Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p21040 Brassica napus HOM05D008661 ORTHO05D010872 0.0e+00 1716.4 886 100.0
BraA08t34056Z Brassica rapa HOM05D008661 ORTHO05D010872 0.0e+00 1679.8 887 98.0
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 0.0e+00 1661.7 887 97.1
BcaC07g38204 Brassica carinata HOM05D008661 ORTHO05D010872 0.0e+00 1649.0 887 96.4
BolC8t48627H Brassica oleracea HOM05D008661 ORTHO05D010872 0.0e+00 1649.0 887 96.4
BcaB03g12479 Brassica carinata HOM05D008661 ORTHO05D010872 0.0e+00 1414.1 912 83.3
BcaB03g12481 Brassica carinata HOM05D008661 ORTHO05D010872 6.6e-309 1063.9 863 70.6
A08p21060 Brassica napus HOM05D008661 ORTHO05D010872 4.6e-286 988.0 529 97.5
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 1.1e-279 966.8 742 71.4
CARHR233070 Cardamine hirsuta HOM05D008661 ORTHO05D010872 1.1e-274 950.3 827 66.7
Carub.0007s1533 Capsella rubella HOM05D008661 ORTHO05D010872 2.6e-273 945.7 839 65.1
AL7G27440 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 1.7e-272 943.0 854 64.6
CARHR233080 Cardamine hirsuta HOM05D008661 ORTHO05D010872 4.5e-265 918.3 859 63.2
Carub.0238s0001 Capsella rubella HOM05D008661 ORTHO05D010872 1.5e-236 823.5 755 62.3
Thhalv10024596m.g Eutrema salsugineum HOM05D008661 ORTHO05D010872 3.0e-229 799.3 612 71.6
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 3.9e-200 702.6 871 53.8
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 1.9e-186 657.1 849 52.8
AL8G26990 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 2.1e-166 590.5 872 48.3
AT5G52530 Arabidopsis thaliana HOM05D008661 ORTHO05D010872 4.2e-162 576.2 821 49.7
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 7.7e-140 502.3 775 47.1
Carub.0008s1265 Capsella rubella HOM05D008661 ORTHO05D010872 3.2e-138 496.9 821 45.6
Sp6g14700 Schrenkiella parvula HOM05D008661 ORTHO05D010872 7.2e-130 469.2 839 42.9
BcaC04g20573 Brassica carinata HOM05D008661 ORTHO05D010872 3.1e-80 304.3 789 37.5
BcaB08g35607 Brassica carinata HOM05D008661 ORTHO05D010872 1.7e-75 288.5 831 35.5
BolC9t57083H Brassica oleracea HOM05D008661 ORTHO05D010872 3.9e-75 287.3 822 36.3
C09p42010 Brassica napus HOM05D008661 ORTHO05D010872 2.8e-73 281.2 822 35.8
BraA10t43090Z Brassica rapa HOM05D008661 ORTHO05D010872 1.9e-66 258.5 838 34.2
BcaC04g20572 Brassica carinata HOM05D008661 ORTHO05D010872 1.3e-62 245.7 749 35.1
C09p42020 Brassica napus HOM05D008661 ORTHO05D010872 7.1e-61 240.0 773 34.2
BolC9t57085H Brassica oleracea HOM05D008661 ORTHO05D010872 7.1e-61 240.0 773 34.2
BcaC04g20566 Brassica carinata HOM05D008661 ORTHO05D010872 1.3e-57 229.2 827 32.5
BraA10t43092Z Brassica rapa HOM05D008661 ORTHO05D010872 6.2e-57 226.9 818 33.5
A10p10120 Brassica napus HOM05D008661 ORTHO05D010872 1.1e-56 226.1 820 33.7
A10p10090 Brassica napus HOM05D008661 ORTHO05D010872 2.5e-50 204.9 836 31.9
A10p10100 Brassica napus HOM05D008661 ORTHO05D010872 1.1e-48 199.5 819 32.6
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 1.8e-40 172.2 971 28.8
A10p10130 Brassica napus HOM05D008661 ORTHO05D010872 8.8e-35 153.3 798 29.4
BraA10t43093Z Brassica rapa HOM05D008661 ORTHO05D010872 1.3e-33 149.4 798 29.2
BcaC04g20571 Brassica carinata HOM05D008661 ORTHO05D010872 5.9e-31 140.6 366 34.7
BolC9t57086H Brassica oleracea HOM05D008661 ORTHO05D010872 1.0e-30 139.8 816 28.7
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 1.1e-29 136.3 597 33.2
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 1.8e-27 129.0 575 31.8
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 2.6e-26 125.2 697 30.4
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 3.3e-26 124.8 1048 26.0
C09p42030 Brassica napus HOM05D008661 ORTHO05D010872 1.7e-25 122.5 481 33.1
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 1.1e-24 119.8 1045 26.1
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 1.4e-24 119.4 1045 26.1
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 1.9e-21 109.0 554 31.2
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 1.6e-20 105.9 344 30.2
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 4.7e-20 104.4 545 31.2
