Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 5.5e-198 694.1 352 100.0
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 3.3e-195 684.9 352 97.4
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 2.3e-188 662.1 355 95.2
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 6.7e-188 660.6 355 94.6
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.3e-186 656.4 355 94.4
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 2.1e-181 639.0 354 92.7
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.5e-176 622.9 343 91.8
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 2.6e-171 605.5 355 87.0
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 4.1e-169 598.2 355 85.6
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 3.6e-165 585.1 355 84.5
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.6e-160 569.7 355 82.3
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.8e-148 529.6 339 79.6
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.2e-141 506.9 355 76.9
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 1.4e-137 493.4 344 72.4
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.1e-126 457.2 323 70.9
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 5.6e-126 454.9 341 67.7
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 9.5e-126 454.1 330 69.1
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 6.2e-125 451.4 313 71.6
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 8.1e-125 451.1 338 67.5
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.4e-124 450.3 331 67.7
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.8e-124 449.9 338 67.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 2.3e-124 449.5 341 66.0
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 3.4e-123 445.7 340 65.9
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 4.4e-123 445.3 331 67.1
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.3e-122 443.7 349 65.9
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.3e-122 443.7 294 72.4
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.7e-122 443.4 339 66.4
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.2e-122 443.0 342 65.5
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.2e-122 443.0 348 65.8
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 2.9e-122 442.6 346 64.5
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.9e-122 442.6 328 68.9
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.7e-122 442.2 342 65.8
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.4e-122 441.4 339 66.1
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.4e-121 440.3 338 66.0
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.4e-121 440.3 342 65.5
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 2.4e-121 439.5 316 69.0
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.2e-121 439.1 337 65.6
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 3.2e-121 439.1 322 68.6
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.2e-121 439.1 343 66.2
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 3.2e-121 439.1 284 72.5
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 4.1e-121 438.7 337 65.6
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 4.1e-121 438.7 377 61.8
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 5.4e-121 438.3 282 72.7
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 5.4e-121 438.3 342 65.2
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 9.2e-121 437.6 293 74.7
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 9.2e-121 437.6 284 72.5
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 1.2e-120 437.2 309 70.6
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 2.1e-120 436.4 342 65.2
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 4.6e-120 435.3 328 67.7
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 4.6e-120 435.3 332 66.3
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 7.8e-120 434.5 312 68.3
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 7.8e-120 434.5 321 68.8
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.7e-119 433.3 287 70.4
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 2.3e-119 433.0 315 68.3
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 2.3e-119 433.0 337 65.0
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 5.1e-119 431.8 352 64.2
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 5.1e-119 431.8 310 69.7
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 7.3e-118 427.9 298 69.1
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.2e-117 427.2 302 68.5
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.2e-117 427.2 311 67.8
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.1e-116 424.1 340 64.1
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.8e-116 423.3 283 69.6
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 5.2e-116 421.8 312 66.3
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 8.9e-116 421.0 305 67.5
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.2e-115 420.6 325 62.2
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.2e-115 420.6 337 63.5
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.5e-115 420.2 316 66.5
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.6e-115 419.5 313 68.4
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 2.6e-115 419.5 315 65.1
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.6e-115 419.5 265 72.8
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 4.4e-115 418.7 292 68.8
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 5.8e-115 418.3 342 61.1
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 5.8e-115 418.3 294 71.1
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.9e-114 416.0 256 75.0
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 2.9e-114 416.0 313 65.5
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 4.2e-113 412.1 281 70.8
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.2e-112 410.6 337 63.2
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 2.7e-112 409.5 319 64.6
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 6.0e-112 408.3 301 66.8
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 2.3e-111 406.4 387 57.1
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 3.9e-111 405.6 342 61.4
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.9e-110 403.3 293 68.9
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 6.2e-109 398.3 331 60.1
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 8.1e-109 397.9 285 68.1
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 5.3e-108 395.2 297 68.4
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.3e-106 390.6 339 60.2
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.4e-105 386.3 411 50.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 7.1e-105 384.8 279 65.6
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 9.3e-105 384.4 278 65.8
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 2.5e-102 376.3 310 59.7
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 2.2e-98 363.2 315 59.7
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.0e-95 354.4 229 72.1
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 9.0e-92 341.3 318 53.1
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.2e-91 340.9 270 58.5
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 3.3e-86 322.8 320 54.4
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.3e-85 320.9 275 59.3
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 8.2e-85 318.2 266 55.3
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.6e-83 313.2 300 58.0
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 5.9e-83 312.0 237 59.5
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 8.4e-82 308.1 279 58.1
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 3.2e-81 306.2 320 52.8
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 4.3e-70 269.2 154 76.0
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 1.7e-69 267.3 217 62.2
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 3.1e-60 236.5 153 72.5
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 2.7e-56 223.4 267 45.7
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.0e-54 217.2 134 75.4
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 4.4e-54 216.1 134 73.9
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 6.3e-53 212.2 135 72.6
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.9e-50 203.4 281 43.1
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.4e-44 184.5 136 60.3
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 9.8e-38 161.8 97 76.3
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 9.5e-33 145.2 282 33.7
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.6e-32 144.4 254 34.3
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 6.1e-32 142.5 293 34.1
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.1e-24 117.5 99 65.7
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.8e-15 87.8 135 39.3
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.8e-08 63.9 52 51.9


User provided reference genes

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