Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 8.3e-143 510.4 261 100.0
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 3.2e-142 508.4 261 99.6
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 8.6e-140 500.4 276 94.6
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 4.3e-139 498.0 263 98.5
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 4.0e-137 491.5 277 93.1
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 1.9e-134 482.6 263 95.4
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.4e-126 456.4 267 87.6
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.4e-126 456.4 268 89.9
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 3.5e-125 451.8 267 88.4
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 3.9e-124 448.4 268 86.6
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 1.1e-121 440.3 266 86.1
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 4.2e-118 428.3 301 75.4
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 7.1e-118 427.6 263 83.3
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 7.9e-109 397.5 263 83.3
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 3.0e-100 369.0 263 68.8
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 1.1e-99 367.1 264 69.7
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 4.3e-99 365.2 264 68.2
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 5.6e-99 364.8 266 68.4
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 7.4e-99 364.4 266 67.3
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 9.6e-99 364.0 266 69.9
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 8.1e-98 360.9 265 67.9
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 8.1e-98 360.9 266 68.4
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 4.0e-97 358.6 266 66.5
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 6.9e-97 357.8 262 67.9
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 9.0e-97 357.5 266 68.0
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.4e-96 355.5 260 68.8
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 4.5e-96 355.1 263 67.3
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 4.5e-96 355.1 266 66.9
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 5.8e-96 354.8 261 67.0
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 7.6e-96 354.4 264 66.7
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 1.0e-95 354.0 263 67.7
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 1.0e-95 354.0 262 67.6
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 1.0e-95 354.0 266 66.9
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 1.0e-95 354.0 267 66.3
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 1.3e-95 353.6 258 68.6
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.7e-95 353.2 267 64.0
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 2.2e-95 352.8 266 66.5
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 2.2e-95 352.8 266 66.5
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 2.9e-95 352.4 266 66.5
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 3.8e-95 352.1 266 66.9
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 8.4e-95 350.9 266 66.5
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 1.1e-94 350.5 254 68.9
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 1.4e-94 350.1 237 75.1
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.9e-94 349.7 266 65.0
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 1.9e-94 349.7 266 66.2
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 3.2e-94 349.0 266 65.8
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 5.5e-94 348.2 263 68.1
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 7.1e-94 347.8 267 65.5
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 9.3e-94 347.4 266 66.2
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 1.2e-93 347.1 267 64.8
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 1.2e-93 347.1 267 64.8
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 2.1e-93 346.3 267 65.2
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 2.1e-93 346.3 245 68.6
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 2.1e-93 346.3 267 65.5
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 2.7e-93 345.9 263 64.3
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 2.7e-93 345.9 245 68.6
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 4.6e-93 345.1 286 64.0
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 4.6e-93 345.1 269 65.1
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 6.0e-93 344.7 251 70.5
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 1.3e-92 343.6 244 68.4
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 1.8e-92 343.2 246 67.5
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.8e-92 343.2 258 68.6
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 1.8e-92 343.2 248 66.9
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 2.3e-92 342.8 249 66.7
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 2.3e-92 342.8 246 67.5
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 3.0e-92 342.4 249 69.1
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 1.1e-91 340.5 243 67.5
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.9e-91 339.7 268 65.3
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 3.3e-91 339.0 255 63.1
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 4.3e-91 338.6 303 59.1
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 4.3e-91 338.6 250 66.0
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 7.4e-91 337.8 267 61.8
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 7.4e-91 337.8 257 65.0
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 9.6e-91 337.4 267 61.8
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 2.1e-90 336.3 228 71.9
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 3.7e-90 335.5 255 62.4
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 3.7e-90 335.5 244 66.8
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 3.7e-90 335.5 244 67.6
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 4.8e-90 335.1 255 63.5
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 4.8e-90 335.1 259 63.3
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 4.8e-90 335.1 267 61.4
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 6.3e-90 334.7 253 64.4
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 6.3e-90 334.7 258 62.0
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 1.1e-89 334.0 334 55.7
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 2.4e-89 332.8 249 65.1
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 3.1e-89 332.4 258 63.2