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 2.3e-19 102.1 600 30.7
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 2.3e-19 102.1 314 30.9
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 2.0e-18 99.0 360 30.8
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 2.6e-18 98.6 330 29.4
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 7.4e-18 97.1 549 31.9
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 1.3e-17 96.3 570 30.5
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 2.2e-17 95.5 339 29.5
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 3.7e-17 94.7 557 30.3
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 4.8e-17 94.4 336 30.4
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 4.8e-17 94.4 320 30.9
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 1.1e-16 93.2 362 26.0
Sp7g23720 Schrenkiella parvula HOM05D000481 ORTHO05D003804 1.4e-16 92.8 84 63.1
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 2.4e-16 92.0 333 31.2
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 5.3e-16 90.9 405 28.9
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 7.0e-16 90.5 342 27.5
AT4G25680 Arabidopsis thaliana HOM05D000481 ORTHO05D003804 9.1e-16 90.1 72 65.3
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 9.1e-16 90.1 326 30.7
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.2e-15 89.7 404 28.5
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 1.2e-15 89.7 437 27.5
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 1.6e-15 89.4 314 31.8
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 2.0e-15 89.0 340 31.5
Thhalv10026034m.g Eutrema salsugineum HOM05D000481 ORTHO05D003804 2.6e-15 88.6 123 45.5
Carub.0007s1528 Capsella rubella HOM05D000481 ORTHO05D003804 3.5e-15 88.2 84 60.7
C01p21200 Brassica napus HOM05D000481 ORTHO05D003804 4.5e-15 87.8 84 59.5
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 4.5e-15 87.8 313 29.1
A01p16920 Brassica napus HOM05D000481 ORTHO05D003804 5.9e-15 87.4 84 60.7
BraA01t01647Z Brassica rapa HOM05D000481 ORTHO05D003804 5.9e-15 87.4 84 59.5
Lsat_1_v5_gn_9_57440 Lactuca sativa HOM05D006627 ORTHO05D007753 5.9e-15 87.4 530 25.3
BcaNung07308 Brassica carinata HOM05D000481 ORTHO05D003804 1.3e-14 86.3 84 58.3
BolC1t02045H Brassica oleracea HOM05D000481 ORTHO05D003804 1.3e-14 86.3 84 58.3
Sp7g23700 Schrenkiella parvula HOM05D000481 ORTHO05D003804 1.7e-14 85.9 89 53.9
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.2e-14 85.5 338 29.9
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 3.8e-14 84.7 311 27.3
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 5.0e-14 84.3 406 28.1
BcaC04g20569 Brassica carinata HOM05D008661 ORTHO05D010872 6.5e-14 84.0 327 30.6
C08p09610 Brassica napus HOM05D000481 ORTHO05D003804 8.5e-14 83.6 72 62.5
BraA08t34054Z Brassica rapa HOM05D000481 ORTHO05D003804 8.5e-14 83.6 72 62.5
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.5e-14 83.6 407 28.5
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.5e-14 83.6 407 27.8
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 1.1e-13 83.2 417 31.7
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 1.1e-13 83.2 417 31.7
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 1.1e-13 83.2 417 31.7
AT4G25660 Arabidopsis thaliana HOM05D000481 ORTHO05D003804 1.5e-13 82.8 87 57.5
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 1.5e-13 82.8 1090 24.9
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.5e-13 82.8 331 29.3
BcaB03g12483 Brassica carinata HOM05D000481 ORTHO05D003804 1.9e-13 82.4 72 62.5
BcaC07g38206 Brassica carinata HOM05D000481 ORTHO05D003804 1.9e-13 82.4 95 54.7
BolC8t48629H Brassica oleracea HOM05D000481 ORTHO05D003804 1.9e-13 82.4 95 54.7
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 2.5e-13 82.0 396 24.7
BraA01t01644Z Brassica rapa HOM05D000481 ORTHO05D003804 2.5e-13 82.0 102 50.0
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.5e-13 82.0 406 27.8
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 3.2e-13 81.6 316 28.8
AL7G27400 Arabidopsis lyrata HOM05D000481 ORTHO05D003804 4.2e-13 81.3 106 48.1
