Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 1.3e-94 349.7 183 100.0
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 6.3e-89 330.9 184 96.7
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 3.0e-83 312.0 186 92.5
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 9.8e-82 307.0 188 91.0
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 6.3e-81 304.3 190 89.5
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 5.9e-79 297.7 182 89.6
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.7e-78 296.2 187 89.8
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.1e-77 293.5 186 88.7
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 9.5e-77 290.4 184 88.0
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 2.8e-76 288.9 183 88.5
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 3.0e-75 285.4 188 86.7
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.7e-70 269.6 188 78.7
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 3.3e-69 265.4 189 79.4
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 4.3e-69 265.0 183 80.3
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 4.3e-69 265.0 183 80.3
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 4.3e-69 265.0 184 81.0
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 5.6e-69 264.6 183 80.3
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 5.6e-69 264.6 186 76.3
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 1.2e-68 263.5 182 79.7
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.6e-68 263.1 178 82.6
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 2.1e-68 262.7 183 79.8
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.8e-68 262.3 189 77.2
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 3.6e-68 261.9 186 78.5
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.2e-66 256.9 183 76.5
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 8.9e-59 230.7 210 67.1
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 2.0e-58 229.6 194 69.1
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 2.6e-58 229.2 187 70.1
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 5.8e-58 228.0 141 85.1
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 1.7e-57 226.5 141 87.2
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 2.2e-57 226.1 173 74.6
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 2.9e-57 225.7 180 71.1
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 6.4e-57 224.6 190 67.4
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 6.4e-57 224.6 151 82.8
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 8.3e-57 224.2 144 84.0
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 8.3e-57 224.2 143 86.7
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 1.1e-56 223.8 143 85.3
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 1.1e-56 223.8 164 76.2
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 1.4e-56 223.4 199 65.3
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.4e-56 223.4 142 83.8
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.4e-56 223.4 142 83.8
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.9e-56 223.0 141 83.0
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.9e-56 223.0 143 82.5
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 3.2e-56 222.2 139 85.6
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 7.1e-56 221.1 167 73.1
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 9.2e-56 220.7 141 84.4
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 9.2e-56 220.7 143 85.3
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.2e-55 220.3 166 72.9
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 1.2e-55 220.3 138 84.1
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 1.2e-55 220.3 141 85.1
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 2.1e-55 219.5 194 66.5
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.7e-55 219.2 140 84.3
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 2.7e-55 219.2 140 84.3
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 3.5e-55 218.8 142 82.4
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 3.5e-55 218.8 141 84.4
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 4.6e-55 218.4 200 66.0
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 4.6e-55 218.4 166 72.3
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 4.6e-55 218.4 140 84.3
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.6e-55 218.4 143 80.4
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 4.6e-55 218.4 141 83.0
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 4.6e-55 218.4 198 64.6
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 4.6e-55 218.4 141 83.7
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 7.8e-55 217.6 189 68.3
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 7.8e-55 217.6 139 82.7
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.0e-54 217.2 142 82.4
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 1.3e-54 216.9 141 83.7
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 1.3e-54 216.9 145 79.3
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.7e-54 216.5 139 82.0
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 2.3e-54 216.1 141 83.0
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.3e-54 216.1 151 78.8
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 3.0e-54 215.7 142 81.7
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 3.0e-54 215.7 140 82.9
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 3.9e-54 215.3 140 84.3
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 6.6e-54 214.5 138 81.2
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 6.6e-54 214.5 137 81.8
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 6.6e-54 214.5 157 73.9
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 8.6e-54 214.2 165 72.7
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 1.1e-53 213.8 168 73.8
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 1.1e-53 213.8 149 77.9
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.1e-53 213.8 182 68.7
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.5e-53 213.4 146 80.8
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.9e-53 213.0 147 81.6
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 1.9e-53 213.0 140 84.3
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 3.3e-53 212.2 137 81.0
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 3.3e-53 212.2 141 80.1
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 3.3e-53 212.2 135 83.0
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 3.3e-53 212.2 166 70.5
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.3e-53 211.8 140 82.1
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.3e-53 211.8 140 82.1
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 4.3e-53 211.8 140 82.1
