Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 0.0e+00 1168.3 583 100.0
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 0.0e+00 1159.8 583 99.1
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 0.0e+00 1131.3 588 96.8
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 0.0e+00 1129.8 583 96.4
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 0.0e+00 1129.4 588 96.8
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 0.0e+00 1129.0 588 96.6
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 0.0e+00 1107.8 588 93.4
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 0.0e+00 1101.7 588 93.2
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 0.0e+00 1099.0 588 92.5
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 0.0e+00 1097.4 588 92.9
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 0.0e+00 1093.6 588 91.7
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 0.0e+00 1079.3 589 92.2
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 0.0e+00 1079.3 589 92.0
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 0.0e+00 1078.9 589 92.7
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 6.1e-303 1043.5 584 88.0
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 1.5e-301 1038.9 589 87.9
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 1.1e-299 1032.7 589 88.8
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 3.2e-275 951.4 583 78.9
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 7.0e-275 950.3 583 79.4
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 1.2e-274 949.5 583 78.9
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 2.0e-274 948.7 584 78.8
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 2.3e-273 945.3 585 79.1
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 2.9e-273 944.9 587 78.5
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 8.6e-273 943.3 585 78.8
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 2.5e-272 941.8 588 78.7
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 4.3e-272 941.0 584 79.8
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 3.1e-270 934.9 543 82.0
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 4.0e-270 934.5 583 78.4
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 6.8e-270 933.7 583 78.2
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.5e-269 932.6 583 78.4
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 2.0e-269 932.2 583 77.7
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 3.4e-269 931.4 584 77.7
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 4.4e-269 931.0 587 77.9
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 1.7e-268 929.1 583 78.2
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 2.2e-268 928.7 551 80.4
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 1.9e-267 925.6 585 77.3
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 3.2e-267 924.9 546 80.4
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 4.1e-267 924.5 583 77.9
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 5.4e-267 924.1 583 77.4
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 4.6e-266 921.0 547 79.7
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 1.0e-265 919.8 583 76.7
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 1.0e-265 919.8 546 81.3
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 1.7e-265 919.1 542 81.2
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 3.0e-265 918.3 584 76.2
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 4.3e-264 914.4 586 77.1
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 5.6e-264 914.1 618 73.3
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 9.5e-264 913.3 583 76.5
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 1.2e-263 912.9 547 80.1
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 4.7e-263 911.0 468 95.3
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 8.0e-263 910.2 552 79.2
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 1.1e-262 909.8 552 79.2
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 1.8e-262 909.1 586 74.9
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 1.2e-261 906.4 548 78.3
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 4.4e-261 904.4 583 75.6
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 1.7e-260 902.5 548 78.6
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 1.7e-260 902.5 548 78.3
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 4.9e-260 901.0 527 81.8
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 6.4e-260 900.6 588 75.9
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 3.2e-259 898.3 522 82.4
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 3.2e-259 898.3 586 74.9
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 5.4e-259 897.5 577 75.7
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 9.2e-259 896.7 522 82.2
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 1.6e-258 896.0 542 79.5
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 7.8e-258 893.6 542 79.5
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 1.0e-257 893.3 584 75.5
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 1.3e-257 892.9 544 78.7
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 1.3e-257 892.9 525 81.1
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 3.0e-257 891.7 522 80.8
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 3.9e-257 891.3 547 77.3
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 1.1e-256 889.8 521 80.6
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 2.5e-256 888.6 588 73.0
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 4.3e-256 887.9 549 78.1
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 5.6e-256 887.5 542 78.8
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 9.5e-256 886.7 540 78.3
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 1.2e-255 886.3 587 74.6
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 2.1e-255 885.6 583 75.0
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 1.8e-254 882.5 541 78.0
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 4.4e-253 877.9 583 73.6
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 7.6e-253 877.1 570 74.2
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 3.7e-252 874.8 508 82.9
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 2.7e-250 868.6 535 78.3
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 3.5e-250 868.2 521 80.2
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 4.6e-250 867.8 686 64.9
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 1.0e-249 866.7 584 72.9
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 1.0e-249 866.7 584 72.9
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 3.0e-249 865.1 577 73.0
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 3.9e-249 864.8 596 71.8
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 9.6e-248 860.1 541 76.7
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 1.2e-245 853.2 522 78.7
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 1.3e-244 849.7 544 74.4
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 4.9e-244 847.8 546 75.5
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 4.2e-243 844.7 521 77.9
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 2.8e-239 832.0 583 70.5
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 8.1e-239 830.5 542 74.7
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 5.4e-235 817.8 565 72.2
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 2.3e-233 812.4 500 79.8
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 1.6e-231 806.2 542 71.4
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 2.8e-231 805.4 567 68.6
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 4.8e-231 804.7 501 79.0
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.4e-229 798.5 521 75.6
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 3.5e-226 788.5 468 80.6
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 1.0e-225 786.9 469 80.2
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 1.3e-223 780.0 542 69.0
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 7.9e-218 760.8 439 82.9
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 1.0e-217 760.4 443 83.3
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 5.1e-217 758.1 544 69.3
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 7.6e-213 744.2 468 77.1
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 7.9e-202 707.6 542 64.2
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 3.3e-192 675.6 544 60.1
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 9.4e-187 657.5 464 69.0
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 3.5e-173 612.5 552 55.8
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 3.8e-172 609.0 583 56.8
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 1.3e-167 594.0 534 56.7
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 2.0e-152 543.5 461 57.7
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 1.2e-149 534.3 523 53.0
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 1.5e-139 500.7 332 73.5
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 1.7e-127 460.7 259 83.4
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 1.2e-88 331.6 254 63.8
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 2.3e-76 290.8 158 84.2
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 1.8e-57 228.0 490 31.0
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 1.8e-44 184.9 122 79.5
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 8.0e-37 159.5 208 45.7
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 3.5e-32 144.1 90 77.8
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.1e-25 122.5 538 23.0
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 4.0e-20 104.0 65 69.2
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 8.4e-18 96.3 76 61.8
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 8.7e-07 59.7 378 23.0
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 1.1e-06 59.3 30 86.7


User provided reference genes

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