Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 1.9e-69 266.2 186 100.0
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 9.7e-69 263.8 186 94.6
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 6.1e-63 244.6 187 85.0
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 2.8e-60 235.7 188 82.4
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 2.8e-60 235.7 188 82.4
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 7.2e-56 221.1 178 77.0
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 2.7e-55 219.2 178 74.2
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 2.3e-54 216.1 178 74.2
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 2.3e-54 216.1 178 74.2
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 3.9e-54 215.3 178 71.9
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 6.7e-54 214.5 191 70.7
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 4.4e-53 211.8 179 69.8
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 4.2e-48 195.3 193 66.8
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 8.0e-47 191.0 192 67.2
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 4.4e-45 185.3 190 61.1
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 2.2e-44 183.0 196 65.8
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 4.8e-36 155.2 175 53.1
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 3.8e-25 119.0 187 57.2
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 1.5e-24 117.1 171 45.6
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 4.2e-24 115.5 167 47.9
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 5.5e-24 115.2 167 47.3
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 7.2e-24 114.8 179 43.6
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 9.5e-24 114.4 178 45.5
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 1.6e-23 113.6 169 44.4
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 2.1e-23 113.2 177 41.8
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 2.8e-23 112.8 180 42.2
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 4.7e-23 112.1 170 43.5
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 2.3e-22 109.8 169 51.5
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 3.0e-22 109.4 182 41.8
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 4.0e-22 109.0 169 43.2
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 4.0e-22 109.0 182 41.8
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 5.2e-22 108.6 168 44.6
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 5.2e-22 108.6 168 44.6
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 6.8e-22 108.2 179 42.5
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 1.2e-21 107.5 182 44.5
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 1.2e-21 107.5 181 42.0
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 1.5e-21 107.1 181 41.4
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.0e-21 106.7 179 47.5
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 2.6e-21 106.3 182 40.7
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 4.4e-21 105.5 174 42.5
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 4.4e-21 105.5 181 41.4
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 5.7e-21 105.1 179 42.5
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 7.5e-21 104.8 184 40.8
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 9.8e-21 104.4 179 42.5
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.3e-20 104.0 178 51.7
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 2.8e-20 102.8 176 51.7
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 2.8e-20 102.8 168 42.3
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 3.7e-20 102.4 178 42.1
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 4.9e-20 102.1 171 50.3
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 4.9e-20 102.1 176 42.6
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 4.9e-20 102.1 184 42.4
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 6.3e-20 101.7 173 41.6
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 8.3e-20 101.3 180 40.0
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 8.3e-20 101.3 180 41.1
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 1.1e-19 100.9 170 41.2
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.1e-19 100.9 179 45.8
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 1.4e-19 100.5 172 50.6
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 2.4e-19 99.8 183 40.4
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 2.4e-19 99.8 169 40.8
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 2.4e-19 99.8 168 43.5
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 3.1e-19 99.4 183 37.7
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 4.1e-19 99.0 180 38.3
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 7.0e-19 98.2 172 42.4
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 9.2e-19 97.8 181 40.9
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 9.2e-19 97.8 179 39.1
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 1.2e-18 97.4 169 42.6
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 1.6e-18 97.1 175 41.7
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 2.0e-18 96.7 168 48.8
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 2.7e-18 96.3 180 40.0
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 1.3e-17 94.0 181 38.7
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 2.9e-17 92.8 57 87.7
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 2.9e-17 92.8 169 40.2
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 3.9e-17 92.4 180 39.4
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 3.9e-17 92.4 173 39.9
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 5.0e-17 92.0 174 37.4
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 8.6e-17 91.3 168 49.4
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 1.5e-16 90.5 192 36.5
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 3.3e-16 89.4 181 37.0
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 1.2e-15 87.4 199 42.2
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 4.7e-15 85.5 171 38.0
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 6.1e-15 85.1 169 37.9
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 6.1e-15 85.1 170 43.5
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 1.0e-14 84.3 140 46.4
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 3.1e-14 82.8 178 41.6
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 4.0e-14 82.4 175 42.3
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.5e-13 80.5 168 48.8
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 1.5e-13 80.5 186 53.2
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 2.6e-13 79.7 185 42.2
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 3.4e-13 79.3 169 47.9
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 4.4e-13 79.0 144 45.1
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 4.4e-13 79.0 168 47.6
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 7.5e-13 78.2 171 35.7
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 1.3e-12 77.4 136 39.7
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 1.7e-12 77.0 143 36.4
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 2.2e-12 76.6 138 38.4
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 2.9e-12 76.3 163 35.6
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 2.9e-12 76.3 210 32.9
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 4.9e-12 75.5 175 36.6
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 8.3e-12 74.7 221 31.7
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 2.4e-11 73.2 178 33.7
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 4.6e-10 68.9 88 46.6
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.0e-09 67.8 138 36.2
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 2.5e-08 63.2 176 40.9
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 7.3e-08 61.6 171 38.0
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 6.2e-07 58.5 88 47.7
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 8.0e-07 58.2 88 46.6
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 5.2e-06 55.5 55 52.7


User provided reference genes

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