Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p20650 Brassica napus HOM05D009587 ORTHO05D004912 1.3e-61 239.6 122 100.0
BcaC07g38259 Brassica carinata HOM05D009587 ORTHO05D004912 4.4e-54 214.5 122 92.6
C08p10050 Brassica napus HOM05D009587 ORTHO05D004912 2.9e-53 211.8 122 91.8
BolC8t48684H Brassica oleracea HOM05D009587 ORTHO05D004912 2.9e-53 211.8 122 91.8
BraA08t34019Z Brassica rapa HOM05D009587 ORTHO05D004912 3.0e-50 201.8 132 84.1
BcaB03g12516 Brassica carinata HOM05D009587 ORTHO05D004912 1.2e-43 179.9 128 78.9
Sp7g24900 Schrenkiella parvula HOM05D009587 ORTHO05D004912 5.1e-42 174.5 134 76.1
CARHR234560 Cardamine hirsuta HOM05D009587 ORTHO05D004912 7.6e-38 160.6 131 71.8
AT4G26960 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 2.5e-33 145.6 134 68.7
Carub.0007s1391 Capsella rubella HOM05D009587 ORTHO05D004912 3.3e-33 145.2 137 66.4
AL7G25880 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 2.7e-27 125.6 106 67.0
Aa31LG3G10880 Aethionema arabicum HOM05D009587 ORTHO05D004912 2.6e-22 109.0 126 52.4
Sp6g16920 Schrenkiella parvula HOM05D009587 ORTHO05D004912 3.4e-22 108.6 140 48.6
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 9.9e-22 107.1 128 57.8
BraA03t10733Z Brassica rapa HOM05D009587 ORTHO05D004912 1.7e-21 106.3 120 52.5
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 2.9e-21 105.5 135 54.1
CARHR268310 Cardamine hirsuta HOM05D009587 ORTHO05D004912 4.9e-21 104.8 136 51.5
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 1.1e-20 103.6 135 52.6
A03p14360 Brassica napus HOM05D009587 ORTHO05D004912 9.3e-20 100.5 120 51.7
C03p16740 Brassica napus HOM05D009587 ORTHO05D004912 9.3e-20 100.5 120 53.3
BolC3t14094H Brassica oleracea HOM05D009587 ORTHO05D004912 2.1e-19 99.4 120 52.5
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 3.5e-19 98.6 115 52.2
Aa31LG5G12020 Aethionema arabicum HOM05D009587 ORTHO05D004912 4.6e-19 98.2 129 52.7
AT5G54970 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 6.6e-18 94.4 122 49.2
Carub.0008s1526 Capsella rubella HOM05D009587 ORTHO05D004912 6.6e-18 94.4 133 48.9
AL8G30440 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 3.6e-16 88.6 133 43.6
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 1.1e-15 87.0 137 43.1
BcaB01g04338 Brassica carinata HOM05D009587 ORTHO05D004912 1.4e-15 86.7 121 50.4
Sp1g13240 Schrenkiella parvula HOM05D009587 ORTHO05D004912 5.3e-15 84.7 82 65.9
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 3.2e-12 75.5 128 43.0
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 1.2e-11 73.6 113 43.4
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.6e-11 73.2 139 40.3
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.1e-11 72.8 139 38.1
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.5e-11 72.0 139 38.1
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 2.3e-10 69.3 133 41.4
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 8.7e-10 67.4 130 40.8
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 3.7e-08 62.0 137 36.5
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 4.8e-08 61.6 140 37.9
BcaB01g04337 Brassica carinata HOM05D009587 ORTHO05D004912 8.1e-08 60.8 51 62.7
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 8.1e-08 60.8 137 35.0
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 4.0e-07 58.5 139 35.3
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.2e-06 57.0 138 34.8
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.5e-06 56.6 147 36.7
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 2.0e-06 56.2 127 39.4
Potri.006G052300 Populus trichocarpa HOM05D007398 ORTHO05D004912 2.0e-06 56.2 111 37.8
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 3.4e-06 55.5 126 36.5
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 3.4e-06 55.5 138 34.1


User provided reference genes

Program Settings