Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p26400 Brassica napus HOM05D055687 ORTHO05D003127 9.9e-52 206.5 101 100.0
BraA08t34591Z Brassica rapa HOM05D055687 ORTHO05D003127 9.9e-52 206.5 101 100.0
BcaB03g12073 Brassica carinata HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BcaC01g01622 Brassica carinata HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BcaC05g26548 Brassica carinata HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BcaC05g26738 Brassica carinata HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BcaC05g26741 Brassica carinata HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
A07p11910 Brassica napus HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
A08p26410 Brassica napus HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
A09p38600 Brassica napus HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
A09p38620 Brassica napus HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
C03p73670 Brassica napus HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
C05p26030 Brassica napus HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
C05p26050 Brassica napus HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
C07p17860 Brassica napus HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BolC5t31322H Brassica oleracea HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BolC5t31324H Brassica oleracea HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BolC7t42292H Brassica oleracea HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BraA08t34592Z Brassica rapa HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BraA09t39365Z Brassica rapa HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
BraA09t39367Z Brassica rapa HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
Thhalv10009274m.g Eutrema salsugineum HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
Thhalv10009276m.g Eutrema salsugineum HOM05D002882 ORTHO05D003127 4.4e-07 58.2 59 55.9
AL1G40730 Arabidopsis lyrata HOM05D002882 ORTHO05D003127 2.2e-06 55.8 59 54.2
AL1G40750 Arabidopsis lyrata HOM05D002882 ORTHO05D003127 2.2e-06 55.8 59 54.2
AT1G27330 Arabidopsis thaliana HOM05D002882 ORTHO05D003127 2.2e-06 55.8 59 54.2
AT1G27350 Arabidopsis thaliana HOM05D002882 ORTHO05D003127 2.2e-06 55.8 59 54.2
C07p17880 Brassica napus HOM05D002882 ORTHO05D003127 2.2e-06 55.8 59 54.2
Carub.0001s2586 Capsella rubella HOM05D002882 ORTHO05D003127 2.2e-06 55.8 59 54.2
Carub.0001s2588 Capsella rubella HOM05D002882 ORTHO05D003127 2.2e-06 55.8 59 54.2
CARHR026930 Cardamine hirsuta HOM05D002882 ORTHO05D003127 2.2e-06 55.8 59 54.2
Glyma.05G148000 Glycine max HOM05D002882 ORTHO05D003127 2.2e-06 55.8 59 54.2
BolC3t19658H Brassica oleracea HOM05D002882 ORTHO05D003127 2.8e-06 55.5 59 54.2
Lj4g0011609 Lotus japonicus HOM05D002882 ORTHO05D003127 2.8e-06 55.5 59 54.2
Aqoxy5G03331 Aquilegia oxysepala HOM05D002882 ORTHO05D003127 3.7e-06 55.1 59 54.2
Actinidia09644 Actinidia chinensis HOM05D002882 ORTHO05D003127 6.3e-06 54.3 59 54.2
arahy.Tifrunner.gnm1.ann1.CG2Z4D Arachis hypogaea HOM05D002882 ORTHO05D003127 6.3e-06 54.3 59 52.5
arahy.Tifrunner.gnm1.ann1.ZB5YIW Arachis hypogaea HOM05D002882 ORTHO05D003127 6.3e-06 54.3 59 52.5
Manes.13G010602 Manihot esculenta HOM05D002882 ORTHO05D003127 8.2e-06 53.9 59 54.2
THA.LOC104807127 Tarenaya hassleriana HOM05D002882 ORTHO05D003127 8.2e-06 53.9 59 54.2
THA.LOC104807522 Tarenaya hassleriana HOM05D002882 ORTHO05D003127 8.2e-06 53.9 59 54.2
THA.LOC109116983 Tarenaya hassleriana HOM05D002882 ORTHO05D003127 8.2e-06 53.9 59 54.2
Thecc.02G206200 Theobroma cacao HOM05D002882 ORTHO05D003127 8.2e-06 53.9 59 54.2
GSVIVG01010500001 Vitis vinifera HOM05D000160 ORTHO05D000496 8.2e-06 53.9 59 54.2


User provided reference genes

Program Settings