Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p19410 Brassica napus HOM05D000476 ORTHO05D021854 4.6e-36 154.1 79 100.0
C03p88880 Brassica napus HOM05D000476 ORTHO05D021854 9.0e-24 113.2 65 90.8
Thhalv10024537m.g Eutrema salsugineum HOM05D000476 ORTHO05D004987 4.2e-13 77.8 65 69.2
Sp7g27980 Schrenkiella parvula HOM05D000476 ORTHO05D004987 4.6e-12 74.3 68 66.2
Carub.0007s1048 Capsella rubella HOM05D000476 ORTHO05D004987 1.8e-11 72.4 69 63.8
AL7G22070 Arabidopsis lyrata HOM05D000476 ORTHO05D004987 1.5e-10 69.3 69 62.3
CARHR238030 Cardamine hirsuta HOM05D000476 ORTHO05D004987 1.9e-10 68.9 60 68.3
BcaC09g51792 Brassica carinata HOM05D000476 ORTHO05D004987 5.6e-10 67.4 64 65.6
A01p08010 Brassica napus HOM05D000476 ORTHO05D004987 5.6e-10 67.4 64 65.6
C01p08970 Brassica napus HOM05D000476 ORTHO05D004987 5.6e-10 67.4 64 65.6
BraA01t00746Z Brassica rapa HOM05D000476 ORTHO05D004987 5.6e-10 67.4 64 65.6
AT4G30130 Arabidopsis thaliana HOM05D000476 ORTHO05D004987 7.4e-10 67.0 68 60.3
Thhalv10022561m.g Eutrema salsugineum HOM05D000476 ORTHO05D004987 1.3e-09 66.2 69 58.0
Sp3g32490 Schrenkiella parvula HOM05D000476 ORTHO05D004987 1.6e-09 65.9 69 58.0
Aa31LG8G16150 Aethionema arabicum HOM05D000476 ORTHO05D004987 2.8e-09 65.1 68 58.8
BcaNung04413 Brassica carinata HOM05D000476 ORTHO05D004987 3.7e-09 64.7 69 65.2
Carub.0003s3333 Capsella rubella HOM05D000476 ORTHO05D004987 4.8e-09 64.3 69 56.5
AL3G52830 Arabidopsis lyrata HOM05D000476 ORTHO05D004987 6.2e-09 63.9 69 55.1
AT2G19090 Arabidopsis thaliana HOM05D000476 ORTHO05D004987 8.1e-09 63.5 69 56.5
BcaC06g36519 Brassica carinata HOM05D000476 ORTHO05D004987 1.4e-08 62.8 70 52.9
A07p01640 Brassica napus HOM05D000476 ORTHO05D004987 2.4e-08 62.0 70 52.9
C07p03400 Brassica napus HOM05D000476 ORTHO05D004987 2.4e-08 62.0 70 52.9
BolC7t40739H Brassica oleracea HOM05D000476 ORTHO05D004987 2.4e-08 62.0 70 52.9
BraA07t27966Z Brassica rapa HOM05D000476 ORTHO05D004987 2.4e-08 62.0 70 52.9
THA.LOC104814668 Tarenaya hassleriana HOM05D000476 ORTHO05D004987 3.1e-08 61.6 66 53.0
BcaB03g12632 Brassica carinata HOM05D000476 ORTHO05D004987 5.3e-08 60.8 40 75.0
Glyma.17G060600 Glycine max HOM05D000476 ORTHO05D004987 1.5e-07 59.3 79 44.3
BcaB03g16802 Brassica carinata HOM05D000476 ORTHO05D004987 2.0e-07 58.9 69 49.3
BcaC04g22868 Brassica carinata HOM05D000476 ORTHO05D004987 2.6e-07 58.5 69 50.7
BolC9t54348H Brassica oleracea HOM05D000476 ORTHO05D004987 2.6e-07 58.5 69 50.7
CARHR109610 Cardamine hirsuta HOM05D000476 ORTHO05D004987 3.4e-07 58.2 72 52.8
C09p14450 Brassica napus HOM05D000476 ORTHO05D004987 4.5e-07 57.8 69 50.7
BraA09t36866Z Brassica rapa HOM05D000476 ORTHO05D004987 4.5e-07 57.8 69 50.7
BolC1t00887H Brassica oleracea HOM05D000476 ORTHO05D004987 5.8e-07 57.4 58 56.9
Haze_21986 Corylus avellana HOM05D000476 ORTHO05D004987 9.9e-07 56.6 88 37.5
Haze_21989 Corylus avellana HOM05D000476 ORTHO05D004987 9.9e-07 56.6 88 37.5
TPR.G9019 Trifolium pratense HOM05D000476 ORTHO05D004987 1.3e-06 56.2 68 44.1
Sabra06G0058300 Salix brachista HOM05D000476 ORTHO05D004987 1.7e-06 55.8 88 38.6
Thecc.09G181300 Theobroma cacao HOM05D000476 ORTHO05D004987 1.7e-06 55.8 82 41.5
Cfa013432 Carpinus fangiana HOM05D000476 ORTHO05D004987 2.2e-06 55.5 88 36.4
Medtr2g036920 Medicago truncatula HOM05D000476 ORTHO05D004987 2.2e-06 55.5 68 44.1
arahy.Tifrunner.gnm1.ann1.QRCU7C Arachis hypogaea HOM05D000476 ORTHO05D004987 2.9e-06 55.1 68 48.5
Potri.006G077000 Populus trichocarpa HOM05D000476 ORTHO05D004987 2.9e-06 55.1 88 38.6
arahy.Tifrunner.gnm1.ann1.94TNN4 Arachis hypogaea HOM05D000476 ORTHO05D004987 3.8e-06 54.7 68 48.5
Lj6g0013002 Lotus japonicus HOM05D000476 ORTHO05D004987 3.8e-06 54.7 63 47.6
SalBow5G1589 Salvia bowleyana HOM05D000476 ORTHO05D004987 3.8e-06 54.7 81 40.7
BcaC01g01212 Brassica carinata HOM05D000476 ORTHO05D021854 4.9e-06 54.3 32 90.6
Glyma.13G099500 Glycine max HOM05D000476 ORTHO05D004987 6.4e-06 53.9 69 43.5


User provided reference genes

Program Settings