Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 1.5e-46 189.1 95 100.0
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 1.7e-45 185.7 95 98.9
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 1.7e-40 169.1 91 92.3
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 2.4e-39 165.2 91 87.9
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 3.4e-38 161.4 91 89.0
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 5.9e-38 160.6 91 87.9
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 2.9e-37 158.3 91 86.8
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 7.9e-35 150.2 93 80.6
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 5.2e-34 147.5 92 79.3
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 5.2e-34 147.5 92 79.3
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 2.6e-33 145.2 92 77.2
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 1.3e-32 142.9 92 77.2
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 6.3e-32 140.6 88 73.9
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 6.5e-29 130.6 89 80.9
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 1.0e-26 123.2 88 70.5
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 7.5e-25 117.1 84 67.9
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 9.7e-25 116.7 85 64.7
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 2.2e-24 115.5 84 65.5
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 6.3e-24 114.0 88 59.1
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 6.3e-24 114.0 84 64.3
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 6.3e-24 114.0 84 63.1
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 8.2e-24 113.6 84 64.3
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.4e-23 112.8 83 65.1
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.8e-23 112.5 83 65.1
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 2.4e-23 112.1 84 59.5
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 3.1e-23 111.7 82 65.9
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 3.1e-23 111.7 84 63.1
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 3.1e-23 111.7 84 61.9
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 4.1e-23 111.3 84 60.7
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 4.1e-23 111.3 84 63.1
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 5.3e-23 110.9 84 60.7
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 5.3e-23 110.9 88 56.8
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 9.1e-23 110.2 84 63.1
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 9.1e-23 110.2 84 61.9
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 9.1e-23 110.2 84 63.1
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 1.2e-22 109.8 82 63.4
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 5.9e-22 107.5 84 60.7
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 5.9e-22 107.5 84 59.5
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 1.3e-21 106.3 88 59.1
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.7e-21 105.9 84 59.5
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.7e-21 105.9 84 59.5
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 2.2e-21 105.5 78 65.4
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 2.2e-21 105.5 88 60.2
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 2.2e-21 105.5 83 56.6
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 2.2e-21 105.5 82 61.0
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 3.8e-21 104.8 85 54.1
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 5.0e-21 104.4 82 61.0
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 8.5e-21 103.6 88 54.5
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 1.1e-20 103.2 85 57.6
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 1.5e-20 102.8 79 64.6
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 1.5e-20 102.8 85 54.1
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 3.2e-20 101.7 78 64.1
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 9.4e-20 100.1 88 55.7
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 9.4e-20 100.1 78 64.1
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 1.6e-19 99.4 97 50.5
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 4.7e-19 97.8 82 59.8
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 6.1e-19 97.4 88 52.3
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 1.0e-18 96.7 82 57.3
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 1.4e-18 96.3 52 86.5
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 1.4e-18 96.3 88 51.1
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 2.3e-18 95.5 82 57.3
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 4.0e-18 94.7 84 52.4
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 1.5e-17 92.8 82 56.1
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 2.6e-17 92.0 83 54.2
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 7.5e-17 90.5 74 59.5
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 1.3e-16 89.7 114 46.5
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 1.3e-16 89.7 75 60.0
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 2.8e-16 88.6 59 81.4
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 4.8e-16 87.8 79 58.2
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 3.1e-15 85.1 80 52.5
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 2.7e-14 82.0 100 47.0
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 3.6e-11 71.6 84 41.7
Mapoly0013s0068 Marchantia polymorpha HOM05D008013 ORTHO05D010149 2.6e-09 65.5 82 37.8
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 6.3e-08 60.8 47 57.4
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 1.8e-07 59.3 43 55.8
ATR0609G113 Amborella trichopoda HOM05D008013 ORTHO05D010149 4.1e-07 58.2 49 53.1
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 5.4e-07 57.8 48 52.1
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 7.0e-07 57.4 43 62.8
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 2.0e-06 55.8 44 54.5
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 2.0e-06 55.8 48 54.2
Cre12.g484300 Chlamydomonas reinhardtii HOM05D008013 ORTHO05D010149 7.8e-06 53.9 80 36.2


User provided reference genes

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