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 3.1e-89 332.4 245 65.3
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 4.1e-89 332.0 251 64.1
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 5.3e-89 331.6 267 61.0
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 5.3e-89 331.6 235 68.5
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 5.3e-89 331.6 228 70.6
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 1.5e-88 330.1 255 62.0
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 1.5e-88 330.1 243 67.1
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 1.5e-88 330.1 234 70.9
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 2.0e-88 329.7 246 65.9
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 2.6e-88 329.3 264 63.6
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 3.4e-88 328.9 258 61.6
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 4.5e-88 328.6 234 69.7
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 4.5e-88 328.6 244 67.2
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.9e-88 328.2 270 62.2
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 1.7e-87 326.6 254 65.0
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 1.7e-87 326.6 251 63.7
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 2.2e-87 326.2 243 65.0
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 5.0e-87 325.1 264 63.6
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.4e-86 323.6 264 62.9
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 5.5e-86 321.6 250 62.8
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 1.2e-85 320.5 241 65.1
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 2.7e-85 319.3 267 59.2
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 4.6e-85 318.5 246 65.0
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 7.9e-85 317.8 211 73.9
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 1.0e-84 317.4 347 51.3
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 1.0e-84 317.4 229 67.2
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 3.9e-84 315.5 251 62.2
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 3.3e-83 312.4 219 69.9
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 5.7e-83 311.6 246 64.2
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 1.2e-80 303.9 211 72.0
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 2.6e-80 302.8 211 70.1
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 2.6e-80 302.8 266 60.2
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 1.3e-79 300.4 211 69.7
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 6.5e-79 298.1 259 60.6
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 1.9e-78 296.6 246 61.0
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 1.9e-78 296.6 253 57.3
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 9.4e-78 294.3 262 58.4
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.3e-76 289.7 250 59.2
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 2.3e-76 289.7 210 67.6
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 2.5e-75 286.2 205 66.8
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 5.7e-75 285.0 252 58.7
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 1.1e-73 280.8 197 73.1
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 1.1e-73 280.8 275 56.7
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 3.1e-73 279.3 249 58.6
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 2.0e-72 276.6 238 57.6
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 3.8e-71 272.3 198 67.2
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 8.5e-71 271.2 265 53.2
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 7.9e-69 264.6 243 56.0
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 3.9e-68 262.3 243 55.6
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 6.7e-68 261.5 204 64.2
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 1.5e-67 260.4 266 53.8
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 7.4e-67 258.1 192 67.2
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 1.3e-66 257.3 252 52.4
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 4.8e-66 255.4 305 46.9
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 8.2e-66 254.6 250 52.8
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 1.6e-64 250.4 201 60.2
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 2.6e-64 249.6 185 64.3
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.0e-63 247.7 234 53.8
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 2.5e-62 243.0 252 50.8
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 3.3e-59 232.6 146 78.8
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 1.4e-57 227.3 259 49.0
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 5.0e-55 218.8 234 49.1
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 8.5e-55 218.0 208 56.2
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 1.2e-51 207.6 244 44.7
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 2.8e-50 203.0 139 70.5
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.7e-47 193.7 190 54.7
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.3e-44 183.3 166 58.4
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 7.5e-43 178.3 122 73.0
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 4.7e-37 159.1 118 74.6
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 4.7e-37 159.1 118 74.6
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 5.7e-35 152.1 105 71.4
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 3.2e-33 146.4 148 56.1
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.5e-32 142.9 100 70.0
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 5.9e-32 142.1 104 63.5
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 1.3e-31 141.0 240 37.5
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 1.2e-27 127.9 99 65.7
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 1.6e-21 107.5 82 68.3
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.1e-20 104.8 163 39.9
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 9.8e-19 98.2 166 38.6
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 1.1e-17 94.7 276 26.8
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 5.4e-17 92.4 139 40.3
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.7e-15 87.4 85 54.1
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 6.2e-13 79.0 68 55.9
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 2.4e-09 67.0 65 47.7
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.0e-07 61.6 69 47.8
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 6.6e-07 58.9 123 36.6


User provided reference genes

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