Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.2e-191 672.2 346 100.0
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.1e-187 659.8 346 97.7
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.9e-182 642.5 346 95.4
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 7.1e-182 640.6 346 95.1
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 6.0e-181 637.5 346 94.5
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.3e-175 619.8 345 90.7
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.9e-174 615.9 345 91.3
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.2e-173 613.2 344 90.1
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 2.3e-172 609.0 340 90.6
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.5e-171 605.5 341 89.7
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 4.9e-159 564.7 311 92.3
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 3.0e-148 528.9 341 79.2
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 3.1e-137 492.3 260 93.5
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 1.1e-134 483.8 319 77.1
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.1e-118 430.6 354 62.4
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 2.5e-118 429.5 353 62.6
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 4.2e-118 428.7 360 62.2
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.6e-117 426.8 358 61.7
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 2.1e-117 426.4 369 58.5
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 2.1e-117 426.4 355 63.1
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 2.7e-117 426.0 358 62.0
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 6.1e-117 424.9 394 56.3
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 6.1e-117 424.9 369 61.2
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.0e-116 424.1 381 59.3
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.4e-116 423.7 372 60.2
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 2.3e-116 422.9 370 59.5
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 5.2e-116 421.8 365 61.4
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 6.7e-116 421.4 371 59.3
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 8.8e-116 421.0 358 61.7
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.5e-115 420.2 373 59.2
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 1.5e-115 420.2 362 60.5
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 2.6e-115 419.5 372 59.1
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 2.6e-115 419.5 360 59.7
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 5.7e-115 418.3 346 62.4
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 5.7e-115 418.3 363 61.2
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 7.4e-115 417.9 376 59.3
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 7.4e-115 417.9 353 61.8
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 7.4e-115 417.9 362 60.2
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 2.2e-114 416.4 299 68.2
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 4.8e-114 415.2 360 58.6
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 6.3e-114 414.8 378 58.7
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 6.3e-114 414.8 371 59.6
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 8.2e-114 414.5 368 56.5
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.4e-113 413.7 365 60.3
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.4e-113 413.7 370 59.5
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 2.4e-113 412.9 362 59.7
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 7.0e-113 411.4 360 59.2
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 9.1e-113 411.0 367 58.6
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 5.9e-112 408.3 341 61.9
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 5.9e-112 408.3 365 58.4
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 5.0e-111 405.2 347 61.1
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.1e-110 404.1 325 63.7
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.9e-110 403.3 362 58.0
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 3.2e-110 402.5 363 57.3
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 3.2e-110 402.5 361 57.1
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 5.5e-110 401.7 286 71.0
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 5.5e-110 401.7 352 58.8
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 5.5e-110 401.7 361 57.9
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.6e-109 400.2 363 56.2
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.2e-107 394.0 360 56.7
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.0e-107 393.3 365 58.6
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.0e-107 393.3 368 57.9
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.3e-107 392.5 360 56.7
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 3.3e-107 392.5 393 53.7
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 4.4e-107 392.1 350 58.9
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 2.2e-106 389.8 372 55.4
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 4.8e-106 388.7 361 56.2
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 4.8e-106 388.7 357 57.7
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 2.4e-105 386.3 360 56.4
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 4.1e-105 385.6 427 49.6
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 7.0e-105 384.8 345 58.0
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 9.1e-105 384.4 346 57.5
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 9.1e-105 384.4 357 57.1
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 7.7e-104 381.3 363 53.7
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.7e-103 380.2 369 53.4
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 5.0e-103 378.6 370 55.7
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 6.5e-103 378.3 340 58.8
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.9e-102 376.7 372 54.0
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 7.2e-102 374.8 367 55.9
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 2.7e-101 372.9 342 57.6
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 3.0e-100 369.4 283 66.1
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 2.4e-97 359.8 329 56.2
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 4.1e-97 359.0 329 56.2
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 1.6e-96 357.1 289 62.6
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-94 350.9 269 66.5
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.5e-94 350.5 380 51.3
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 3.0e-92 342.8 277 62.5
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 4.4e-91 339.0 262 65.6
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.8e-89 333.6 359 53.2
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 3.8e-87 325.9 232 67.2
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 8.6e-87 324.7 338 51.8
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 2.5e-86 323.2 402 45.3
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.2e-85 320.9 333 52.0
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 2.0e-83 313.5 283 54.8
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 5.8e-83 312.0 357 47.6
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 9.8e-83 311.2 232 65.1
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.1e-81 307.8 270 57.8
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.4e-81 307.4 360 48.3
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 9.2e-81 304.7 213 70.4
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.6e-78 295.4 179 77.7
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.2e-77 294.3 308 53.2
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 3.7e-74 282.7 327 45.3
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 2.3e-71 273.5 171 76.0
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 5.2e-68 262.3 296 50.7
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 4.4e-67 259.2 282 48.6
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.6e-64 250.8 330 45.5
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 9.2e-57 224.9 225 52.9
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.2e-50 203.8 303 40.6
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.1e-46 191.4 193 56.5
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 6.2e-45 185.7 148 59.5
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.4e-44 184.5 300 38.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 3.1e-36 156.8 140 58.6
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 3.8e-34 149.8 185 45.4
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.5e-32 143.3 190 44.2
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 3.0e-23 113.6 71 80.3
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 2.2e-10 70.9 104 41.3
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 8.5e-10 68.9 48 66.7
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 8.5e-10 68.9 55 60.0


User provided reference genes

Program Settings