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 4.3e-53 211.8 138 81.9
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 5.6e-53 211.5 137 81.0
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 5.6e-53 211.5 137 82.5
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 7.3e-53 211.1 137 81.0
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 9.5e-53 210.7 143 79.7
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 9.5e-53 210.7 137 80.3
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 9.5e-53 210.7 187 66.8
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 1.2e-52 210.3 140 80.0
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.2e-52 210.3 168 73.2
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 1.2e-52 210.3 174 70.1
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 1.2e-52 210.3 145 78.6
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.6e-52 209.9 145 80.0
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 2.8e-52 209.1 139 79.9
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 2.8e-52 209.1 141 79.4
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 2.8e-52 209.1 140 80.0
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 4.7e-52 208.4 187 66.3
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 6.2e-52 208.0 154 76.0
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 1.1e-51 207.2 145 75.9
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.1e-51 207.2 195 62.6
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.1e-51 207.2 140 81.4
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.4e-51 206.8 141 80.1
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.8e-51 206.5 170 71.2
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 3.1e-51 205.7 179 65.9
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 3.1e-51 205.7 145 77.9
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 4.0e-51 205.3 142 76.1
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 5.2e-51 204.9 144 77.1
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 5.2e-51 204.9 140 77.1
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 8.9e-51 204.1 115 92.2
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 8.9e-51 204.1 148 75.7
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 3.4e-50 202.2 149 73.8
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 4.4e-50 201.8 140 77.1
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 7.6e-50 201.1 115 88.7
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 7.6e-50 201.1 115 88.7
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 1.7e-49 199.9 159 73.0
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 2.9e-49 199.1 145 75.2
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 3.8e-49 198.7 182 64.3
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 4.9e-49 198.4 113 90.3
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 6.4e-49 198.0 115 88.7
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 7.1e-48 194.5 112 89.3
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 1.6e-47 193.4 139 74.8
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 2.1e-47 193.0 113 86.7
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 2.1e-47 193.0 145 71.7
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 3.5e-47 192.2 142 73.2
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.8e-44 182.6 184 58.7
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 1.1e-43 180.6 137 66.4
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 4.0e-43 178.7 198 56.6
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.5e-42 176.8 138 68.1
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.0e-42 176.4 172 59.3
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 3.4e-42 175.6 111 82.0
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 2.9e-41 172.6 122 75.4
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 2.9e-41 172.6 109 78.0
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 4.2e-40 168.7 135 69.6
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 7.1e-40 167.9 133 68.4
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.3e-40 167.5 170 60.0
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.3e-40 167.5 170 60.0
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 3.5e-39 165.6 142 59.9
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 8.7e-38 161.0 152 65.1
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 8.7e-38 161.0 148 65.5
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 1.3e-36 157.1 111 71.2
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 4.8e-36 155.2 151 64.9
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 6.2e-36 154.8 113 69.9
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 8.1e-36 154.5 130 63.8
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 4.0e-35 152.1 156 62.2
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 9.0e-35 151.0 145 62.1
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 1.3e-33 147.1 327 36.4
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 5.1e-30 135.2 109 62.4
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 9.9e-26 120.9 122 60.7
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 9.9e-26 120.9 91 74.7
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.1e-24 117.5 86 75.6
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 1.9e-24 116.7 132 50.8
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 3.2e-24 115.9 91 72.5
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 3.2e-24 115.9 87 77.0
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 2.1e-23 113.2 87 75.9
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 2.1e-23 113.2 87 75.9
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.5e-21 107.1 72 81.9
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.9e-21 106.7 75 78.7
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.9e-16 90.1 47 95.7
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 1.9e-16 90.1 85 58.8
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 9.3e-16 87.8 49 89.8
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 9.7e-13 77.8 44 88.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 8.5e-09 64.7 38 84.2
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.0e-06 56.2 116 37.1
AagrBONN_evm.TU.Sc2ySwM_114.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.0e-06 56.2 116 37.1
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.0e-06 56.2 116 37.1
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.0e-06 56.2 116 37.1
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.9e-06 55.8 83 47.0
AagrBONN_evm.TU.Sc2ySwM_340.1461 Anthoceros agrestis HOM05D010958 ORTHO05D004381 5.1e-06 55.5 90 43.3


User provided reference genes

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