Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p16150 Brassica napus HOM05D007942 ORTHO05D010045 1.1e-43 179.5 88 100.0
C03p84680 Brassica napus HOM05D007942 ORTHO05D010045 7.3e-43 176.8 86 100.0
BolC3t20755H Brassica oleracea HOM05D007942 ORTHO05D010045 7.3e-43 176.8 86 100.0
BcaC01g00815 Brassica carinata HOM05D007942 ORTHO05D010045 2.9e-39 164.9 86 94.2
Thhalv10026690m.g Eutrema salsugineum HOM05D007942 ORTHO05D010045 7.1e-30 133.7 88 77.3
AL7G29970 Arabidopsis lyrata HOM05D007942 ORTHO05D010045 1.2e-29 132.9 88 76.1
A01p14720 Brassica napus HOM05D007942 ORTHO05D010045 4.6e-29 131.0 88 72.7
BraA01t01411Z Brassica rapa HOM05D007942 ORTHO05D010045 4.6e-29 131.0 88 72.7
C01p18220 Brassica napus HOM05D007942 ORTHO05D010045 3.0e-28 128.3 88 70.5
BolC1t01748H Brassica oleracea HOM05D007942 ORTHO05D010045 3.0e-28 128.3 88 70.5
BcaB03g11761 Brassica carinata HOM05D007942 ORTHO05D010045 3.9e-28 127.9 88 76.1
BcaB03g11762 Brassica carinata HOM05D007942 ORTHO05D010045 3.9e-28 127.9 88 76.1
CARHR230820 Cardamine hirsuta HOM05D007942 ORTHO05D010045 6.7e-28 127.1 88 70.5
BcaNung01050 Brassica carinata HOM05D007942 ORTHO05D010045 7.4e-27 123.6 88 70.5
Carub.0007s1768 Capsella rubella HOM05D007942 ORTHO05D010045 7.4e-27 123.6 88 71.6
BcaC09g50992 Brassica carinata HOM05D007942 ORTHO05D010045 2.1e-26 122.1 88 69.3
AT4G23493 Arabidopsis thaliana HOM05D007942 ORTHO05D010045 2.8e-26 121.7 89 73.0
Aa31LG6G6680 Aethionema arabicum HOM05D007942 ORTHO05D010045 2.5e-22 108.6 86 67.4
THA.LOC104814669 Tarenaya hassleriana HOM05D007942 ORTHO05D010045 2.6e-16 88.6 78 59.0
BraA08t33585Z Brassica rapa HOM05D007942 ORTHO05D010045 1.0e-15 86.7 43 97.7
Glyma.01G221800 Glycine max HOM05D007942 ORTHO05D010045 3.9e-12 74.7 79 48.1
Nitab4.5_0000769g0190 Nicotiana tabacum HOM05D007942 ORTHO05D010045 1.2e-08 63.2 64 50.0
vmacro13966 Vaccinium macrocarpon HOM05D007942 ORTHO05D010045 1.2e-08 63.2 74 45.9
Nitab4.5_0002282g0090 Nicotiana tabacum HOM05D007942 ORTHO05D010045 1.5e-08 62.8 77 46.8
Lsat_1_v5_gn_6_85240 Lactuca sativa HOM05D007942 ORTHO05D010045 2.6e-08 62.0 76 43.4
Lalb_Chr05g0211711 Lupinus albus HOM05D007942 ORTHO05D010045 2.6e-08 62.0 59 54.2
Ciclev10023096m.g Citrus clementina HOM05D007942 ORTHO05D010045 3.4e-08 61.6 77 45.5
DCAR_004614 Daucus carota HOM05D007942 ORTHO05D010045 3.4e-08 61.6 57 56.1
Gohir.A08G115301 Gossypium hirsutum HOM05D007942 ORTHO05D010045 3.4e-08 61.6 79 41.8
Lsat_1_v5_gn_6_85200 Lactuca sativa HOM05D007942 ORTHO05D010045 4.5e-08 61.2 60 46.7
Psat2g183000 Pisum sativum HOM05D007942 ORTHO05D010045 4.5e-08 61.2 81 38.3
ECA240G3258 Erigeron canadensis HOM05D007942 ORTHO05D010045 7.7e-08 60.5 86 39.5
PGSC0003DMG400012189 Solanum tuberosum HOM05D007942 ORTHO05D010045 1.0e-07 60.1 79 43.0
GSVIVG01019402001 Vitis vinifera HOM05D007942 ORTHO05D010045 1.7e-07 59.3 49 53.1
SGA_v2.0_scaffold111G31481 Striga asiatica HOM05D007942 ORTHO05D010045 2.9e-07 58.5 79 39.2
MD06G1089100 Malus domestica HOM05D007942 ORTHO05D010045 3.8e-07 58.2 82 43.9
Gorai.004G139100 Gossypium raimondii HOM05D007942 ORTHO05D010045 5.0e-07 57.8 61 44.3
Solyc08g081455.1 Solanum lycopersicum HOM05D007942 ORTHO05D010045 5.0e-07 57.8 79 40.5
HanXRQChr13g0415991 Helianthus annuus HOM05D007942 ORTHO05D010045 6.5e-07 57.4 61 44.3
Sopen08g029790 Solanum pennellii HOM05D007942 ORTHO05D010045 1.1e-06 56.6 63 42.9
AUR62010730 Chenopodium quinoa HOM05D007942 ORTHO05D010045 1.4e-06 56.2 65 38.5
Cc03_g15820 Coffea canephora HOM05D007942 ORTHO05D010045 1.9e-06 55.8 64 43.8
Cc08_g15120 Coffea canephora HOM05D007942 ORTHO05D010045 1.9e-06 55.8 64 43.8
Peaxi162Scf00074g01832 Petunia axillaris HOM05D007942 ORTHO05D010045 1.9e-06 55.8 62 43.5
Ca_24542_v3 Cicer arietinum L. HOM05D007942 ORTHO05D010045 2.5e-06 55.5 81 35.8
Hund11441 Selenicereus undatus HOM05D007942 ORTHO05D010045 2.5e-06 55.5 64 40.6


User provided reference genes

Program Settings