 262 57.6
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.1e-61 241.1 268 54.1
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.1e-61 241.1 221 60.2
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 3.1e-61 239.6 271 56.1
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 3.1e-61 239.6 245 58.0
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.1e-61 239.2 192 66.1
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 4.1e-61 239.2 259 57.9
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 6.9e-61 238.4 195 64.6
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 6.9e-61 238.4 281 51.2
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.9e-61 238.4 224 59.4
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.9e-61 238.4 250 55.2
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.2e-60 237.7 232 57.8
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.2e-60 237.7 265 55.1
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.5e-60 237.3 195 63.6
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.6e-60 236.5 231 58.4
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 2.6e-60 236.5 263 55.5
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 3.4e-60 236.1 272 52.9
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 3.4e-60 236.1 220 60.5
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 4.5e-60 235.7 231 58.4
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 4.5e-60 235.7 235 60.0
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 5.9e-60 235.3 265 55.8
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 7.6e-60 235.0 288 52.1
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 2.9e-59 233.0 264 52.7
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 3.8e-59 232.6 250 55.6
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 3.8e-59 232.6 230 57.8
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 5.0e-59 232.3 264 52.3
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 5.0e-59 232.3 232 59.1
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 8.5e-59 231.5 281 51.2
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 8.5e-59 231.5 215 59.5
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.9e-58 230.3 194 63.4
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 3.2e-58 229.6 270 54.4
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 7.2e-58 228.4 236 56.4
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 7.2e-58 228.4 220 58.2
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.3e-58 228.0 237 57.0
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 9.3e-58 228.0 156 73.1
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.6e-57 226.1 237 57.0
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.8e-56 223.8 283 51.2
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.8e-56 223.8 241 56.0
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 3.0e-56 223.0 207 59.9
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 3.9e-56 222.6 241 56.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 8.7e-56 221.5 216 57.4
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.1e-55 221.1 170 67.6
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.5e-55 220.7 266 49.6
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.5e-55 219.9 233 55.4
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 4.3e-55 219.2 265 50.9
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.7e-55 218.8 241 56.0
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 7.4e-55 218.4 260 51.2
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 3.7e-54 216.1 256 53.9
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.4e-53 214.2 237 54.0
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.1e-53 213.0 200 60.0
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.6e-52 209.9 192 56.8
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.1e-50 204.5 210 52.4
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 3.2e-50 203.0 215 56.7
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 4.2e-50 202.6 278 48.9
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.2e-50 201.8 283 47.7
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 7.2e-50 201.8 198 52.5
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 7.2e-50 201.8 173 60.1
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 9.4e-50 201.4 189 62.4
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.1e-49 200.3 268 45.9
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.7e-49 199.9 206 51.0
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 4.6e-49 199.1 138 71.0
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 1.8e-48 197.2 251 51.0
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.8e-48 197.2 205 56.6
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.3e-46 191.0 192 56.2
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.7e-46 190.7 252 52.4
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.8e-46 189.9 195 56.4
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.1e-45 188.0 149 64.4
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.1e-45 188.0 254 52.0
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 5.3e-45 185.7 305 45.2
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 3.4e-44 183.0 278 46.0
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 4.2e-42 176.0 303 44.6
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 6.1e-41 172.2 264 46.6
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.1e-39 167.9 249 46.2
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 2.6e-39 166.8 205 52.2
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 2.8e-38 163.3 209 44.5
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 3.7e-38 162.9 187 48.1
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 5.9e-36 155.6 282 42.9
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 4.7e-33 146.0 155 56.1
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.2e-31 141.4 186 51.6
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 2.0e-31 140.6 168 56.0
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 4.4e-31 139.4 251 41.8
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 5.0e-27 125.9 105 71.4
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.0e-24 118.2 132 45.5
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 7.0e-21 105.5 204 34.3
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.0e-20 104.0 152 34.9
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 5.9e-20 102.4 127 51.2
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.6e-17 93.2 237 35.4
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 4.9e-14 82.8 72 59.7
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 4.5e-12 76.3 83 51.8
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 7.8e-12 75.5 153 31.4
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 5.6e-10 69.3 55 60.0
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 6.1e-09 65.9 69 52.2


User provided reference genes

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