A01p16940 Brassica napus HOM05D000481 ORTHO05D003804 9.4e-13 80.1 69 62.3
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 1.2e-12 79.7 347 27.4
Thhalv10026072m.g Eutrema salsugineum HOM05D000481 ORTHO05D003804 1.6e-12 79.3 110 48.2
BolC1t02048H Brassica oleracea HOM05D000481 ORTHO05D003804 2.7e-12 78.6 110 49.1
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 4.7e-12 77.8 337 26.1
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 4.7e-12 77.8 373 27.3
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 4.7e-12 77.8 563 28.2
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 6.1e-12 77.4 289 28.4
AL7G27420 Arabidopsis lyrata HOM05D000481 ORTHO05D003804 1.0e-11 76.6 90 53.3
Carub.0007s1531 Capsella rubella HOM05D000481 ORTHO05D003804 1.8e-11 75.9 87 54.0
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 1.8e-11 75.9 525 30.1
A08p21020 Brassica napus HOM05D000481 ORTHO05D003804 2.3e-11 75.5 95 51.6
C01p21220 Brassica napus HOM05D000481 ORTHO05D003804 4.0e-11 74.7 70 61.4
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 5.2e-11 74.3 344 25.6
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 6.8e-11 73.9 262 25.2
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 8.8e-11 73.6 398 27.9
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 8.8e-11 73.6 359 25.3
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 8.8e-11 73.6 387 24.3
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.2e-10 73.2 295 27.1
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.2e-10 73.2 295 27.1
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.5e-10 72.8 265 29.8
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 2.6e-10 72.0 306 28.1
BcaC04g20567 Brassica carinata HOM05D008661 ORTHO05D010872 2.6e-10 72.0 426 27.7
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 2.6e-10 72.0 358 26.8
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 2.6e-10 72.0 355 25.6
Atru.chr9.2148 Acer truncatum HOM05D006627 ORTHO05D007753 3.4e-10 71.6 152 38.2
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.4e-10 71.6 267 30.0
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 3.7e-09 68.2 375 24.3
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 3.7e-09 68.2 282 28.0
Os08g0430000 Oryza sativa ssp. japonica HOM05D006627 ORTHO05D007753 3.7e-09 68.2 471 25.3
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 6.3e-09 67.4 327 25.7
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 6.3e-09 67.4 308 29.9
AUR62031403 Chenopodium quinoa HOM05D006627 ORTHO05D007753 6.3e-09 67.4 344 27.9
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 6.3e-09 67.4 466 24.5
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 1.1e-08 66.6 292 26.4
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 1.4e-08 66.2 319 25.1
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 1.4e-08 66.2 491 24.6
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 3.1e-08 65.1 332 27.7
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 3.1e-08 65.1 302 30.1
TWI60G0847 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 9.1e-08 63.5 300 29.0
Aa31LG3G8910 Aethionema arabicum HOM05D000481 ORTHO05D003804 1.2e-07 63.2 72 50.0
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 2.0e-07 62.4 334 24.0
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 2.0e-07 62.4 352 24.1
THA.LOC104825111 Tarenaya hassleriana HOM05D000481 ORTHO05D003804 4.5e-07 61.2 84 48.8
CDE04G0350 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 7.7e-07 60.5 308 26.6
BcaNung07306 Brassica carinata HOM05D000481 ORTHO05D003804 1.7e-06 59.3 92 46.7
Glyma.09G132800 Glycine max HOM05D000481 ORTHO05D003804 1.7e-06 59.3 72 45.8
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 1.7e-06 59.3 313 24.0
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 2.2e-06 58.9 283 26.1
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 3.8e-06 58.2 293 29.0
ECA232G3189 Erigeron canadensis HOM05D006627 ORTHO05D007753 6.5e-06 57.4 814 25.6


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